RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 HSP90AB2PQ58FF8 381 aa11.46□□□□□ -0.57
CTNND1-213ENST00000526357 APPP05067 770 aa11.46□□□□□ -0.57
CTNND1-213ENST00000526357 NFXL1Q6ZNB6 911 aa11.46□□□□□ -0.57
CTNND1-213ENST00000526357 ERCC4Q92889 916 aaPredicted RBP11.46□□□□□ -0.57
CTNND1-213ENST00000526357 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
CTNND1-213ENST00000526357 ANKRD30AQ9BXX3 1397 aa11.45□□□□□ -0.58
CTNND1-213ENST00000526357 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
CTNND1-213ENST00000526357 MSH5O43196 834 aa11.45□□□□□ -0.58
CTNND1-213ENST00000526357 ZKSCAN2Q63HK3 967 aa11.45□□□□□ -0.58
CTNND1-213ENST00000526357 IFIT2P09913 472 aaKnown RBP11.45□□□□□ -0.58
CTNND1-213ENST00000526357 SAFBQ15424 915 aaKnown RBP eCLIP11.45□□□□□ -0.58
CTNND1-213ENST00000526357 TTC5Q8N0Z6 440 aa11.45□□□□□ -0.58
CTNND1-213ENST00000526357 NUP155O75694 1391 aa11.45□□□□□ -0.58
CTNND1-213ENST00000526357 CWC15Q9P013 229 aaKnown RBP11.45□□□□□ -0.58
CTNND1-213ENST00000526357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.582e-8■□□□□ 11.3
CTNND1-213ENST00000526357 EPS15P42566 896 aa11.44□□□□□ -0.58
CTNND1-213ENST00000526357 EVA1CP58658 441 aa11.44□□□□□ -0.58
CTNND1-213ENST00000526357 MPHOSPH9Q99550 1183 aa11.44□□□□□ -0.58
CTNND1-213ENST00000526357 C9orf78Q9NZ63 289 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-213ENST00000526357 OLFM4Q6UX06 510 aa11.43□□□□□ -0.58
CTNND1-213ENST00000526357 KIF15Q9NS87 1388 aa11.43□□□□□ -0.58
CTNND1-213ENST00000526357 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
CTNND1-213ENST00000526357 CCDC73Q6ZRK6 1079 aa11.43□□□□□ -0.58
CTNND1-213ENST00000526357 FBXW7Q969H0 707 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 NAT10Q9H0A0 1025 aaKnown RBP11.42□□□□□ -0.58
CTNND1-213ENST00000526357 BRMS1Q9HCU9 246 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 EFCAB2Q5VUJ9 269 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 ZRSR2Q15696 482 aaKnown RBP11.42□□□□□ -0.58
CTNND1-213ENST00000526357 FOXD1Q16676 465 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 CAGE1Q8TC20 777 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 FAM13BQ9NYF5 915 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 ROCK1Q13464 1354 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 OFD1O75665 1012 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 ZFYVE27Q5T4F4 411 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 E9PSI1 815 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 TEFQ10587 303 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 IFT57Q9NWB7 429 aa11.42□□□□□ -0.58
CTNND1-213ENST00000526357 DDX58O95786 925 aaKnown RBP11.41□□□□□ -0.58
CTNND1-213ENST00000526357 PDE4AP27815 886 aa11.41□□□□□ -0.58
CTNND1-213ENST00000526357 SMC3Q9UQE7 1217 aa11.41□□□□□ -0.58
CTNND1-213ENST00000526357 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
CTNND1-213ENST00000526357 H0YHG0 523 aa11.41□□□□□ -0.58
CTNND1-213ENST00000526357 COG3Q96JB2 828 aa11.41□□□□□ -0.58
CTNND1-213ENST00000526357 MYBBP1AQ9BQG0 1328 aaKnown RBP11.4□□□□□ -0.58
CTNND1-213ENST00000526357 G3BP1Q13283 466 aaKnown RBP eCLIP11.4□□□□□ -0.588e-9■□□□□ 11.1
CTNND1-213ENST00000526357 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.58
CTNND1-213ENST00000526357 NUCB2P80303 420 aa11.4□□□□□ -0.58
CTNND1-213ENST00000526357 WWC2Q6AWC2 1192 aa11.4□□□□□ -0.58
CTNND1-213ENST00000526357 CHMP5Q9NZZ3 219 aa11.4□□□□□ -0.58
CTNND1-213ENST00000526357 XBP1P17861 261 aa11.39□□□□□ -0.59
CTNND1-213ENST00000526357 DDX19BQ9UMR2 479 aa11.39□□□□□ -0.59
CTNND1-213ENST00000526357 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
CTNND1-213ENST00000526357 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
CTNND1-213ENST00000526357 RRP7AQ9Y3A4 280 aaKnown RBP11.39□□□□□ -0.59
CTNND1-213ENST00000526357 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
CTNND1-213ENST00000526357 CCDC39Q9UFE4 941 aa11.38□□□□□ -0.59
CTNND1-213ENST00000526357 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
CTNND1-213ENST00000526357 CCP110O43303 1012 aa11.38□□□□□ -0.59
CTNND1-213ENST00000526357 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
CTNND1-213ENST00000526357 ERC2O15083 957 aa11.38□□□□□ -0.59
CTNND1-213ENST00000526357 MTERF4Q7Z6M4 381 aaKnown RBP11.38□□□□□ -0.59
CTNND1-213ENST00000526357 NGEFQ8N5V2 710 aa11.38□□□□□ -0.59
CTNND1-213ENST00000526357 PDILTQ8N807 584 aa11.38□□□□□ -0.59
CTNND1-213ENST00000526357 API5Q9BZZ5 524 aaKnown RBP11.38□□□□□ -0.59
CTNND1-213ENST00000526357 KIF3BO15066 747 aa11.37□□□□□ -0.59
CTNND1-213ENST00000526357 EIF2S2P20042 333 aaKnown RBP11.37□□□□□ -0.59
CTNND1-213ENST00000526357 ANKRD18AQ8IVF6 992 aa11.37□□□□□ -0.59
CTNND1-213ENST00000526357 ELL2O00472 640 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-213ENST00000526357 LETM1O95202 739 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-213ENST00000526357 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
CTNND1-213ENST00000526357 WASHC2CQ9Y4E1 1318 aa11.36□□□□□ -0.59
CTNND1-213ENST00000526357 SMARCE1Q969G3 411 aa11.36□□□□□ -0.59
CTNND1-213ENST00000526357 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
CTNND1-213ENST00000526357 RALYLQ86SE5 291 aaKnown RBP11.36□□□□□ -0.59
CTNND1-213ENST00000526357 UACAQ9BZF9 1416 aa11.36□□□□□ -0.59
CTNND1-213ENST00000526357 FMN1Q68DA7 1419 aa11.36□□□□□ -0.59
CTNND1-213ENST00000526357 ERLIN2O94905 339 aa11.35□□□□□ -0.59
CTNND1-213ENST00000526357 CCDC66A2RUB6 948 aa11.35□□□□□ -0.59
CTNND1-213ENST00000526357 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
CTNND1-213ENST00000526357 NUTM2DQ5VT03 806 aaPredicted RBP11.35□□□□□ -0.59
CTNND1-213ENST00000526357 PAF1Q8N7H5 531 aa11.35□□□□□ -0.59
CTNND1-213ENST00000526357 RRP1P56182 461 aaKnown RBP11.35□□□□□ -0.59
CTNND1-213ENST00000526357 SYCP1Q15431 976 aa11.35□□□□□ -0.59
CTNND1-213ENST00000526357 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 MAGEC2Q9UBF1 373 aaPredicted RBP11.34□□□□□ -0.59
CTNND1-213ENST00000526357 CUX2O14529 1486 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 CRBNQ96SW2 442 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 EVC2Q86UK5 1308 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 PSMA5P28066 241 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 FOSBP53539 338 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 BCL2L13Q9BXK5 485 aa11.34□□□□□ -0.59
CTNND1-213ENST00000526357 NUTM2FA1L443 756 aa11.33□□□□□ -0.6
CTNND1-213ENST00000526357 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-213ENST00000526357 LEKR1Q6ZMV7 388 aa11.33□□□□□ -0.6
CTNND1-213ENST00000526357 TRAK1Q9UPV9 953 aa11.33□□□□□ -0.6
CTNND1-213ENST00000526357 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-213ENST00000526357 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms