RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 WASHC2CQ9Y4E1 1318 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 TCERG1O14776 1098 aaKnown RBP9.8□□□□□ -0.84
C11orf54-207ENST00000528288 TMEM132EQ6IEE7 984 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 TRAK1Q9UPV9 953 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 BLMP54132 1417 aaPredicted RBP9.8□□□□□ -0.84
C11orf54-207ENST00000528288 GGT6Q6P531 493 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 CARD14Q9BXL6 1004 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 RRP7AQ9Y3A4 280 aaKnown RBP9.8□□□□□ -0.84
C11orf54-207ENST00000528288 PLXNC1O60486 1568 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 BCAR3O75815 825 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 RGS3P49796 1198 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 GOLGA2Q08379 1002 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 BACH2Q9BYV9 841 aa9.8□□□□□ -0.84
C11orf54-207ENST00000528288 ABCC1P33527 1531 aa9.79□□□□□ -0.84
C11orf54-207ENST00000528288 SAFB2Q14151 953 aaKnown RBP eCLIP9.78□□□□□ -0.84
C11orf54-207ENST00000528288 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
C11orf54-207ENST00000528288 SCAF11Q99590 1463 aaKnown RBP9.77□□□□□ -0.85
C11orf54-207ENST00000528288 KANK1Q14678 1352 aa9.77□□□□□ -0.85
C11orf54-207ENST00000528288 CDCA8Q53HL2 280 aa9.77□□□□□ -0.85
C11orf54-207ENST00000528288 SLC12A5Q9H2X9 1139 aa9.77□□□□□ -0.85
C11orf54-207ENST00000528288 CLTCL1P53675 1640 aa9.77□□□□□ -0.85
C11orf54-207ENST00000528288 EIF2AK4Q9P2K8 1649 aaKnown RBP9.77□□□□□ -0.85
C11orf54-207ENST00000528288 CFAP65Q6ZU64 1925 aaKnown RBP9.77□□□□□ -0.85
C11orf54-207ENST00000528288 MADDQ8WXG6 1647 aa9.76□□□□□ -0.85
C11orf54-207ENST00000528288 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
C11orf54-207ENST00000528288 FANCAO15360 1455 aa9.76□□□□□ -0.85
C11orf54-207ENST00000528288 ZMYM4Q5VZL5 1548 aa9.76□□□□□ -0.85
C11orf54-207ENST00000528288 SLFN5Q08AF3 891 aa9.76□□□□□ -0.85
C11orf54-207ENST00000528288 ZFYVE16Q7Z3T8 1539 aa9.74□□□□□ -0.85
C11orf54-207ENST00000528288 BCL2L13Q9BXK5 485 aa9.74□□□□□ -0.85
C11orf54-207ENST00000528288 FRAT1Q92837 279 aaPredicted RBP9.74□□□□□ -0.85
C11orf54-207ENST00000528288 ADGRL1O94910 1474 aa9.74□□□□□ -0.85
C11orf54-207ENST00000528288 NEFMP07197 916 aa9.73□□□□□ -0.85
C11orf54-207ENST00000528288 ASXL1Q8IXJ9 1541 aa9.73□□□□□ -0.85
C11orf54-207ENST00000528288 ZNF521Q96K83 1311 aa9.73□□□□□ -0.85
C11orf54-207ENST00000528288 PANK1Q8TE04 598 aa9.73□□□□□ -0.85
C11orf54-207ENST00000528288 LAMC1P11047 1609 aa9.73□□□□□ -0.85
C11orf54-207ENST00000528288 RNF17Q9BXT8 1623 aaKnown RBP9.73□□□□□ -0.85
C11orf54-207ENST00000528288 TRPM2O94759 1503 aa9.73□□□□□ -0.85
C11orf54-207ENST00000528288 PTPRTO14522 1441 aa9.73□□□□□ -0.85
C11orf54-207ENST00000528288 MORC1Q86VD1 984 aa9.73□□□□□ -0.85
C11orf54-207ENST00000528288 TNNQ9UQP3 1299 aa9.72□□□□□ -0.85
C11orf54-207ENST00000528288 NOS1P29475 1434 aa9.72□□□□□ -0.85
C11orf54-207ENST00000528288 CANXP27824 592 aaKnown RBP9.72□□□□□ -0.85
C11orf54-207ENST00000528288 EIF3AQ14152 1382 aaKnown RBP9.72□□□□□ -0.85
C11orf54-207ENST00000528288 MS4A1P11836 297 aa9.72□□□□□ -0.85
C11orf54-207ENST00000528288 STK26Q9P289 416 aa9.72□□□□□ -0.85
C11orf54-207ENST00000528288 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
C11orf54-207ENST00000528288 ATP7AQ04656 1500 aa9.72□□□□□ -0.85
C11orf54-207ENST00000528288 SPHKAPQ2M3C7 1700 aa9.71□□□□□ -0.85
C11orf54-207ENST00000528288 KDM2BQ8NHM5 1336 aa9.71□□□□□ -0.85
C11orf54-207ENST00000528288 IQGAP1P46940 1657 aa9.71□□□□□ -0.85
C11orf54-207ENST00000528288 PHF23Q9BUL5 403 aaPredicted RBP9.71□□□□□ -0.85
C11orf54-207ENST00000528288 ERVK-7P63135 1459 aa9.71□□□□□ -0.86
C11orf54-207ENST00000528288 IGHDP01880 384 aa9.71□□□□□ -0.86
C11orf54-207ENST00000528288 CENPJQ9HC77 1338 aaPredicted RBP9.71□□□□□ -0.86
C11orf54-207ENST00000528288 RAPGEF3O95398 923 aa9.71□□□□□ -0.86
C11orf54-207ENST00000528288 RTEL1-TNFRSF6BF6WH68 1400 aa9.7□□□□□ -0.86
C11orf54-207ENST00000528288 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.7□□□□□ -0.86
C11orf54-207ENST00000528288 CLUAP1Q96AJ1 413 aa9.7□□□□□ -0.86
C11orf54-207ENST00000528288 CLASP1Q7Z460 1538 aa9.7□□□□□ -0.86
C11orf54-207ENST00000528288 ASXL2Q76L83 1435 aa9.69□□□□□ -0.86
C11orf54-207ENST00000528288 UHRF1BP1LA0JNW5 1464 aa9.69□□□□□ -0.86
C11orf54-207ENST00000528288 CENPQQ7L2Z9 268 aaPredicted RBP9.69□□□□□ -0.86
C11orf54-207ENST00000528288 WWC1Q8IX03 1113 aa9.69□□□□□ -0.86
C11orf54-207ENST00000528288 CABP2Q9NPB3 220 aa9.69□□□□□ -0.86
C11orf54-207ENST00000528288 NSD3Q9BZ95 1437 aa9.69□□□□□ -0.86
C11orf54-207ENST00000528288 MTHFSP49914 203 aa9.69□□□□□ -0.86
C11orf54-207ENST00000528288 SYNMO15061 1565 aa9.68□□□□□ -0.86
C11orf54-207ENST00000528288 CEP152O94986 1710 aa9.68□□□□□ -0.86
C11orf54-207ENST00000528288 NPM1P06748 294 aaKnown RBP eCLIP9.68□□□□□ -0.86
C11orf54-207ENST00000528288 MYOM1P52179 1685 aa9.68□□□□□ -0.86
C11orf54-207ENST00000528288 PIK3C2GO75747 1445 aa9.68□□□□□ -0.86
C11orf54-207ENST00000528288 E9PSI1 815 aa9.68□□□□□ -0.86
C11orf54-207ENST00000528288 C8orf34Q49A92 452 aa9.68□□□□□ -0.86
C11orf54-207ENST00000528288 TRMT2AQ8IZ69 625 aaKnown RBP9.67□□□□□ -0.86
C11orf54-207ENST00000528288 TCP11L2Q8N4U5 519 aa9.67□□□□□ -0.86
C11orf54-207ENST00000528288 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
C11orf54-207ENST00000528288 TET3O43151 1660 aa9.67□□□□□ -0.86
C11orf54-207ENST00000528288 RTN4Q9NQC3 1192 aaKnown RBP9.66□□□□□ -0.86
C11orf54-207ENST00000528288 DAXXQ9UER7 740 aaPredicted RBP9.66□□□□□ -0.86
C11orf54-207ENST00000528288 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
C11orf54-207ENST00000528288 NKTRP30414 1462 aaKnown RBP9.66□□□□□ -0.86
C11orf54-207ENST00000528288 U2AF1L5P0DN76 240 aaPredicted RBP9.66□□□□□ -0.86
C11orf54-207ENST00000528288 U2AF1Q01081 240 aaKnown RBP eCLIP9.66□□□□□ -0.86
C11orf54-207ENST00000528288 INSRP06213 1382 aa9.66□□□□□ -0.86
C11orf54-207ENST00000528288 KDM5AP29375 1690 aaKnown RBP9.66□□□□□ -0.86
C11orf54-207ENST00000528288 RLBP1P12271 317 aa9.65□□□□□ -0.86
C11orf54-207ENST00000528288 STAC3Q96MF2 364 aa9.65□□□□□ -0.86
C11orf54-207ENST00000528288 MROH2AA6NES4 1674 aa9.65□□□□□ -0.86
C11orf54-207ENST00000528288 U2SURPO15042 1029 aaKnown RBP9.65□□□□□ -0.87
C11orf54-207ENST00000528288 SEC24BO95487 1268 aa9.65□□□□□ -0.87
C11orf54-207ENST00000528288 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.87
C11orf54-207ENST00000528288 C14orf93Q9H972 538 aaKnown RBP9.65□□□□□ -0.87
C11orf54-207ENST00000528288 MROH1Q8NDA8 1641 aa9.65□□□□□ -0.87
C11orf54-207ENST00000528288 MAP3K4Q9Y6R4 1608 aa9.65□□□□□ -0.87
C11orf54-207ENST00000528288 FBLN1P23142 703 aa9.64□□□□□ -0.87
C11orf54-207ENST00000528288 INO80Q9ULG1 1556 aaPredicted RBP9.64□□□□□ -0.87
C11orf54-207ENST00000528288 NPATQ14207 1427 aa9.64□□□□□ -0.87
C11orf54-207ENST00000528288 TSR2Q969E8 191 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms