RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 RUFY1Q96T51 708 aa17.87■□□□□ 0.45
LRRK1-207ENST00000531270 FHAD1B1AJZ9 1412 aa17.87■□□□□ 0.45
LRRK1-207ENST00000531270 TRDNQ13061 729 aa17.87■□□□□ 0.45
LRRK1-207ENST00000531270 R3HCC1Q9Y3T6 440 aaKnown RBP17.86■□□□□ 0.45
LRRK1-207ENST00000531270 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
LRRK1-207ENST00000531270 ZKSCAN1P17029 563 aaPredicted RBP17.86■□□□□ 0.45
LRRK1-207ENST00000531270 COG3Q96JB2 828 aa17.86■□□□□ 0.45
LRRK1-207ENST00000531270 HNRNPMP52272 730 aaKnown RBP eCLIP17.85■□□□□ 0.45
LRRK1-207ENST00000531270 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
LRRK1-207ENST00000531270 EFCAB2Q5VUJ9 269 aa17.85■□□□□ 0.45
LRRK1-207ENST00000531270 PAF1Q8N7H5 531 aa17.85■□□□□ 0.45
LRRK1-207ENST00000531270 RUFY2Q8WXA3 655 aa17.85■□□□□ 0.45
LRRK1-207ENST00000531270 SKIDA1Q1XH10 827 aa17.85■□□□□ 0.45
LRRK1-207ENST00000531270 VSIG10Q8N0Z9 540 aa17.84■□□□□ 0.45
LRRK1-207ENST00000531270 HOOK1Q9UJC3 728 aaKnown RBP17.84■□□□□ 0.45
LRRK1-207ENST00000531270 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
LRRK1-207ENST00000531270 VPS37CA5D8V6 355 aaPredicted RBP17.84■□□□□ 0.45
LRRK1-207ENST00000531270 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
LRRK1-207ENST00000531270 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
LRRK1-207ENST00000531270 TEX35Q5T0J7 233 aa17.82■□□□□ 0.44
LRRK1-207ENST00000531270 EPS15P42566 896 aa17.82■□□□□ 0.44
LRRK1-207ENST00000531270 TMEM132AQ24JP5 1023 aa17.82■□□□□ 0.44
LRRK1-207ENST00000531270 AK7Q96M32 723 aa17.81■□□□□ 0.44
LRRK1-207ENST00000531270 TIMELESSQ9UNS1 1208 aa17.81■□□□□ 0.44
LRRK1-207ENST00000531270 SKOR2Q2VWA4 1001 aaPredicted RBP17.81■□□□□ 0.44
LRRK1-207ENST00000531270 TTLL5Q6EMB2 1281 aa17.81■□□□□ 0.44
LRRK1-207ENST00000531270 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.81■□□□□ 0.44
LRRK1-207ENST00000531270 IKQ13123 557 aaPredicted RBP17.81■□□□□ 0.44
LRRK1-207ENST00000531270 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
LRRK1-207ENST00000531270 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
LRRK1-207ENST00000531270 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
LRRK1-207ENST00000531270 FAM13BQ9NYF5 915 aa17.8■□□□□ 0.44
LRRK1-207ENST00000531270 NLRP13Q86W25 1043 aa17.8■□□□□ 0.44
LRRK1-207ENST00000531270 G3BP1Q13283 466 aaKnown RBP eCLIP17.8■□□□□ 0.44
LRRK1-207ENST00000531270 SASS6Q6UVJ0 657 aa17.79■□□□□ 0.44
LRRK1-207ENST00000531270 PDILTQ8N807 584 aa17.79■□□□□ 0.44
LRRK1-207ENST00000531270 CDR1P51861 262 aa17.78■□□□□ 0.44
LRRK1-207ENST00000531270 OFD1O75665 1012 aa17.78■□□□□ 0.44
LRRK1-207ENST00000531270 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
LRRK1-207ENST00000531270 ANKRD30AQ9BXX3 1397 aa17.78■□□□□ 0.44
LRRK1-207ENST00000531270 TSHZ2Q9NRE2 1034 aa17.78■□□□□ 0.44
LRRK1-207ENST00000531270 NEUROD6Q96NK8 337 aa17.78■□□□□ 0.44
LRRK1-207ENST00000531270 PANK3Q9H999 370 aa17.77■□□□□ 0.44
LRRK1-207ENST00000531270 MNS1Q8NEH6 495 aa17.77■□□□□ 0.44
LRRK1-207ENST00000531270 SAFBQ15424 915 aaKnown RBP eCLIP17.77■□□□□ 0.43
LRRK1-207ENST00000531270 WASHC4Q2M389 1173 aa17.77■□□□□ 0.43
LRRK1-207ENST00000531270 IFT57Q9NWB7 429 aa17.77■□□□□ 0.43
LRRK1-207ENST00000531270 CRBNQ96SW2 442 aa17.77■□□□□ 0.43
LRRK1-207ENST00000531270 CENPQQ7L2Z9 268 aaPredicted RBP17.76■□□□□ 0.43
LRRK1-207ENST00000531270 CUX2O14529 1486 aa17.76■□□□□ 0.43
LRRK1-207ENST00000531270 RNF20Q5VTR2 975 aa17.76■□□□□ 0.43
LRRK1-207ENST00000531270 CAGE1Q8TC20 777 aa17.76■□□□□ 0.43
LRRK1-207ENST00000531270 MINK1Q8N4C8 1332 aaPredicted RBP17.76■□□□□ 0.43
LRRK1-207ENST00000531270 REC8O95072 547 aa17.75■□□□□ 0.43
LRRK1-207ENST00000531270 MAP7D2Q96T17 732 aa17.75■□□□□ 0.43
LRRK1-207ENST00000531270 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
LRRK1-207ENST00000531270 AIMP1Q12904 312 aaKnown RBP17.75■□□□□ 0.43
LRRK1-207ENST00000531270 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
LRRK1-207ENST00000531270 FKBP5Q13451 457 aaPredicted RBP17.75■□□□□ 0.43
LRRK1-207ENST00000531270 PDE4AP27815 886 aa17.75■□□□□ 0.43
LRRK1-207ENST00000531270 DDX58O95786 925 aaKnown RBP17.74■□□□□ 0.43
LRRK1-207ENST00000531270 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
LRRK1-207ENST00000531270 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
LRRK1-207ENST00000531270 EXOC6Q8TAG9 804 aa17.74■□□□□ 0.43
LRRK1-207ENST00000531270 PSME1Q06323 249 aa17.74■□□□□ 0.43
LRRK1-207ENST00000531270 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
LRRK1-207ENST00000531270 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
LRRK1-207ENST00000531270 L3MBTL2Q969R5 705 aa17.74■□□□□ 0.43
LRRK1-207ENST00000531270 GSE1Q14687 1217 aa17.73■□□□□ 0.43
LRRK1-207ENST00000531270 KANK4Q5T7N3 995 aaPredicted RBP17.73■□□□□ 0.43
LRRK1-207ENST00000531270 CARMIL2Q6F5E8 1435 aa17.73■□□□□ 0.43
LRRK1-207ENST00000531270 CCDC73Q6ZRK6 1079 aa17.73■□□□□ 0.43
LRRK1-207ENST00000531270 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
LRRK1-207ENST00000531270 CCAR1Q8IX12 1150 aaKnown RBP17.71■□□□□ 0.43
LRRK1-207ENST00000531270 CCDC173Q0VFZ6 552 aa17.71■□□□□ 0.43
LRRK1-207ENST00000531270 PPP1R1BQ9UD71 204 aaPredicted RBP17.71■□□□□ 0.43
LRRK1-207ENST00000531270 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
LRRK1-207ENST00000531270 PLCD4Q9BRC7 762 aa17.7■□□□□ 0.42
LRRK1-207ENST00000531270 CGNL1Q0VF96 1302 aa17.7■□□□□ 0.42
LRRK1-207ENST00000531270 WWC2Q6AWC2 1192 aa17.7■□□□□ 0.42
LRRK1-207ENST00000531270 BRMS1Q9HCU9 246 aa17.7■□□□□ 0.42
LRRK1-207ENST00000531270 HSP90B2PQ58FF3 399 aa17.7■□□□□ 0.42
LRRK1-207ENST00000531270 ATP2B1P20020 1258 aa17.69■□□□□ 0.42
LRRK1-207ENST00000531270 RIC3Q7Z5B4 369 aa17.69■□□□□ 0.42
LRRK1-207ENST00000531270 ACBD3Q9H3P7 528 aa17.69■□□□□ 0.42
LRRK1-207ENST00000531270 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
LRRK1-207ENST00000531270 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
LRRK1-207ENST00000531270 E9PSI1 815 aa17.69■□□□□ 0.42
LRRK1-207ENST00000531270 ARGLU1Q9NWB6 273 aaPredicted RBP17.69■□□□□ 0.42
LRRK1-207ENST00000531270 MYBBP1AQ9BQG0 1328 aaKnown RBP17.68■□□□□ 0.42
LRRK1-207ENST00000531270 RIPK4P57078 832 aa17.68■□□□□ 0.42
LRRK1-207ENST00000531270 KIF15Q9NS87 1388 aa17.68■□□□□ 0.42
LRRK1-207ENST00000531270 ST20-MTHFSA0A0A6YYL1 179 aa17.67■□□□□ 0.42
LRRK1-207ENST00000531270 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
LRRK1-207ENST00000531270 EVC2Q86UK5 1308 aa17.66■□□□□ 0.42
LRRK1-207ENST00000531270 H0YHG0 523 aa17.66■□□□□ 0.42
LRRK1-207ENST00000531270 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
LRRK1-207ENST00000531270 APAF1O14727 1248 aa17.66■□□□□ 0.42
LRRK1-207ENST00000531270 BRPF1P55201 1214 aaPredicted RBP17.66■□□□□ 0.42
LRRK1-207ENST00000531270 NUTM2GQ5VZR2 741 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms