RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 PTPN23Q9H3S7 1636 aa12.4□□□□□ -0.42
NSMCE2-213ENST00000523824 PPP1R15AO75807 674 aaPredicted RBP12.4□□□□□ -0.42
NSMCE2-213ENST00000523824 LMTK2Q8IWU2 1503 aa12.4□□□□□ -0.42
NSMCE2-213ENST00000523824 JCADQ9P266 1359 aa12.4□□□□□ -0.42
NSMCE2-213ENST00000523824 KDM5AP29375 1690 aaKnown RBP12.39□□□□□ -0.43
NSMCE2-213ENST00000523824 NOS1P29475 1434 aa12.39□□□□□ -0.43
NSMCE2-213ENST00000523824 NKTRP30414 1462 aaKnown RBP12.39□□□□□ -0.43
NSMCE2-213ENST00000523824 CROCC2H7BZ55 1655 aa12.38□□□□□ -0.43
NSMCE2-213ENST00000523824 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
NSMCE2-213ENST00000523824 FGD6Q6ZV73 1430 aa12.37□□□□□ -0.43
NSMCE2-213ENST00000523824 ADGRB3O60242 1522 aa12.37□□□□□ -0.43
NSMCE2-213ENST00000523824 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
NSMCE2-213ENST00000523824 NWD1Q149M9 1564 aa12.35□□□□□ -0.43
NSMCE2-213ENST00000523824 PLEKHG1Q9ULL1 1385 aa12.35□□□□□ -0.43
NSMCE2-213ENST00000523824 CHGAP10645 457 aaKnown RBP12.35□□□□□ -0.43
NSMCE2-213ENST00000523824 TBX22Q9Y458 520 aa12.35□□□□□ -0.43
NSMCE2-213ENST00000523824 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
NSMCE2-213ENST00000523824 ZNF772Q68DY9 489 aaPredicted RBP12.34□□□□□ -0.43
NSMCE2-213ENST00000523824 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.34□□□□□ -0.43
NSMCE2-213ENST00000523824 RIMS2Q9UQ26 1411 aa12.34□□□□□ -0.43
NSMCE2-213ENST00000523824 ATF3P18847 181 aa12.33□□□□□ -0.44
NSMCE2-213ENST00000523824 FAM50AQ14320 339 aaKnown RBP12.33□□□□□ -0.44
NSMCE2-213ENST00000523824 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
NSMCE2-213ENST00000523824 ZFYVE9O95405 1425 aa12.33□□□□□ -0.44
NSMCE2-213ENST00000523824 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
NSMCE2-213ENST00000523824 NCOA3Q9Y6Q9 1424 aa12.32□□□□□ -0.44
NSMCE2-213ENST00000523824 TRIM52Q96A61 297 aa12.32□□□□□ -0.44
NSMCE2-213ENST00000523824 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
NSMCE2-213ENST00000523824 RPRD2Q5VT52 1461 aaKnown RBP12.32□□□□□ -0.44
NSMCE2-213ENST00000523824 ANKRD50Q9ULJ7 1429 aa12.31□□□□□ -0.44
NSMCE2-213ENST00000523824 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
NSMCE2-213ENST00000523824 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
NSMCE2-213ENST00000523824 ADGRL2O95490 1459 aa12.3□□□□□ -0.44
NSMCE2-213ENST00000523824 SETD1AO15047 1707 aaKnown RBP12.3□□□□□ -0.44
NSMCE2-213ENST00000523824 CHD2O14647 1828 aaKnown RBP12.3□□□□□ -0.44
NSMCE2-213ENST00000523824 RXRBP28702 533 aa12.29□□□□□ -0.44
NSMCE2-213ENST00000523824 COL16A1Q07092 1604 aaPredicted RBP12.29□□□□□ -0.44
NSMCE2-213ENST00000523824 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
NSMCE2-213ENST00000523824 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
NSMCE2-213ENST00000523824 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
NSMCE2-213ENST00000523824 AMOTL2Q9Y2J4 779 aa12.28□□□□□ -0.44
NSMCE2-213ENST00000523824 LRP6O75581 1613 aa12.28□□□□□ -0.44
NSMCE2-213ENST00000523824 PIK3R4Q99570 1358 aa12.28□□□□□ -0.44
NSMCE2-213ENST00000523824 TMEM131LA2VDJ0 1609 aa12.26□□□□□ -0.45
NSMCE2-213ENST00000523824 GCC2Q8IWJ2 1684 aa12.26□□□□□ -0.45
NSMCE2-213ENST00000523824 BRINP3Q76B58 766 aa12.26□□□□□ -0.45
NSMCE2-213ENST00000523824 ADAMTS13Q76LX8 1427 aa12.26□□□□□ -0.45
NSMCE2-213ENST00000523824 AHDC1Q5TGY3 1603 aaPredicted RBP12.25□□□□□ -0.45
NSMCE2-213ENST00000523824 MYO5BQ9ULV0 1848 aa12.25□□□□□ -0.45
NSMCE2-213ENST00000523824 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.24□□□□□ -0.45
NSMCE2-213ENST00000523824 DIP2AQ14689 1571 aa12.23□□□□□ -0.45
NSMCE2-213ENST00000523824 AFF2P51816 1311 aa12.22□□□□□ -0.45
NSMCE2-213ENST00000523824 LRRC59Q96AG4 307 aaKnown RBP12.22□□□□□ -0.45
NSMCE2-213ENST00000523824 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
NSMCE2-213ENST00000523824 TRPM2O94759 1503 aa12.21□□□□□ -0.45
NSMCE2-213ENST00000523824 PTPRUQ92729 1446 aa12.21□□□□□ -0.45
NSMCE2-213ENST00000523824 NUP155O75694 1391 aa12.2□□□□□ -0.46
NSMCE2-213ENST00000523824 ZNF326Q5BKZ1 582 aaKnown RBP12.2□□□□□ -0.46
NSMCE2-213ENST00000523824 C8orf37Q96NL8 207 aa12.2□□□□□ -0.46
NSMCE2-213ENST00000523824 QTRT2Q9H974 415 aaKnown RBP12.2□□□□□ -0.46
NSMCE2-213ENST00000523824 DCCP43146 1447 aa12.2□□□□□ -0.46
NSMCE2-213ENST00000523824 UNC13BO14795 1591 aa12.19□□□□□ -0.46
NSMCE2-213ENST00000523824 CDK12Q9NYV4 1490 aaPredicted RBP12.19□□□□□ -0.46
NSMCE2-213ENST00000523824 E9PCH4 1651 aa12.19□□□□□ -0.46
NSMCE2-213ENST00000523824 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
NSMCE2-213ENST00000523824 RBM6P78332 1123 aaKnown RBP12.18□□□□□ -0.46
NSMCE2-213ENST00000523824 DDX17Q92841 729 aaKnown RBP12.18□□□□□ -0.46
NSMCE2-213ENST00000523824 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
NSMCE2-213ENST00000523824 ASXL1Q8IXJ9 1541 aa12.17□□□□□ -0.46
NSMCE2-213ENST00000523824 ITGAEP38570 1179 aa12.17□□□□□ -0.46
NSMCE2-213ENST00000523824 MST1RQ04912 1400 aa12.17□□□□□ -0.46
NSMCE2-213ENST00000523824 NGLY1Q96IV0 654 aa12.16□□□□□ -0.46
NSMCE2-213ENST00000523824 IQGAP3Q86VI3 1631 aa12.15□□□□□ -0.46
NSMCE2-213ENST00000523824 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
NSMCE2-213ENST00000523824 METP08581 1390 aa12.15□□□□□ -0.46
NSMCE2-213ENST00000523824 PNPLA6Q8IY17 1366 aa12.14□□□□□ -0.47
NSMCE2-213ENST00000523824 RGS12O14924 1447 aa12.13□□□□□ -0.47
NSMCE2-213ENST00000523824 SETBP1Q9Y6X0 1596 aa12.13□□□□□ -0.47
NSMCE2-213ENST00000523824 ADGRL3Q9HAR2 1447 aa12.12□□□□□ -0.47
NSMCE2-213ENST00000523824 NHSL1Q5SYE7 1610 aa12.12□□□□□ -0.47
NSMCE2-213ENST00000523824 XRN1Q8IZH2 1706 aaKnown RBP12.12□□□□□ -0.47
NSMCE2-213ENST00000523824 USP21Q9UK80 565 aa12.11□□□□□ -0.47
NSMCE2-213ENST00000523824 NRXN3Q9Y4C0 1643 aa12.11□□□□□ -0.47
NSMCE2-213ENST00000523824 C1orf167Q5SNV9 1468 aa12.09□□□□□ -0.47
NSMCE2-213ENST00000523824 ATAD2Q6PL18 1390 aa12.09□□□□□ -0.47
NSMCE2-213ENST00000523824 ORAI2Q96SN7 254 aa12.09□□□□□ -0.47
NSMCE2-213ENST00000523824 TRPC5Q9UL62 973 aaPredicted RBP12.09□□□□□ -0.47
NSMCE2-213ENST00000523824 SOS2Q07890 1332 aaPredicted RBP12.08□□□□□ -0.48
NSMCE2-213ENST00000523824 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
NSMCE2-213ENST00000523824 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
NSMCE2-213ENST00000523824 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
NSMCE2-213ENST00000523824 FNBP4Q8N3X1 1017 aaPredicted RBP12.06□□□□□ -0.48
NSMCE2-213ENST00000523824 SRCAPQ6ZRS2 3230 aa12.06□□□□□ -0.48
NSMCE2-213ENST00000523824 PPARGC1BQ86YN6 1023 aaKnown RBP12.05□□□□□ -0.48
NSMCE2-213ENST00000523824 NALCNQ8IZF0 1738 aa12.05□□□□□ -0.48
NSMCE2-213ENST00000523824 NEXMIFQ5QGS0 1516 aa12.05□□□□□ -0.48
NSMCE2-213ENST00000523824 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
NSMCE2-213ENST00000523824 PTCH1Q13635 1447 aa12.04□□□□□ -0.48
NSMCE2-213ENST00000523824 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
NSMCE2-213ENST00000523824 CCDC125Q86Z20 511 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms