RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
USP35-202ENST00000528910 SLC4A1APQ9BWU0 796 aaKnown RBP25.96■■□□□ 1.75
USP35-202ENST00000528910 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
USP35-202ENST00000528910 PLEKHG1Q9ULL1 1385 aa25.94■■□□□ 1.74
USP35-202ENST00000528910 NWD1Q149M9 1564 aa25.93■■□□□ 1.74
USP35-202ENST00000528910 DIP2AQ14689 1571 aa25.91■■□□□ 1.74
USP35-202ENST00000528910 NEXMIFQ5QGS0 1516 aa25.91■■□□□ 1.74
USP35-202ENST00000528910 CHGAP10645 457 aaKnown RBP25.89■■□□□ 1.74
USP35-202ENST00000528910 XIRP1Q702N8 1843 aaKnown RBP25.88■■□□□ 1.73
USP35-202ENST00000528910 NRXN3Q9Y4C0 1643 aa25.88■■□□□ 1.73
USP35-202ENST00000528910 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.87■■□□□ 1.73
USP35-202ENST00000528910 LRRC7Q96NW7 1537 aa25.87■■□□□ 1.73
USP35-202ENST00000528910 SETBP1Q9Y6X0 1596 aa25.86■■□□□ 1.73
USP35-202ENST00000528910 CHD2O14647 1828 aaKnown RBP25.86■■□□□ 1.73
USP35-202ENST00000528910 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
USP35-202ENST00000528910 MPHOSPH9Q99550 1183 aa25.86■■□□□ 1.73
USP35-202ENST00000528910 PPLO60437 1756 aa25.85■■□□□ 1.73
USP35-202ENST00000528910 ADAMTS13Q76LX8 1427 aa25.84■■□□□ 1.73
USP35-202ENST00000528910 NKTRP30414 1462 aaKnown RBP25.83■■□□□ 1.73
USP35-202ENST00000528910 PPP1R15AO75807 674 aaPredicted RBP25.82■■□□□ 1.72
USP35-202ENST00000528910 IFT172Q9UG01 1749 aa25.81■■□□□ 1.72
USP35-202ENST00000528910 CCDC144AA2RUR9 1427 aa25.8■■□□□ 1.72
USP35-202ENST00000528910 FOXD1Q16676 465 aa25.8■■□□□ 1.72
USP35-202ENST00000528910 HRCP23327 699 aa25.79■■□□□ 1.72
USP35-202ENST00000528910 SLC26A8Q96RN1 970 aa25.78■■□□□ 1.72
USP35-202ENST00000528910 ALKQ9UM73 1620 aa25.77■■□□□ 1.72
USP35-202ENST00000528910 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
USP35-202ENST00000528910 SPATA31E1Q6ZUB1 1445 aa25.76■■□□□ 1.71
USP35-202ENST00000528910 PIK3R4Q99570 1358 aa25.75■■□□□ 1.71
USP35-202ENST00000528910 XRN1Q8IZH2 1706 aaKnown RBP25.74■■□□□ 1.71
USP35-202ENST00000528910 KCNA6P17658 529 aa25.74■■□□□ 1.71
USP35-202ENST00000528910 ZNF326Q5BKZ1 582 aaKnown RBP25.74■■□□□ 1.71
USP35-202ENST00000528910 NUTM2DQ5VT03 806 aaPredicted RBP25.74■■□□□ 1.71
USP35-202ENST00000528910 TBX22Q9Y458 520 aa25.74■■□□□ 1.71
USP35-202ENST00000528910 BCANQ96GW7 911 aa25.71■■□□□ 1.71
USP35-202ENST00000528910 RPGRIP1LQ68CZ1 1315 aa25.69■■□□□ 1.7
USP35-202ENST00000528910 UBAP1LF5GYI3 381 aa25.67■■□□□ 1.7
USP35-202ENST00000528910 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
USP35-202ENST00000528910 TMEM94Q12767 1356 aa25.66■■□□□ 1.7
USP35-202ENST00000528910 ANKRD30BQ9BXX2 1392 aa25.65■■□□□ 1.7
USP35-202ENST00000528910 PTPRUQ92729 1446 aa25.64■■□□□ 1.7
USP35-202ENST00000528910 VGFO15240 615 aaPredicted RBP25.61■■□□□ 1.69
USP35-202ENST00000528910 TOM1O60784 492 aa25.61■■□□□ 1.69
USP35-202ENST00000528910 NCOA3Q9Y6Q9 1424 aa25.6■■□□□ 1.69
USP35-202ENST00000528910 METP08581 1390 aa25.59■■□□□ 1.69
USP35-202ENST00000528910 PRAG1Q86YV5 1406 aa25.59■■□□□ 1.69
USP35-202ENST00000528910 MYOM2P54296 1465 aa25.59■■□□□ 1.69
USP35-202ENST00000528910 PROSER2Q86WR7 435 aaPredicted RBP25.57■■□□□ 1.68
USP35-202ENST00000528910 PIK3C2GO75747 1445 aa25.56■■□□□ 1.68
USP35-202ENST00000528910 NRXN1Q9ULB1 1477 aa25.56■■□□□ 1.68
USP35-202ENST00000528910 LAMC1P11047 1609 aa25.55■■□□□ 1.68
USP35-202ENST00000528910 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.54■■□□□ 1.68
USP35-202ENST00000528910 PTCH1Q13635 1447 aa25.53■■□□□ 1.68
USP35-202ENST00000528910 ASXL1Q8IXJ9 1541 aa25.53■■□□□ 1.68
USP35-202ENST00000528910 KNDC1Q76NI1 1749 aa25.52■■□□□ 1.68
USP35-202ENST00000528910 RGL3Q3MIN7 710 aa25.52■■□□□ 1.68
USP35-202ENST00000528910 AMOTL2Q9Y2J4 779 aa25.52■■□□□ 1.68
USP35-202ENST00000528910 MSH6P52701 1360 aa25.52■■□□□ 1.68
USP35-202ENST00000528910 NALCNQ8IZF0 1738 aa25.51■■□□□ 1.68
USP35-202ENST00000528910 ADGRF5Q8IZF2 1346 aa25.51■■□□□ 1.67
USP35-202ENST00000528910 RBM33Q96EV2 1170 aaKnown RBP25.49■■□□□ 1.67
USP35-202ENST00000528910 ROBO1Q9Y6N7 1651 aa25.48■■□□□ 1.67
USP35-202ENST00000528910 PIP4K2BP78356 416 aa25.48■■□□□ 1.67
USP35-202ENST00000528910 DCCP43146 1447 aa25.46■■□□□ 1.67
USP35-202ENST00000528910 SCAF1Q9H7N4 1312 aaKnown RBP25.45■■□□□ 1.66
USP35-202ENST00000528910 FAM135BQ49AJ0 1406 aa25.45■■□□□ 1.66
USP35-202ENST00000528910 TECPR2O15040 1411 aa25.44■■□□□ 1.66
USP35-202ENST00000528910 ADGRL3Q9HAR2 1447 aa25.44■■□□□ 1.66
USP35-202ENST00000528910 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
USP35-202ENST00000528910 ROBO2Q9HCK4 1378 aa25.41■■□□□ 1.66
USP35-202ENST00000528910 HSPA1LP34931 641 aa25.39■■□□□ 1.66
USP35-202ENST00000528910 C19orf44Q9H6X5 657 aa25.38■■□□□ 1.65
USP35-202ENST00000528910 LRPPRCP42704 1394 aaKnown RBP25.38■■□□□ 1.65
USP35-202ENST00000528910 DHX57Q6P158 1386 aaKnown RBP25.38■■□□□ 1.65
USP35-202ENST00000528910 ADGRB1O14514 1584 aa25.36■■□□□ 1.65
USP35-202ENST00000528910 C14orf37Q86TY3 774 aa25.36■■□□□ 1.65
USP35-202ENST00000528910 YTHDC2Q9H6S0 1430 aaKnown RBP25.35■■□□□ 1.65
USP35-202ENST00000528910 CDC42BPGQ6DT37 1551 aa25.35■■□□□ 1.65
USP35-202ENST00000528910 CADPS2Q86UW7 1296 aa25.34■■□□□ 1.65
USP35-202ENST00000528910 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
USP35-202ENST00000528910 C14orf93Q9H972 538 aaKnown RBP25.34■■□□□ 1.65
USP35-202ENST00000528910 ABCC11Q96J66 1382 aa25.33■■□□□ 1.65
USP35-202ENST00000528910 MST1RQ04912 1400 aa25.33■■□□□ 1.65
USP35-202ENST00000528910 KIAA1210Q9ULL0 1709 aa25.33■■□□□ 1.65
USP35-202ENST00000528910 PHLPP1O60346 1717 aa25.32■■□□□ 1.64
USP35-202ENST00000528910 SLAIN2Q9P270 581 aa25.32■■□□□ 1.64
USP35-202ENST00000528910 AHDC1Q5TGY3 1603 aaPredicted RBP25.32■■□□□ 1.64
USP35-202ENST00000528910 DLC1Q96QB1 1528 aa25.31■■□□□ 1.64
USP35-202ENST00000528910 ATF3P18847 181 aa25.3■■□□□ 1.64
USP35-202ENST00000528910 COL16A1Q07092 1604 aaPredicted RBP25.3■■□□□ 1.64
USP35-202ENST00000528910 NHSL1Q5SYE7 1610 aa25.29■■□□□ 1.64
USP35-202ENST00000528910 CFAP70Q5T0N1 1121 aa25.28■■□□□ 1.64
USP35-202ENST00000528910 DCAF11Q8TEB1 546 aa25.28■■□□□ 1.64
USP35-202ENST00000528910 DISP3Q9P2K9 1392 aa25.27■■□□□ 1.64
USP35-202ENST00000528910 TMEM132EQ6IEE7 984 aa25.26■■□□□ 1.63
USP35-202ENST00000528910 MED1Q15648 1581 aaPredicted RBP25.26■■□□□ 1.63
USP35-202ENST00000528910 FMN2Q9NZ56 1722 aa25.24■■□□□ 1.63
USP35-202ENST00000528910 ARHGEF28Q8N1W1 1705 aaKnown RBP25.23■■□□□ 1.63
USP35-202ENST00000528910 PLEKHH1Q9ULM0 1364 aa25.22■■□□□ 1.63
USP35-202ENST00000528910 SIRT1Q96EB6 747 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms