RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 TMUB1Q9BVT8 246 aa7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 AMOTL2Q9Y2J4 779 aa7.02□□□□□ -1.29
AC055878.1-201ENST00000531858 GRXCR2A6NFK2 248 aa7.01□□□□□ -1.29
AC055878.1-201ENST00000531858 SOCS7O14512 581 aa7.01□□□□□ -1.29
AC055878.1-201ENST00000531858 DSG2Q14126 1118 aa7.01□□□□□ -1.29
AC055878.1-201ENST00000531858 COG6Q9Y2V7 657 aa7.01□□□□□ -1.29
AC055878.1-201ENST00000531858 IRF5Q13568 498 aa7□□□□□ -1.29
AC055878.1-201ENST00000531858 POM121Q96HA1 1249 aa7□□□□□ -1.29
AC055878.1-201ENST00000531858 GPCPD1Q9NPB8 672 aa7□□□□□ -1.29
AC055878.1-201ENST00000531858 ZNF330Q9Y3S2 320 aaPredicted RBP7□□□□□ -1.29
AC055878.1-201ENST00000531858 LOC105371045A0A1W2PR82 267 aa6.99□□□□□ -1.29
AC055878.1-201ENST00000531858 BRD1O95696 1058 aa6.99□□□□□ -1.29
AC055878.1-201ENST00000531858 PTGDRQ13258 359 aa6.99□□□□□ -1.29
AC055878.1-201ENST00000531858 Q6ZNB5 142 aa6.99□□□□□ -1.29
AC055878.1-201ENST00000531858 KCNK17Q96T54 332 aa6.99□□□□□ -1.29
AC055878.1-201ENST00000531858 KDM4FA0A1W2PPD8 638 aa6.98□□□□□ -1.29
AC055878.1-201ENST00000531858 RBM25P49756 843 aaKnown RBP6.98□□□□□ -1.29
AC055878.1-201ENST00000531858 MAP3K9P80192 1104 aa6.98□□□□□ -1.29
AC055878.1-201ENST00000531858 TMEM259Q4ZIN3 620 aa6.98□□□□□ -1.29
AC055878.1-201ENST00000531858 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.98□□□□□ -1.29
AC055878.1-201ENST00000531858 USTQ9Y2C2 406 aa6.98□□□□□ -1.29
AC055878.1-201ENST00000531858 FECHP22830 423 aa6.97□□□□□ -1.29
AC055878.1-201ENST00000531858 DIXDC1Q155Q3 683 aa6.97□□□□□ -1.29
AC055878.1-201ENST00000531858 PTCD2Q8WV60 388 aaKnown RBP6.97□□□□□ -1.29
AC055878.1-201ENST00000531858 PRM3Q9NNZ6 103 aa6.97□□□□□ -1.29
AC055878.1-201ENST00000531858 VPS9D1Q9Y2B5 631 aa6.97□□□□□ -1.29
AC055878.1-201ENST00000531858 THSD4Q6ZMP0 1018 aa6.96□□□□□ -1.3
AC055878.1-201ENST00000531858 GOLGA8CPA6NN73 597 aa6.95□□□□□ -1.3
AC055878.1-201ENST00000531858 IGSF3O75054 1194 aa6.95□□□□□ -1.3
AC055878.1-201ENST00000531858 SSTR3P32745 418 aaPredicted RBP6.95□□□□□ -1.3
AC055878.1-201ENST00000531858 REPIN1Q9BWE0 567 aaKnown RBP6.95□□□□□ -1.3
AC055878.1-201ENST00000531858 FOXD4L5Q5VV16 416 aaPredicted RBP6.94□□□□□ -1.3
AC055878.1-201ENST00000531858 PLPP6Q8IY26 295 aa6.94□□□□□ -1.3
AC055878.1-201ENST00000531858 FOXD4L4Q8WXT5 416 aaPredicted RBP6.94□□□□□ -1.3
AC055878.1-201ENST00000531858 TBC1D12O60347 775 aa6.93□□□□□ -1.3
AC055878.1-201ENST00000531858 CALR3Q96L12 384 aaKnown RBP6.93□□□□□ -1.3
AC055878.1-201ENST00000531858 BEGAINQ9BUH8 593 aa6.93□□□□□ -1.3
AC055878.1-201ENST00000531858 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
AC055878.1-201ENST00000531858 WNT2BQ93097 391 aa6.92□□□□□ -1.3
AC055878.1-201ENST00000531858 PBXIP1Q96AQ6 731 aa6.92□□□□□ -1.3
AC055878.1-201ENST00000531858 RFC5P40937 340 aa6.91□□□□□ -1.3
AC055878.1-201ENST00000531858 CLK2P49760 499 aaKnown RBP6.91□□□□□ -1.3
AC055878.1-201ENST00000531858 PPP2R2DQ66LE6 453 aa6.91□□□□□ -1.3
AC055878.1-201ENST00000531858 SLC4A5Q9BY07 1137 aa6.91□□□□□ -1.3
AC055878.1-201ENST00000531858 ATP1B4Q9UN42 357 aaPredicted RBP6.91□□□□□ -1.3
AC055878.1-201ENST00000531858 MDM2Q00987 491 aaPredicted RBP6.9□□□□□ -1.3
AC055878.1-201ENST00000531858 TUSC1Q2TAM9 212 aa6.9□□□□□ -1.3
AC055878.1-201ENST00000531858 MYSM1Q5VVJ2 828 aa6.9□□□□□ -1.3
AC055878.1-201ENST00000531858 MRPL50Q8N5N7 158 aaKnown RBP6.9□□□□□ -1.3
AC055878.1-201ENST00000531858 FAM217BQ9NTX9 383 aaPredicted RBP6.9□□□□□ -1.3
AC055878.1-201ENST00000531858 CSB-PGBD3P0DP91 1061 aa6.89□□□□□ -1.31
AC055878.1-201ENST00000531858 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
AC055878.1-201ENST00000531858 SNRKQ9NRH2 765 aa6.89□□□□□ -1.31
AC055878.1-201ENST00000531858 POLR3EQ9NVU0 708 aa6.89□□□□□ -1.31
AC055878.1-201ENST00000531858 OATP04181 439 aa6.88□□□□□ -1.31
AC055878.1-201ENST00000531858 HSP90B1P14625 803 aaKnown RBP6.88□□□□□ -1.31
AC055878.1-201ENST00000531858 LAPTM4AQ15012 233 aa6.88□□□□□ -1.31
AC055878.1-201ENST00000531858 GLMNQ92990 594 aa6.88□□□□□ -1.31
AC055878.1-201ENST00000531858 BHMG1C9JSJ3 638 aaPredicted RBP6.87□□□□□ -1.31
AC055878.1-201ENST00000531858 DDX12PQ92771 950 aa6.87□□□□□ -1.31
AC055878.1-201ENST00000531858 NBPF3Q9H094 633 aa6.87□□□□□ -1.31
AC055878.1-201ENST00000531858 BCL2L12Q9HB09 334 aa6.87□□□□□ -1.31
AC055878.1-201ENST00000531858 ITGBL1O95965 494 aaPredicted RBP6.86□□□□□ -1.31
AC055878.1-201ENST00000531858 SND1Q7KZF4 910 aaKnown RBP eCLIP6.86□□□□□ -1.31
AC055878.1-201ENST00000531858 ZNF454Q8N9F8 522 aa6.86□□□□□ -1.31
AC055878.1-201ENST00000531858 GDPD2Q9HCC8 539 aa6.86□□□□□ -1.31
AC055878.1-201ENST00000531858 MTMR14Q8NCE2 650 aa6.85□□□□□ -1.31
AC055878.1-201ENST00000531858 ZNF428Q96B54 188 aa6.85□□□□□ -1.31
AC055878.1-201ENST00000531858 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
AC055878.1-201ENST00000531858 EPAS1Q99814 870 aa6.85□□□□□ -1.31
AC055878.1-201ENST00000531858 PTPREP23469 700 aa6.84□□□□□ -1.31
AC055878.1-201ENST00000531858 NPDC1Q9NQX5 325 aaPredicted RBP6.84□□□□□ -1.31
AC055878.1-201ENST00000531858 GJA5P36382 358 aa6.83□□□□□ -1.32
AC055878.1-201ENST00000531858 RSPH4AQ5TD94 716 aa6.83□□□□□ -1.32
AC055878.1-201ENST00000531858 ZBED2Q9BTP6 218 aa6.83□□□□□ -1.32
AC055878.1-201ENST00000531858 TBC1D2Q9BYX2 928 aa6.83□□□□□ -1.32
AC055878.1-201ENST00000531858 EVI5O60447 810 aa6.82□□□□□ -1.32
AC055878.1-201ENST00000531858 PRIM1P49642 420 aaKnown RBP6.82□□□□□ -1.32
AC055878.1-201ENST00000531858 EN1Q05925 392 aaPredicted RBP6.82□□□□□ -1.32
AC055878.1-201ENST00000531858 WASHC4Q2M389 1173 aa6.82□□□□□ -1.32
AC055878.1-201ENST00000531858 B4GALNT3Q6L9W6 998 aa6.82□□□□□ -1.32
AC055878.1-201ENST00000531858 PHOX2BQ99453 314 aa6.82□□□□□ -1.32
AC055878.1-201ENST00000531858 PHF14O94880 888 aa6.81□□□□□ -1.32
AC055878.1-201ENST00000531858 ERCC3P19447 782 aa6.81□□□□□ -1.32
AC055878.1-201ENST00000531858 SRPK2P78362 688 aaKnown RBP6.81□□□□□ -1.32
AC055878.1-201ENST00000531858 TRAF7Q6Q0C0 670 aa6.81□□□□□ -1.32
AC055878.1-201ENST00000531858 METTL3Q86U44 580 aaKnown RBP6.81□□□□□ -1.32
AC055878.1-201ENST00000531858 ANKK1Q8NFD2 765 aa6.81□□□□□ -1.32
AC055878.1-201ENST00000531858 CERKQ8TCT0 537 aa6.81□□□□□ -1.32
AC055878.1-201ENST00000531858 ANO8Q9HCE9 1232 aaPredicted RBP6.81□□□□□ -1.32
AC055878.1-201ENST00000531858 ABL2P42684 1182 aa6.8□□□□□ -1.32
AC055878.1-201ENST00000531858 UPF1Q92900 1129 aaKnown RBP eCLIP6.8□□□□□ -1.32
AC055878.1-201ENST00000531858 GNEQ9Y223 722 aaKnown RBP6.8□□□□□ -1.32
AC055878.1-201ENST00000531858 SPTLC1O15269 473 aa6.79□□□□□ -1.32
AC055878.1-201ENST00000531858 IVNS1ABPQ9Y6Y0 642 aa6.79□□□□□ -1.32
AC055878.1-201ENST00000531858 RBM47A0AV96 593 aaKnown RBP6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 POM121CA8CG34 1229 aa6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 CDK11BP21127 795 aaKnown RBP6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 FOSBP53539 338 aa6.78□□□□□ -1.32
AC055878.1-201ENST00000531858 CFAP70Q5T0N1 1121 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms