RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
ITGB1-218ENST00000528877 AFAP1Q8N556 730 aa11.28□□□□□ -0.6
ITGB1-218ENST00000528877 ARID4BQ4LE39 1312 aaPredicted RBP11.28□□□□□ -0.6
ITGB1-218ENST00000528877 LMTK3Q96Q04 1460 aa11.27□□□□□ -0.6
ITGB1-218ENST00000528877 MBD5Q9P267 1494 aa11.27□□□□□ -0.6
ITGB1-218ENST00000528877 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
ITGB1-218ENST00000528877 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
ITGB1-218ENST00000528877 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
ITGB1-218ENST00000528877 LOC105371045A0A1W2PR82 267 aa11.24□□□□□ -0.61
ITGB1-218ENST00000528877 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
ITGB1-218ENST00000528877 RTEL1-TNFRSF6BF6WH68 1400 aa11.24□□□□□ -0.61
ITGB1-218ENST00000528877 CAMSAP2Q08AD1 1489 aa11.24□□□□□ -0.61
ITGB1-218ENST00000528877 CCDC141Q6ZP82 1450 aa11.24□□□□□ -0.61
ITGB1-218ENST00000528877 ARHGEF5Q12774 1597 aa11.24□□□□□ -0.61
ITGB1-218ENST00000528877 ADGBQ8N7X0 1667 aa11.24□□□□□ -0.61
ITGB1-218ENST00000528877 POTEFA5A3E0 1075 aa11.23□□□□□ -0.61
ITGB1-218ENST00000528877 STK25O00506 426 aa11.23□□□□□ -0.61
ITGB1-218ENST00000528877 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
ITGB1-218ENST00000528877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.611e-13■■□□□ 13.2
ITGB1-218ENST00000528877 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
ITGB1-218ENST00000528877 PREX1Q8TCU6 1659 aa11.21□□□□□ -0.61
ITGB1-218ENST00000528877 FAM135AQ9P2D6 1515 aa11.21□□□□□ -0.61
ITGB1-218ENST00000528877 A2MP01023 1474 aa11.21□□□□□ -0.61
ITGB1-218ENST00000528877 CNTLNQ9NXG0 1405 aa11.21□□□□□ -0.61
ITGB1-218ENST00000528877 SPAG9O60271 1321 aaKnown RBP11.21□□□□□ -0.61
ITGB1-218ENST00000528877 SOX12O15370 315 aa11.21□□□□□ -0.61
ITGB1-218ENST00000528877 STK24Q9Y6E0 443 aa11.21□□□□□ -0.61
ITGB1-218ENST00000528877 MIA2Q96PC5 1412 aa11.2□□□□□ -0.62
ITGB1-218ENST00000528877 MAST1Q9Y2H9 1570 aa11.2□□□□□ -0.62
ITGB1-218ENST00000528877 MYOM3Q5VTT5 1437 aa11.19□□□□□ -0.62
ITGB1-218ENST00000528877 HNRNPMP52272 730 aaKnown RBP eCLIP11.19□□□□□ -0.622e-7■■■□□ 17
ITGB1-218ENST00000528877 EFCAB3Q8N7B9 438 aa11.19□□□□□ -0.62
ITGB1-218ENST00000528877 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
ITGB1-218ENST00000528877 C3P01024 1663 aa11.19□□□□□ -0.62
ITGB1-218ENST00000528877 ZNF644Q9H582 1327 aaPredicted RBP11.18□□□□□ -0.62
ITGB1-218ENST00000528877 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
ITGB1-218ENST00000528877 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
ITGB1-218ENST00000528877 PDCD7Q8N8D1 485 aaKnown RBP11.17□□□□□ -0.62
ITGB1-218ENST00000528877 NPATQ14207 1427 aa11.17□□□□□ -0.62
ITGB1-218ENST00000528877 RSPH4AQ5TD94 716 aa11.16□□□□□ -0.62
ITGB1-218ENST00000528877 SHANK2Q9UPX8 1470 aa11.15□□□□□ -0.62
ITGB1-218ENST00000528877 MLECQ14165 292 aa11.15□□□□□ -0.62
ITGB1-218ENST00000528877 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
ITGB1-218ENST00000528877 DHX29Q7Z478 1369 aaKnown RBP11.15□□□□□ -0.63
ITGB1-218ENST00000528877 CROCC2H7BZ55 1655 aa11.14□□□□□ -0.63
ITGB1-218ENST00000528877 KANK4Q5T7N3 995 aaPredicted RBP11.14□□□□□ -0.63
ITGB1-218ENST00000528877 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
ITGB1-218ENST00000528877 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
ITGB1-218ENST00000528877 EIF2AK4Q9P2K8 1649 aaKnown RBP11.13□□□□□ -0.63
ITGB1-218ENST00000528877 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
ITGB1-218ENST00000528877 UHRF1BP1Q6BDS2 1440 aa11.13□□□□□ -0.63
ITGB1-218ENST00000528877 G3V3G9 751 aa11.13□□□□□ -0.63
ITGB1-218ENST00000528877 ZNF142P52746 1687 aaPredicted RBP11.12□□□□□ -0.63
ITGB1-218ENST00000528877 CLTCQ00610 1675 aaKnown RBP11.12□□□□□ -0.63
ITGB1-218ENST00000528877 NLRP6P59044 892 aa11.12□□□□□ -0.63
ITGB1-218ENST00000528877 KDM5DQ9BY66 1539 aa11.12□□□□□ -0.63
ITGB1-218ENST00000528877 SETD1BQ9UPS6 1966 aaKnown RBP11.11□□□□□ -0.63
ITGB1-218ENST00000528877 PTPN23Q9H3S7 1636 aa11.11□□□□□ -0.63
ITGB1-218ENST00000528877 FGD6Q6ZV73 1430 aa11.1□□□□□ -0.63
ITGB1-218ENST00000528877 DNMT1P26358 1616 aaKnown RBP11.1□□□□□ -0.63
ITGB1-218ENST00000528877 MYO3AQ8NEV4 1616 aa11.1□□□□□ -0.63
ITGB1-218ENST00000528877 ZC3H13Q5T200 1668 aaKnown RBP11.1□□□□□ -0.63
ITGB1-218ENST00000528877 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
ITGB1-218ENST00000528877 PTPRKQ15262 1439 aa11.09□□□□□ -0.63
ITGB1-218ENST00000528877 ZMYM3Q14202 1370 aa11.08□□□□□ -0.64
ITGB1-218ENST00000528877 CEBPAP49715 358 aaPredicted RBP11.08□□□□□ -0.64
ITGB1-218ENST00000528877 MROH1Q8NDA8 1641 aa11.08□□□□□ -0.64
ITGB1-218ENST00000528877 DUOX2Q9NRD8 1548 aa11.08□□□□□ -0.64
ITGB1-218ENST00000528877 PZPP20742 1482 aa11.07□□□□□ -0.64
ITGB1-218ENST00000528877 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
ITGB1-218ENST00000528877 ESF1Q9H501 851 aaKnown RBP11.07□□□□□ -0.64
ITGB1-218ENST00000528877 PRDM15P57071 1507 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-218ENST00000528877 STRCQ7RTU9 1775 aa11.07□□□□□ -0.64
ITGB1-218ENST00000528877 CEP170BQ9Y4F5 1589 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-218ENST00000528877 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
ITGB1-218ENST00000528877 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
ITGB1-218ENST00000528877 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
ITGB1-218ENST00000528877 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
ITGB1-218ENST00000528877 ABCC5O15440 1437 aa11.06□□□□□ -0.64
ITGB1-218ENST00000528877 DAPK1P53355 1430 aa11.06□□□□□ -0.64
ITGB1-218ENST00000528877 ERBINQ96RT1 1412 aa11.06□□□□□ -0.64
ITGB1-218ENST00000528877 DEPDC5O75140 1603 aa11.06□□□□□ -0.64
ITGB1-218ENST00000528877 ST18O60284 1047 aa11.05□□□□□ -0.64
ITGB1-218ENST00000528877 TSPY4P0CV99 314 aa11.05□□□□□ -0.64
ITGB1-218ENST00000528877 TSPY10P0CW01 314 aa11.05□□□□□ -0.64
ITGB1-218ENST00000528877 HSPA2P54652 639 aa11.05□□□□□ -0.64
ITGB1-218ENST00000528877 NCOA1Q15788 1441 aa11.05□□□□□ -0.64
ITGB1-218ENST00000528877 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
ITGB1-218ENST00000528877 ADGRL2O95490 1459 aa11.05□□□□□ -0.64
ITGB1-218ENST00000528877 PLA2R1Q13018 1463 aa11.05□□□□□ -0.64
ITGB1-218ENST00000528877 ABCC3O15438 1527 aa11.04□□□□□ -0.64
ITGB1-218ENST00000528877 PTPRTO14522 1441 aa11.03□□□□□ -0.64
ITGB1-218ENST00000528877 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
ITGB1-218ENST00000528877 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
ITGB1-218ENST00000528877 A2ML1A8K2U0 1454 aa11.02□□□□□ -0.65
ITGB1-218ENST00000528877 GGT6Q6P531 493 aa11.02□□□□□ -0.65
ITGB1-218ENST00000528877 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
ITGB1-218ENST00000528877 SPATA31D1Q6ZQQ2 1576 aa11.02□□□□□ -0.65
ITGB1-218ENST00000528877 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.65
ITGB1-218ENST00000528877 KIF3BO15066 747 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms