RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 RPGRIP1LQ68CZ1 1315 aa21.49■■□□□ 1.03
RDX-209ENST00000530131 CHGAP10645 457 aaKnown RBP21.49■■□□□ 1.03
RDX-209ENST00000530131 ADGRF5Q8IZF2 1346 aa21.48■■□□□ 1.03
RDX-209ENST00000530131 IQGAP1P46940 1657 aa21.47■■□□□ 1.03
RDX-209ENST00000530131 WASHC2AQ641Q2 1341 aa21.47■■□□□ 1.03
RDX-209ENST00000530131 FER1L4A9Z1Z3 1794 aa21.47■■□□□ 1.03
RDX-209ENST00000530131 ESF1Q9H501 851 aaKnown RBP21.47■■□□□ 1.03
RDX-209ENST00000530131 C11orf95C9JLR9 678 aaPredicted RBP21.45■■□□□ 1.02
RDX-209ENST00000530131 PIK3C2GO75747 1445 aa21.45■■□□□ 1.02
RDX-209ENST00000530131 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
RDX-209ENST00000530131 CCDC7Q96M83 1385 aa21.44■■□□□ 1.02
RDX-209ENST00000530131 C3P01024 1663 aa21.42■■□□□ 1.02
RDX-209ENST00000530131 ZFYVE9O95405 1425 aa21.42■■□□□ 1.02
RDX-209ENST00000530131 MIER1Q8N108 512 aa21.41■■□□□ 1.02
RDX-209ENST00000530131 A2ML1A8K2U0 1454 aa21.4■■□□□ 1.02
RDX-209ENST00000530131 ST20-MTHFSA0A0A6YYL1 179 aa21.4■■□□□ 1.02
RDX-209ENST00000530131 SETBP1Q9Y6X0 1596 aa21.4■■□□□ 1.02
RDX-209ENST00000530131 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
RDX-209ENST00000530131 KDM5AP29375 1690 aaKnown RBP21.39■■□□□ 1.01
RDX-209ENST00000530131 TNRQ92752 1358 aa21.39■■□□□ 1.01
RDX-209ENST00000530131 SCAF11Q99590 1463 aaKnown RBP21.38■■□□□ 1.01
RDX-209ENST00000530131 CFAP70Q5T0N1 1121 aa21.37■■□□□ 1.01
RDX-209ENST00000530131 ADGRB1O14514 1584 aa21.36■■□□□ 1.01
RDX-209ENST00000530131 VGFO15240 615 aaPredicted RBP21.35■■□□□ 1.01
RDX-209ENST00000530131 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
RDX-209ENST00000530131 UBR1Q8IWV7 1749 aa21.33■■□□□ 1.01
RDX-209ENST00000530131 ADAMTSL3P82987 1691 aa21.33■■□□□ 1.01
RDX-209ENST00000530131 TESK2Q96S53 571 aa21.33■■□□□ 1
RDX-209ENST00000530131 NLRP1Q9C000 1473 aa21.31■■□□□ 1
RDX-209ENST00000530131 NUTM2DQ5VT03 806 aaPredicted RBP21.31■■□□□ 1
RDX-209ENST00000530131 RIMS1Q86UR5 1692 aaKnown RBP21.31■■□□□ 1
RDX-209ENST00000530131 MYO3AQ8NEV4 1616 aa21.3■■□□□ 1
RDX-209ENST00000530131 CEBPAP49715 358 aaPredicted RBP21.3■■□□□ 1
RDX-209ENST00000530131 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
RDX-209ENST00000530131 RIMS2Q9UQ26 1411 aa21.29■■□□□ 1
RDX-209ENST00000530131 ASXL1Q8IXJ9 1541 aa21.28■■□□□ 1
RDX-209ENST00000530131 EIF3AQ14152 1382 aaKnown RBP21.27■■□□□ 1
RDX-209ENST00000530131 DISP3Q9P2K9 1392 aa21.26■□□□□ 0.99
RDX-209ENST00000530131 SETD1AO15047 1707 aaKnown RBP21.24■□□□□ 0.99
RDX-209ENST00000530131 ALKQ9UM73 1620 aa21.24■□□□□ 0.99
RDX-209ENST00000530131 NRXN3Q9Y4C0 1643 aa21.23■□□□□ 0.99
RDX-209ENST00000530131 ARHGEF28Q8N1W1 1705 aaKnown RBP21.22■□□□□ 0.99
RDX-209ENST00000530131 TMEM2Q9UHN6 1383 aa21.21■□□□□ 0.99
RDX-209ENST00000530131 TMEM132EQ6IEE7 984 aa21.2■□□□□ 0.98
RDX-209ENST00000530131 PTPRMP28827 1452 aa21.2■□□□□ 0.98
RDX-209ENST00000530131 SBNO2Q9Y2G9 1366 aa21.19■□□□□ 0.98
RDX-209ENST00000530131 TMF1P82094 1093 aa21.19■□□□□ 0.98
RDX-209ENST00000530131 QRICH2Q9H0J4 1663 aa21.19■□□□□ 0.98
RDX-209ENST00000530131 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.18■□□□□ 0.98
RDX-209ENST00000530131 SLIT1O75093 1534 aa21.17■□□□□ 0.98
RDX-209ENST00000530131 POLR3GLQ9BT43 218 aa21.17■□□□□ 0.98
RDX-209ENST00000530131 ARHGAP23Q9P227 1491 aa21.17■□□□□ 0.98
RDX-209ENST00000530131 ANP32CO43423 234 aa21.16■□□□□ 0.98
RDX-209ENST00000530131 TRAK1Q9UPV9 953 aa21.15■□□□□ 0.98
RDX-209ENST00000530131 CENPJQ9HC77 1338 aaPredicted RBP21.15■□□□□ 0.98
RDX-209ENST00000530131 CEP170BQ9Y4F5 1589 aaPredicted RBP21.14■□□□□ 0.97
RDX-209ENST00000530131 ZNF142P52746 1687 aaPredicted RBP21.14■□□□□ 0.97
RDX-209ENST00000530131 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
RDX-209ENST00000530131 YTHDC2Q9H6S0 1430 aaKnown RBP21.13■□□□□ 0.97
RDX-209ENST00000530131 MYOM1P52179 1685 aa21.12■□□□□ 0.97
RDX-209ENST00000530131 HDGFP51858 240 aaKnown RBP21.12■□□□□ 0.97
RDX-209ENST00000530131 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
RDX-209ENST00000530131 SLC24A1O60721 1099 aa21.1■□□□□ 0.97
RDX-209ENST00000530131 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
RDX-209ENST00000530131 PLEKHG1Q9ULL1 1385 aa21.09■□□□□ 0.97
RDX-209ENST00000530131 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
RDX-209ENST00000530131 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
RDX-209ENST00000530131 LTKP29376 864 aa21.08■□□□□ 0.97
RDX-209ENST00000530131 CDCA8Q53HL2 280 aa21.08■□□□□ 0.97
RDX-209ENST00000530131 ADAMTS13Q76LX8 1427 aa21.07■□□□□ 0.96
RDX-209ENST00000530131 LRPPRCP42704 1394 aaKnown RBP21.07■□□□□ 0.96
RDX-209ENST00000530131 KNDC1Q76NI1 1749 aa21.07■□□□□ 0.96
RDX-209ENST00000530131 MED14O60244 1454 aa21.06■□□□□ 0.96
RDX-209ENST00000530131 THEMISQ8N1K5 641 aaPredicted RBP21.06■□□□□ 0.96
RDX-209ENST00000530131 PRKRIP1Q9H875 184 aaPredicted RBP21.06■□□□□ 0.96
RDX-209ENST00000530131 TULP4Q9NRJ4 1543 aa21.05■□□□□ 0.96
RDX-209ENST00000530131 METP08581 1390 aa21.05■□□□□ 0.96
RDX-209ENST00000530131 STK26Q9P289 416 aa21.04■□□□□ 0.96
RDX-209ENST00000530131 TXNDC2Q86VQ3 553 aa21.03■□□□□ 0.96
RDX-209ENST00000530131 ABCC11Q96J66 1382 aa21.03■□□□□ 0.96
RDX-209ENST00000530131 TECPR2O15040 1411 aa21.02■□□□□ 0.96
RDX-209ENST00000530131 PER1O15534 1290 aaPredicted RBP21.02■□□□□ 0.95
RDX-209ENST00000530131 EID1Q9Y6B2 187 aa21.02■□□□□ 0.95
RDX-209ENST00000530131 CPS1P31327 1500 aa21■□□□□ 0.95
RDX-209ENST00000530131 DIP2AQ14689 1571 aa20.99■□□□□ 0.95
RDX-209ENST00000530131 PRAM1Q96QH2 718 aa20.99■□□□□ 0.95
RDX-209ENST00000530131 PANK3Q9H999 370 aa20.99■□□□□ 0.95
RDX-209ENST00000530131 PUS7Q96PZ0 661 aaKnown RBP20.97■□□□□ 0.95
RDX-209ENST00000530131 EVC2Q86UK5 1308 aa20.96■□□□□ 0.95
RDX-209ENST00000530131 FAM135BQ49AJ0 1406 aa20.96■□□□□ 0.95
RDX-209ENST00000530131 SAFB2Q14151 953 aaKnown RBP eCLIP20.95■□□□□ 0.94
RDX-209ENST00000530131 BCANQ96GW7 911 aa20.94■□□□□ 0.94
RDX-209ENST00000530131 PLEKHH1Q9ULM0 1364 aa20.94■□□□□ 0.94
RDX-209ENST00000530131 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
RDX-209ENST00000530131 SIRT1Q96EB6 747 aa20.94■□□□□ 0.94
RDX-209ENST00000530131 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
RDX-209ENST00000530131 POGKQ9P215 609 aa20.94■□□□□ 0.94
RDX-209ENST00000530131 PTPRUQ92729 1446 aa20.93■□□□□ 0.94
RDX-209ENST00000530131 TBX22Q9Y458 520 aa20.92■□□□□ 0.94
RDX-209ENST00000530131 PARD3Q8TEW0 1356 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms