RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CEP170BQ9Y4F5 1589 aaPredicted RBP15.3■□□□□ 0.04
SOX6-213ENST00000530378 A2ML1A8K2U0 1454 aa15.3■□□□□ 0.04
SOX6-213ENST00000530378 NLRP1Q9C000 1473 aa15.3■□□□□ 0.04
SOX6-213ENST00000530378 NEXMIFQ5QGS0 1516 aa15.29■□□□□ 0.04
SOX6-213ENST00000530378 SETD1BQ9UPS6 1966 aaKnown RBP15.28■□□□□ 0.04
SOX6-213ENST00000530378 ZNF142P52746 1687 aaPredicted RBP15.28■□□□□ 0.04
SOX6-213ENST00000530378 NEURL4Q96JN8 1562 aa15.28■□□□□ 0.04
SOX6-213ENST00000530378 PPP1R15AO75807 674 aaPredicted RBP15.28■□□□□ 0.04
SOX6-213ENST00000530378 NBPF8Q3BBV2 869 aa15.27■□□□□ 0.03
SOX6-213ENST00000530378 TIMELESSQ9UNS1 1208 aa15.27■□□□□ 0.03
SOX6-213ENST00000530378 KDM5AP29375 1690 aaKnown RBP15.26■□□□□ 0.03
SOX6-213ENST00000530378 ADGRF5Q8IZF2 1346 aa15.25■□□□□ 0.03
SOX6-213ENST00000530378 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
SOX6-213ENST00000530378 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
SOX6-213ENST00000530378 PRAG1Q86YV5 1406 aa15.24■□□□□ 0.03
SOX6-213ENST00000530378 MYOM2P54296 1465 aa15.23■□□□□ 0.03
SOX6-213ENST00000530378 TRPM1Q7Z4N2 1603 aa15.23■□□□□ 0.03
SOX6-213ENST00000530378 TMEM2Q9UHN6 1383 aa15.21■□□□□ 0.03
SOX6-213ENST00000530378 SOCS7O14512 581 aa15.21■□□□□ 0.03
SOX6-213ENST00000530378 ZFYVE9O95405 1425 aa15.21■□□□□ 0.03
SOX6-213ENST00000530378 IQGAP1P46940 1657 aa15.2■□□□□ 0.02
SOX6-213ENST00000530378 RPGRIP1LQ68CZ1 1315 aa15.19■□□□□ 0.02
SOX6-213ENST00000530378 NRXN1Q9ULB1 1477 aa15.18■□□□□ 0.02
SOX6-213ENST00000530378 PIK3C2GO75747 1445 aa15.18■□□□□ 0.02
SOX6-213ENST00000530378 RALGAPBQ86X10 1494 aa15.18■□□□□ 0.02
SOX6-213ENST00000530378 SLIT1O75093 1534 aa15.17■□□□□ 0.02
SOX6-213ENST00000530378 THEMISQ8N1K5 641 aaPredicted RBP15.17■□□□□ 0.02
SOX6-213ENST00000530378 LTKP29376 864 aa15.17■□□□□ 0.02
SOX6-213ENST00000530378 NBPF1Q3BBV0 1214 aa15.17■□□□□ 0.02
SOX6-213ENST00000530378 ARHGAP23Q9P227 1491 aa15.16■□□□□ 0.02
SOX6-213ENST00000530378 NRXN3Q9Y4C0 1643 aa15.16■□□□□ 0.02
SOX6-213ENST00000530378 VGFO15240 615 aaPredicted RBP15.16■□□□□ 0.02
SOX6-213ENST00000530378 HSPA2P54652 639 aa15.16■□□□□ 0.02
SOX6-213ENST00000530378 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
SOX6-213ENST00000530378 BCANQ96GW7 911 aa15.16■□□□□ 0.02
SOX6-213ENST00000530378 ROCK2O75116 1388 aaKnown RBP15.16■□□□□ 0.02
SOX6-213ENST00000530378 POLR1AO95602 1720 aaPredicted RBP15.16■□□□□ 0.02
SOX6-213ENST00000530378 TXNDC2Q86VQ3 553 aa15.15■□□□□ 0.02
SOX6-213ENST00000530378 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
SOX6-213ENST00000530378 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
SOX6-213ENST00000530378 HIRIP3Q9BW71 556 aaPredicted RBP15.14■□□□□ 0.01
SOX6-213ENST00000530378 ILDR2Q71H61 639 aa15.13■□□□□ 0.01
SOX6-213ENST00000530378 EID1Q9Y6B2 187 aa15.13■□□□□ 0.01
SOX6-213ENST00000530378 SETD1AO15047 1707 aaKnown RBP15.13■□□□□ 0.01
SOX6-213ENST00000530378 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.13■□□□□ 0.01
SOX6-213ENST00000530378 LAMC1P11047 1609 aa15.12■□□□□ 0.01
SOX6-213ENST00000530378 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
SOX6-213ENST00000530378 TMEM132EQ6IEE7 984 aa15.12■□□□□ 0.01
SOX6-213ENST00000530378 CARD11Q9BXL7 1154 aa15.12■□□□□ 0.01
SOX6-213ENST00000530378 ALKQ9UM73 1620 aa15.12■□□□□ 0.01
SOX6-213ENST00000530378 SETBP1Q9Y6X0 1596 aa15.11■□□□□ 0.01
SOX6-213ENST00000530378 NCKAP5LQ9HCH0 1330 aa15.11■□□□□ 0.01
SOX6-213ENST00000530378 HDGFP51858 240 aaKnown RBP15.1■□□□□ 0.01
SOX6-213ENST00000530378 STAC3Q96MF2 364 aa15.1■□□□□ 0.01
SOX6-213ENST00000530378 PLEKHG1Q9ULL1 1385 aa15.09■□□□□ 0.01
SOX6-213ENST00000530378 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
SOX6-213ENST00000530378 ADGRB1O14514 1584 aa15.09■□□□□ 0.01
SOX6-213ENST00000530378 DISP3Q9P2K9 1392 aa15.09■□□□□ 0.01
SOX6-213ENST00000530378 ANKLE2Q86XL3 938 aa15.08■□□□□ 0.01
SOX6-213ENST00000530378 C14orf93Q9H972 538 aaKnown RBP15.08■□□□□ 0.01
SOX6-213ENST00000530378 USP47Q96K76 1375 aa15.08■□□□□ 0
SOX6-213ENST00000530378 ADAMTS13Q76LX8 1427 aa15.07■□□□□ 0
SOX6-213ENST00000530378 STK26Q9P289 416 aa15.07■□□□□ 0
SOX6-213ENST00000530378 HSPA5P11021 654 aaKnown RBP15.06■□□□□ 0
SOX6-213ENST00000530378 GPRASP1Q5JY77 1395 aa15.06■□□□□ 0
SOX6-213ENST00000530378 STRCQ7RTU9 1775 aa15.05■□□□□ -0
SOX6-213ENST00000530378 METP08581 1390 aa15.05■□□□□ -0
SOX6-213ENST00000530378 NPHP4O75161 1426 aaPredicted RBP15.05■□□□□ -0
SOX6-213ENST00000530378 ARHGEF28Q8N1W1 1705 aaKnown RBP15.04■□□□□ -0
SOX6-213ENST00000530378 EIF4G2P78344 907 aaKnown RBP eCLIP15.03■□□□□ -0
SOX6-213ENST00000530378 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
SOX6-213ENST00000530378 YTHDC2Q9H6S0 1430 aaKnown RBP15.02■□□□□ -0
SOX6-213ENST00000530378 DIP2AQ14689 1571 aa15.02□□□□□ -0.01
SOX6-213ENST00000530378 MED14O60244 1454 aa15.01□□□□□ -0.01
SOX6-213ENST00000530378 CERKQ8TCT0 537 aa15.01□□□□□ -0.01
SOX6-213ENST00000530378 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
SOX6-213ENST00000530378 ST20-MTHFSA0A0A6YYL1 179 aa15□□□□□ -0.01
SOX6-213ENST00000530378 SAFB2Q14151 953 aaKnown RBP eCLIP15□□□□□ -0.01
SOX6-213ENST00000530378 PTPRUQ92729 1446 aa14.99□□□□□ -0.01
SOX6-213ENST00000530378 KNDC1Q76NI1 1749 aa14.99□□□□□ -0.01
SOX6-213ENST00000530378 ZNF316A6NFI3 1004 aaPredicted RBP14.97□□□□□ -0.01
SOX6-213ENST00000530378 LRPPRCP42704 1394 aaKnown RBP14.97□□□□□ -0.01
SOX6-213ENST00000530378 EIF3AQ14152 1382 aaKnown RBP14.97□□□□□ -0.01
SOX6-213ENST00000530378 CHD2O14647 1828 aaKnown RBP14.97□□□□□ -0.01
SOX6-213ENST00000530378 XRN1Q8IZH2 1706 aaKnown RBP14.96□□□□□ -0.01
SOX6-213ENST00000530378 PLEKHH1Q9ULM0 1364 aa14.96□□□□□ -0.01
SOX6-213ENST00000530378 TBX22Q9Y458 520 aa14.96□□□□□ -0.01
SOX6-213ENST00000530378 PRAM1Q96QH2 718 aa14.95□□□□□ -0.02
SOX6-213ENST00000530378 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
SOX6-213ENST00000530378 CPS1P31327 1500 aa14.95□□□□□ -0.02
SOX6-213ENST00000530378 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
SOX6-213ENST00000530378 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
SOX6-213ENST00000530378 STRCP1A6NGW2 1772 aa14.94□□□□□ -0.02
SOX6-213ENST00000530378 ROBO2Q9HCK4 1378 aa14.94□□□□□ -0.02
SOX6-213ENST00000530378 AMOTL2Q9Y2J4 779 aa14.94□□□□□ -0.02
SOX6-213ENST00000530378 POGKQ9P215 609 aa14.93□□□□□ -0.02
SOX6-213ENST00000530378 C11orf95C9JLR9 678 aaPredicted RBP14.92□□□□□ -0.02
SOX6-213ENST00000530378 KCNA6P17658 529 aa14.92□□□□□ -0.02
SOX6-213ENST00000530378 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
SOX6-213ENST00000530378 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms