RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ELL2O00472 640 aaPredicted RBP19.23■□□□□ 0.67
PCDHA3-202ENST00000532566 GLIPR1L2Q4G1C9 344 aa19.22■□□□□ 0.67
PCDHA3-202ENST00000532566 SCAPERQ9BY12 1400 aa19.22■□□□□ 0.67
PCDHA3-202ENST00000532566 PPP2R1AP30153 589 aa19.22■□□□□ 0.67
PCDHA3-202ENST00000532566 FAM69CQ0P6D2 419 aa19.22■□□□□ 0.67
PCDHA3-202ENST00000532566 SLC4A10Q6U841 1118 aa19.21■□□□□ 0.67
PCDHA3-202ENST00000532566 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
PCDHA3-202ENST00000532566 CCDC141Q6ZP82 1450 aa19.21■□□□□ 0.67
PCDHA3-202ENST00000532566 CDCA7LQ96GN5 454 aa19.2■□□□□ 0.66
PCDHA3-202ENST00000532566 ZRSR1Q15695 479 aaKnown RBP19.2■□□□□ 0.66
PCDHA3-202ENST00000532566 GBP4Q96PP9 640 aa19.2■□□□□ 0.66
PCDHA3-202ENST00000532566 NCOA1Q15788 1441 aa19.19■□□□□ 0.66
PCDHA3-202ENST00000532566 RIPK4P57078 832 aa19.18■□□□□ 0.66
PCDHA3-202ENST00000532566 KIAA1211Q6ZU35 1233 aa19.18■□□□□ 0.66
PCDHA3-202ENST00000532566 LTV1Q96GA3 475 aaPredicted RBP19.18■□□□□ 0.66
PCDHA3-202ENST00000532566 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
PCDHA3-202ENST00000532566 CSB-PGBD3P0DP91 1061 aa19.17■□□□□ 0.66
PCDHA3-202ENST00000532566 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.17■□□□□ 0.66
PCDHA3-202ENST00000532566 CABP2Q9NPB3 220 aa19.17■□□□□ 0.66
PCDHA3-202ENST00000532566 MTHFSP49914 203 aa19.17■□□□□ 0.66
PCDHA3-202ENST00000532566 DDX19BQ9UMR2 479 aa19.17■□□□□ 0.66
PCDHA3-202ENST00000532566 DZIP1LQ8IYY4 767 aaKnown RBP19.16■□□□□ 0.66
PCDHA3-202ENST00000532566 ZNF608Q9ULD9 1512 aaPredicted RBP19.16■□□□□ 0.66
PCDHA3-202ENST00000532566 ERBINQ96RT1 1412 aa19.16■□□□□ 0.66
PCDHA3-202ENST00000532566 C11orf95C9JLR9 678 aaPredicted RBP19.15■□□□□ 0.66
PCDHA3-202ENST00000532566 HDAC5Q9UQL6 1122 aa19.15■□□□□ 0.66
PCDHA3-202ENST00000532566 RPRD2Q5VT52 1461 aaKnown RBP19.13■□□□□ 0.65
PCDHA3-202ENST00000532566 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
PCDHA3-202ENST00000532566 PTMSP20962 102 aa19.13■□□□□ 0.65
PCDHA3-202ENST00000532566 TCP11L2Q8N4U5 519 aa19.13■□□□□ 0.65
PCDHA3-202ENST00000532566 KIF14Q15058 1648 aa19.12■□□□□ 0.65
PCDHA3-202ENST00000532566 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
PCDHA3-202ENST00000532566 PLCB2Q00722 1185 aa19.12■□□□□ 0.65
PCDHA3-202ENST00000532566 ANKRD45Q5TZF3 282 aa19.12■□□□□ 0.65
PCDHA3-202ENST00000532566 NAP1L2Q9ULW6 460 aaPredicted RBP19.11■□□□□ 0.65
PCDHA3-202ENST00000532566 GOLGA6L4A6NEF3 574 aa19.11■□□□□ 0.65
PCDHA3-202ENST00000532566 SMG6Q86US8 1419 aaKnown RBP19.1■□□□□ 0.65
PCDHA3-202ENST00000532566 TRIM6-TRIM34B2RNG4 842 aa19.1■□□□□ 0.65
PCDHA3-202ENST00000532566 DNTTIP2Q5QJE6 756 aaKnown RBP19.1■□□□□ 0.65
PCDHA3-202ENST00000532566 GZF1Q9H116 711 aaPredicted RBP19.1■□□□□ 0.65
PCDHA3-202ENST00000532566 SLC12A5Q9H2X9 1139 aa19.1■□□□□ 0.65
PCDHA3-202ENST00000532566 KIF16BQ96L93 1317 aa19.1■□□□□ 0.65
PCDHA3-202ENST00000532566 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
PCDHA3-202ENST00000532566 AAMPQ13685 434 aa19.1■□□□□ 0.65
PCDHA3-202ENST00000532566 MAPKBP1O60336 1514 aa19.09■□□□□ 0.65
PCDHA3-202ENST00000532566 PTPRKQ15262 1439 aa19.09■□□□□ 0.65
PCDHA3-202ENST00000532566 API5Q9BZZ5 524 aaKnown RBP19.08■□□□□ 0.65
PCDHA3-202ENST00000532566 PANK1Q8TE04 598 aa19.08■□□□□ 0.64
PCDHA3-202ENST00000532566 NAP1L5Q96NT1 182 aaPredicted RBP19.07■□□□□ 0.64
PCDHA3-202ENST00000532566 GNAI1P63096 354 aa19.07■□□□□ 0.64
PCDHA3-202ENST00000532566 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
PCDHA3-202ENST00000532566 UGGT2Q9NYU1 1516 aa19.05■□□□□ 0.64
PCDHA3-202ENST00000532566 HMOX1P09601 288 aa19.05■□□□□ 0.64
PCDHA3-202ENST00000532566 GPATCH3Q96I76 525 aa19.04■□□□□ 0.64
PCDHA3-202ENST00000532566 PRAM1Q96QH2 718 aa19.03■□□□□ 0.64
PCDHA3-202ENST00000532566 GPATCH8Q9UKJ3 1502 aaKnown RBP19.03■□□□□ 0.64
PCDHA3-202ENST00000532566 RPGRIP1LQ68CZ1 1315 aa19.03■□□□□ 0.64
PCDHA3-202ENST00000532566 TAOK2Q9UL54 1235 aa19.03■□□□□ 0.64
PCDHA3-202ENST00000532566 RAPGEF3O95398 923 aa19.02■□□□□ 0.64
PCDHA3-202ENST00000532566 ST18O60284 1047 aa19.02■□□□□ 0.63
PCDHA3-202ENST00000532566 NPHP1O15259 732 aa19.01■□□□□ 0.63
PCDHA3-202ENST00000532566 TEFQ10587 303 aa19.01■□□□□ 0.63
PCDHA3-202ENST00000532566 ZNF330Q9Y3S2 320 aaPredicted RBP19.01■□□□□ 0.63
PCDHA3-202ENST00000532566 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
PCDHA3-202ENST00000532566 PDE3AQ14432 1141 aa19■□□□□ 0.63
PCDHA3-202ENST00000532566 GOLGA6L3A6NEY3 463 aa19■□□□□ 0.63
PCDHA3-202ENST00000532566 CTTNBP2Q8WZ74 1663 aa18.99■□□□□ 0.63
PCDHA3-202ENST00000532566 MSNP26038 577 aaKnown RBP18.98■□□□□ 0.63
PCDHA3-202ENST00000532566 C1orf141Q5JVX7 400 aa18.97■□□□□ 0.63
PCDHA3-202ENST00000532566 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
PCDHA3-202ENST00000532566 PRKAR2BP31323 418 aa18.96■□□□□ 0.63
PCDHA3-202ENST00000532566 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
PCDHA3-202ENST00000532566 LNPKQ9C0E8 428 aa18.96■□□□□ 0.63
PCDHA3-202ENST00000532566 CHMP3Q9Y3E7 222 aa18.96■□□□□ 0.63
PCDHA3-202ENST00000532566 EXOSC9Q06265 439 aaKnown RBP18.95■□□□□ 0.62
PCDHA3-202ENST00000532566 BCAR3O75815 825 aa18.95■□□□□ 0.62
PCDHA3-202ENST00000532566 SYAP1Q96A49 352 aaPredicted RBP18.95■□□□□ 0.62
PCDHA3-202ENST00000532566 DDX11L8A8MPP1 907 aa18.94■□□□□ 0.62
PCDHA3-202ENST00000532566 RILPL2Q969X0 211 aa18.94■□□□□ 0.62
PCDHA3-202ENST00000532566 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
PCDHA3-202ENST00000532566 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
PCDHA3-202ENST00000532566 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
PCDHA3-202ENST00000532566 CDK19Q9BWU1 502 aa18.93■□□□□ 0.62
PCDHA3-202ENST00000532566 CABP1Q9NZU7 370 aa18.93■□□□□ 0.62
PCDHA3-202ENST00000532566 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
PCDHA3-202ENST00000532566 FKBP5Q13451 457 aaPredicted RBP18.93■□□□□ 0.62
PCDHA3-202ENST00000532566 GORABQ5T7V8 394 aa18.92■□□□□ 0.62
PCDHA3-202ENST00000532566 GOLGA6L6A8MZA4 724 aa18.92■□□□□ 0.62
PCDHA3-202ENST00000532566 ADGRL1O94910 1474 aa18.92■□□□□ 0.62
PCDHA3-202ENST00000532566 PSME1Q06323 249 aa18.92■□□□□ 0.62
PCDHA3-202ENST00000532566 GSE1Q14687 1217 aa18.92■□□□□ 0.62
PCDHA3-202ENST00000532566 EIF2S2P20042 333 aaKnown RBP18.91■□□□□ 0.62
PCDHA3-202ENST00000532566 REC8O95072 547 aa18.91■□□□□ 0.62
PCDHA3-202ENST00000532566 ATAD2Q6PL18 1390 aa18.91■□□□□ 0.62
PCDHA3-202ENST00000532566 NRDCO43847 1150 aa18.91■□□□□ 0.62
PCDHA3-202ENST00000532566 ATP10BO94823 1461 aa18.91■□□□□ 0.62
PCDHA3-202ENST00000532566 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
PCDHA3-202ENST00000532566 TXNDC2Q86VQ3 553 aa18.9■□□□□ 0.62
PCDHA3-202ENST00000532566 NECTIN2Q92692 538 aa18.9■□□□□ 0.62
PCDHA3-202ENST00000532566 TSR2Q969E8 191 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms