RNA–Protein interactions for RNA: ENST00000531687.1

THUMPD2-209, Transcript of THUMP domain containing 2, humanhuman

TSL 3

Gene THUMPD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-209ENST00000531687 TRIM52Q96A61 297 aa25.21■■□□□ 1.63
THUMPD2-209ENST00000531687 NWD1Q149M9 1564 aa25.2■■□□□ 1.62
THUMPD2-209ENST00000531687 KIF1BO60333 1816 aa25.2■■□□□ 1.62
THUMPD2-209ENST00000531687 LRRC7Q96NW7 1537 aa25.19■■□□□ 1.62
THUMPD2-209ENST00000531687 CHGAP10645 457 aaKnown RBP25.18■■□□□ 1.62
THUMPD2-209ENST00000531687 DIP2AQ14689 1571 aa25.18■■□□□ 1.62
THUMPD2-209ENST00000531687 HDGFP51858 240 aaKnown RBP25.17■■□□□ 1.62
THUMPD2-209ENST00000531687 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.16■■□□□ 1.62
THUMPD2-209ENST00000531687 SLC4A1APQ9BWU0 796 aaKnown RBP25.16■■□□□ 1.62
THUMPD2-209ENST00000531687 ACIN1Q9UKV3 1341 aaKnown RBP25.15■■□□□ 1.62
THUMPD2-209ENST00000531687 SETD5Q9C0A6 1442 aa25.15■■□□□ 1.62
THUMPD2-209ENST00000531687 PPP1R15AO75807 674 aaPredicted RBP25.14■■□□□ 1.62
THUMPD2-209ENST00000531687 XIRP1Q702N8 1843 aaKnown RBP25.14■■□□□ 1.61
THUMPD2-209ENST00000531687 NKTRP30414 1462 aaKnown RBP25.13■■□□□ 1.61
THUMPD2-209ENST00000531687 CHD2O14647 1828 aaKnown RBP25.11■■□□□ 1.61
THUMPD2-209ENST00000531687 NEXMIFQ5QGS0 1516 aa25.11■■□□□ 1.61
THUMPD2-209ENST00000531687 UBAP1LF5GYI3 381 aa25.1■■□□□ 1.61
THUMPD2-209ENST00000531687 SLC26A8Q96RN1 970 aa25.1■■□□□ 1.61
THUMPD2-209ENST00000531687 SETBP1Q9Y6X0 1596 aa25.1■■□□□ 1.61
THUMPD2-209ENST00000531687 ALKQ9UM73 1620 aa25.09■■□□□ 1.61
THUMPD2-209ENST00000531687 NRXN3Q9Y4C0 1643 aa25.09■■□□□ 1.61
THUMPD2-209ENST00000531687 ADAMTS13Q76LX8 1427 aa25.09■■□□□ 1.61
THUMPD2-209ENST00000531687 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
THUMPD2-209ENST00000531687 KCNA6P17658 529 aa25.06■■□□□ 1.6
THUMPD2-209ENST00000531687 BCANQ96GW7 911 aa25.06■■□□□ 1.6
THUMPD2-209ENST00000531687 MPHOSPH9Q99550 1183 aa25.03■■□□□ 1.6
THUMPD2-209ENST00000531687 TBX22Q9Y458 520 aa25.03■■□□□ 1.6
THUMPD2-209ENST00000531687 PIK3R4Q99570 1358 aa25.03■■□□□ 1.6
THUMPD2-209ENST00000531687 TOM1O60784 492 aa25.02■■□□□ 1.6
THUMPD2-209ENST00000531687 ZNF326Q5BKZ1 582 aaKnown RBP25.02■■□□□ 1.6
THUMPD2-209ENST00000531687 NUTM2DQ5VT03 806 aaPredicted RBP25.02■■□□□ 1.6
THUMPD2-209ENST00000531687 PPLO60437 1756 aa25.02■■□□□ 1.6
THUMPD2-209ENST00000531687 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
THUMPD2-209ENST00000531687 TMEM94Q12767 1356 aa24.99■■□□□ 1.59
THUMPD2-209ENST00000531687 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
THUMPD2-209ENST00000531687 FOXD1Q16676 465 aa24.98■■□□□ 1.59
THUMPD2-209ENST00000531687 IFT172Q9UG01 1749 aa24.97■■□□□ 1.59
THUMPD2-209ENST00000531687 SETD1AO15047 1707 aaKnown RBP24.95■■□□□ 1.59
THUMPD2-209ENST00000531687 SPATA31E1Q6ZUB1 1445 aa24.94■■□□□ 1.58
THUMPD2-209ENST00000531687 RPGRIP1LQ68CZ1 1315 aa24.93■■□□□ 1.58
THUMPD2-209ENST00000531687 PROSER2Q86WR7 435 aaPredicted RBP24.93■■□□□ 1.58
THUMPD2-209ENST00000531687 SCAF1Q9H7N4 1312 aaKnown RBP24.91■■□□□ 1.58
THUMPD2-209ENST00000531687 PIP4K2BP78356 416 aa24.91■■□□□ 1.58
THUMPD2-209ENST00000531687 PTPRUQ92729 1446 aa24.91■■□□□ 1.58
THUMPD2-209ENST00000531687 NCOA3Q9Y6Q9 1424 aa24.91■■□□□ 1.58
THUMPD2-209ENST00000531687 HRCP23327 699 aa24.9■■□□□ 1.58
THUMPD2-209ENST00000531687 VGFO15240 615 aaPredicted RBP24.89■■□□□ 1.58
THUMPD2-209ENST00000531687 MSH6P52701 1360 aa24.87■■□□□ 1.57
THUMPD2-209ENST00000531687 METP08581 1390 aa24.86■■□□□ 1.57
THUMPD2-209ENST00000531687 ANKRD30BQ9BXX2 1392 aa24.83■■□□□ 1.57
THUMPD2-209ENST00000531687 RBM33Q96EV2 1170 aaKnown RBP24.83■■□□□ 1.57
THUMPD2-209ENST00000531687 AMOTL2Q9Y2J4 779 aa24.83■■□□□ 1.57
THUMPD2-209ENST00000531687 ROBO1Q9Y6N7 1651 aa24.82■■□□□ 1.56
THUMPD2-209ENST00000531687 PRAG1Q86YV5 1406 aa24.82■■□□□ 1.56
THUMPD2-209ENST00000531687 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.82■■□□□ 1.56
THUMPD2-209ENST00000531687 HSPA1LP34931 641 aa24.81■■□□□ 1.56
THUMPD2-209ENST00000531687 FAM135BQ49AJ0 1406 aa24.8■■□□□ 1.56
THUMPD2-209ENST00000531687 PTCH1Q13635 1447 aa24.78■■□□□ 1.56
THUMPD2-209ENST00000531687 MYOM2P54296 1465 aa24.78■■□□□ 1.56
THUMPD2-209ENST00000531687 DCCP43146 1447 aa24.78■■□□□ 1.56
THUMPD2-209ENST00000531687 TRIM26Q12899 539 aaPredicted RBP24.77■■□□□ 1.56
THUMPD2-209ENST00000531687 NALCNQ8IZF0 1738 aa24.77■■□□□ 1.56
THUMPD2-209ENST00000531687 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
THUMPD2-209ENST00000531687 LAMC1P11047 1609 aa24.76■■□□□ 1.55
THUMPD2-209ENST00000531687 RGL3Q3MIN7 710 aa24.76■■□□□ 1.55
THUMPD2-209ENST00000531687 ADGRF5Q8IZF2 1346 aa24.74■■□□□ 1.55
THUMPD2-209ENST00000531687 NRXN1Q9ULB1 1477 aa24.74■■□□□ 1.55
THUMPD2-209ENST00000531687 ADGRL3Q9HAR2 1447 aa24.73■■□□□ 1.55
THUMPD2-209ENST00000531687 C14orf37Q86TY3 774 aa24.73■■□□□ 1.55
THUMPD2-209ENST00000531687 KNDC1Q76NI1 1749 aa24.72■■□□□ 1.55
THUMPD2-209ENST00000531687 ASXL1Q8IXJ9 1541 aa24.72■■□□□ 1.55
THUMPD2-209ENST00000531687 C19orf44Q9H6X5 657 aa24.72■■□□□ 1.55
THUMPD2-209ENST00000531687 CADPS2Q86UW7 1296 aa24.69■■□□□ 1.54
THUMPD2-209ENST00000531687 MED1Q15648 1581 aaPredicted RBP24.68■■□□□ 1.54
THUMPD2-209ENST00000531687 SLAIN2Q9P270 581 aa24.68■■□□□ 1.54
THUMPD2-209ENST00000531687 ROBO2Q9HCK4 1378 aa24.67■■□□□ 1.54
THUMPD2-209ENST00000531687 TECPR2O15040 1411 aa24.67■■□□□ 1.54
THUMPD2-209ENST00000531687 PHLPP1O60346 1717 aa24.66■■□□□ 1.54
THUMPD2-209ENST00000531687 ATF3P18847 181 aa24.66■■□□□ 1.54
THUMPD2-209ENST00000531687 DISP3Q9P2K9 1392 aa24.65■■□□□ 1.54
THUMPD2-209ENST00000531687 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.53
THUMPD2-209ENST00000531687 MST1RQ04912 1400 aa24.63■■□□□ 1.53
THUMPD2-209ENST00000531687 LRPPRCP42704 1394 aaKnown RBP24.63■■□□□ 1.53
THUMPD2-209ENST00000531687 COL16A1Q07092 1604 aaPredicted RBP24.62■■□□□ 1.53
THUMPD2-209ENST00000531687 CDC42BPGQ6DT37 1551 aa24.61■■□□□ 1.53
THUMPD2-209ENST00000531687 NHSL1Q5SYE7 1610 aa24.59■■□□□ 1.53
THUMPD2-209ENST00000531687 YTHDC2Q9H6S0 1430 aaKnown RBP24.59■■□□□ 1.53
THUMPD2-209ENST00000531687 ABCC11Q96J66 1382 aa24.58■■□□□ 1.53
THUMPD2-209ENST00000531687 C14orf93Q9H972 538 aaKnown RBP24.58■■□□□ 1.53
THUMPD2-209ENST00000531687 ADGRB1O14514 1584 aa24.55■■□□□ 1.52
THUMPD2-209ENST00000531687 STAC3Q96MF2 364 aa24.55■■□□□ 1.52
THUMPD2-209ENST00000531687 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
THUMPD2-209ENST00000531687 TMEM132EQ6IEE7 984 aa24.53■■□□□ 1.52
THUMPD2-209ENST00000531687 DLC1Q96QB1 1528 aa24.52■■□□□ 1.52
THUMPD2-209ENST00000531687 BRINP3Q76B58 766 aa24.52■■□□□ 1.52
THUMPD2-209ENST00000531687 SHPRHQ149N8 1683 aa24.51■■□□□ 1.51
THUMPD2-209ENST00000531687 CFAP70Q5T0N1 1121 aa24.51■■□□□ 1.51
THUMPD2-209ENST00000531687 C1orf167Q5SNV9 1468 aa24.51■■□□□ 1.51
THUMPD2-209ENST00000531687 STK26Q9P289 416 aa24.5■■□□□ 1.51
THUMPD2-209ENST00000531687 DCAF11Q8TEB1 546 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms