RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
TSPAN4-213ENST00000524895 MYOM2P54296 1465 aa22.71■■□□□ 1.23
TSPAN4-213ENST00000524895 RIMS2Q9UQ26 1411 aa22.68■■□□□ 1.22
TSPAN4-213ENST00000524895 STAC3Q96MF2 364 aa22.68■■□□□ 1.22
TSPAN4-213ENST00000524895 TMEM2Q9UHN6 1383 aa22.66■■□□□ 1.22
TSPAN4-213ENST00000524895 THEMISQ8N1K5 641 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-213ENST00000524895 PRAG1Q86YV5 1406 aa22.65■■□□□ 1.22
TSPAN4-213ENST00000524895 ZFYVE9O95405 1425 aa22.65■■□□□ 1.22
TSPAN4-213ENST00000524895 SLIT1O75093 1534 aa22.64■■□□□ 1.21
TSPAN4-213ENST00000524895 VGFO15240 615 aaPredicted RBP22.63■■□□□ 1.21
TSPAN4-213ENST00000524895 NUTM2DQ5VT03 806 aaPredicted RBP22.63■■□□□ 1.21
TSPAN4-213ENST00000524895 ARHGAP23Q9P227 1491 aa22.62■■□□□ 1.21
TSPAN4-213ENST00000524895 NRXN1Q9ULB1 1477 aa22.62■■□□□ 1.21
TSPAN4-213ENST00000524895 HDGFP51858 240 aaKnown RBP22.62■■□□□ 1.21
TSPAN4-213ENST00000524895 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.62■■□□□ 1.21
TSPAN4-213ENST00000524895 ADGRF5Q8IZF2 1346 aa22.61■■□□□ 1.21
TSPAN4-213ENST00000524895 NBPF8Q3BBV2 869 aa22.61■■□□□ 1.21
TSPAN4-213ENST00000524895 PIK3C2GO75747 1445 aa22.59■■□□□ 1.21
TSPAN4-213ENST00000524895 TRPM1Q7Z4N2 1603 aa22.58■■□□□ 1.21
TSPAN4-213ENST00000524895 EID1Q9Y6B2 187 aa22.58■■□□□ 1.21
TSPAN4-213ENST00000524895 RALGAPBQ86X10 1494 aa22.58■■□□□ 1.2
TSPAN4-213ENST00000524895 SCAF11Q99590 1463 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-213ENST00000524895 LMTK3Q96Q04 1460 aa22.55■■□□□ 1.2
TSPAN4-213ENST00000524895 KIAA1210Q9ULL0 1709 aa22.55■■□□□ 1.2
TSPAN4-213ENST00000524895 TXNDC2Q86VQ3 553 aa22.55■■□□□ 1.2
TSPAN4-213ENST00000524895 LAMC1P11047 1609 aa22.55■■□□□ 1.2
TSPAN4-213ENST00000524895 LTKP29376 864 aa22.53■■□□□ 1.2
TSPAN4-213ENST00000524895 ROCK2O75116 1388 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-213ENST00000524895 PLEKHG1Q9ULL1 1385 aa22.51■■□□□ 1.19
TSPAN4-213ENST00000524895 POLR1AO95602 1720 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-213ENST00000524895 SETBP1Q9Y6X0 1596 aa22.51■■□□□ 1.19
TSPAN4-213ENST00000524895 ANKLE2Q86XL3 938 aa22.51■■□□□ 1.19
TSPAN4-213ENST00000524895 SENP3Q9H4L4 574 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-213ENST00000524895 IQGAP1P46940 1657 aa22.51■■□□□ 1.19
TSPAN4-213ENST00000524895 BCANQ96GW7 911 aa22.5■■□□□ 1.19
TSPAN4-213ENST00000524895 NRXN3Q9Y4C0 1643 aa22.49■■□□□ 1.19
TSPAN4-213ENST00000524895 CFAP70Q5T0N1 1121 aa22.49■■□□□ 1.19
TSPAN4-213ENST00000524895 ALKQ9UM73 1620 aa22.47■■□□□ 1.19
TSPAN4-213ENST00000524895 C14orf93Q9H972 538 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-213ENST00000524895 HSPA2P54652 639 aa22.46■■□□□ 1.19
TSPAN4-213ENST00000524895 GPRASP1Q5JY77 1395 aa22.46■■□□□ 1.19
TSPAN4-213ENST00000524895 NBPF1Q3BBV0 1214 aa22.45■■□□□ 1.18
TSPAN4-213ENST00000524895 CARD11Q9BXL7 1154 aa22.45■■□□□ 1.18
TSPAN4-213ENST00000524895 SETD1AO15047 1707 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-213ENST00000524895 DIP2AQ14689 1571 aa22.44■■□□□ 1.18
TSPAN4-213ENST00000524895 ADGRB1O14514 1584 aa22.43■■□□□ 1.18
TSPAN4-213ENST00000524895 MED14O60244 1454 aa22.42■■□□□ 1.18
TSPAN4-213ENST00000524895 NPHP4O75161 1426 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-213ENST00000524895 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
TSPAN4-213ENST00000524895 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
TSPAN4-213ENST00000524895 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
TSPAN4-213ENST00000524895 USP47Q96K76 1375 aa22.38■■□□□ 1.17
TSPAN4-213ENST00000524895 TMEM132EQ6IEE7 984 aa22.38■■□□□ 1.17
TSPAN4-213ENST00000524895 SLC26A8Q96RN1 970 aa22.38■■□□□ 1.17
TSPAN4-213ENST00000524895 EIF4G2P78344 907 aaKnown RBP eCLIP22.36■■□□□ 1.17
TSPAN4-213ENST00000524895 METP08581 1390 aa22.36■■□□□ 1.17
TSPAN4-213ENST00000524895 TBX22Q9Y458 520 aa22.35■■□□□ 1.17
TSPAN4-213ENST00000524895 EIF3AQ14152 1382 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-213ENST00000524895 YTHDC2Q9H6S0 1430 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-213ENST00000524895 STRCQ7RTU9 1775 aa22.34■■□□□ 1.17
TSPAN4-213ENST00000524895 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-213ENST00000524895 HSPA5P11021 654 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-213ENST00000524895 LRPPRCP42704 1394 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-213ENST00000524895 STK26Q9P289 416 aa22.31■■□□□ 1.16
TSPAN4-213ENST00000524895 TRAK1Q9UPV9 953 aa22.3■■□□□ 1.16
TSPAN4-213ENST00000524895 KNDC1Q76NI1 1749 aa22.3■■□□□ 1.16
TSPAN4-213ENST00000524895 ARHGEF28Q8N1W1 1705 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-213ENST00000524895 PIK3R4Q99570 1358 aa22.29■■□□□ 1.16
TSPAN4-213ENST00000524895 DLC1Q96QB1 1528 aa22.27■■□□□ 1.16
TSPAN4-213ENST00000524895 CPS1P31327 1500 aa22.26■■□□□ 1.15
TSPAN4-213ENST00000524895 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
TSPAN4-213ENST00000524895 TECPR2O15040 1411 aa22.26■■□□□ 1.15
TSPAN4-213ENST00000524895 PTPRUQ92729 1446 aa22.26■■□□□ 1.15
TSPAN4-213ENST00000524895 HIRIP3Q9BW71 556 aaPredicted RBP22.26■■□□□ 1.15
TSPAN4-213ENST00000524895 XRN1Q8IZH2 1706 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-213ENST00000524895 ST20-MTHFSA0A0A6YYL1 179 aa22.25■■□□□ 1.15
TSPAN4-213ENST00000524895 CHD2O14647 1828 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-213ENST00000524895 CENPJQ9HC77 1338 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-213ENST00000524895 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
TSPAN4-213ENST00000524895 AMOTL2Q9Y2J4 779 aa22.22■■□□□ 1.15
TSPAN4-213ENST00000524895 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
TSPAN4-213ENST00000524895 NWD1Q149M9 1564 aa22.21■■□□□ 1.15
TSPAN4-213ENST00000524895 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
TSPAN4-213ENST00000524895 ZNF316A6NFI3 1004 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-213ENST00000524895 PRAM1Q96QH2 718 aa22.2■■□□□ 1.14
TSPAN4-213ENST00000524895 POGKQ9P215 609 aa22.2■■□□□ 1.14
TSPAN4-213ENST00000524895 FAM135BQ49AJ0 1406 aa22.2■■□□□ 1.14
TSPAN4-213ENST00000524895 ROBO2Q9HCK4 1378 aa22.18■■□□□ 1.14
TSPAN4-213ENST00000524895 KCNA6P17658 529 aa22.17■■□□□ 1.14
TSPAN4-213ENST00000524895 SIRT1Q96EB6 747 aa22.17■■□□□ 1.14
TSPAN4-213ENST00000524895 SBNO2Q9Y2G9 1366 aa22.16■■□□□ 1.14
TSPAN4-213ENST00000524895 SAFB2Q14151 953 aaKnown RBP eCLIP22.16■■□□□ 1.14
TSPAN4-213ENST00000524895 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-213ENST00000524895 PLEKHH1Q9ULM0 1364 aa22.15■■□□□ 1.14
TSPAN4-213ENST00000524895 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
TSPAN4-213ENST00000524895 TESK2Q96S53 571 aa22.15■■□□□ 1.14
TSPAN4-213ENST00000524895 SLC24A1O60721 1099 aa22.13■■□□□ 1.13
TSPAN4-213ENST00000524895 TMF1P82094 1093 aa22.12■■□□□ 1.13
TSPAN4-213ENST00000524895 MINK1Q8N4C8 1332 aaPredicted RBP22.1■■□□□ 1.13
TSPAN4-213ENST00000524895 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms