RNA–Protein interactions for RNA: ENST00000523599.1

IKBKB-229, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 1,595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-229ENST00000523599 SENP3Q9H4L4 574 aaPredicted RBP28.45■■■□□ 2.14
IKBKB-229ENST00000523599 KIF1BO60333 1816 aa28.41■■■□□ 2.14
IKBKB-229ENST00000523599 SLC26A8Q96RN1 970 aa28.41■■■□□ 2.14
IKBKB-229ENST00000523599 LRRC7Q96NW7 1537 aa28.41■■■□□ 2.14
IKBKB-229ENST00000523599 UBAP1LF5GYI3 381 aa28.4■■■□□ 2.14
IKBKB-229ENST00000523599 SLC4A1APQ9BWU0 796 aaKnown RBP28.4■■■□□ 2.14
IKBKB-229ENST00000523599 XIRP1Q702N8 1843 aaKnown RBP28.39■■■□□ 2.14
IKBKB-229ENST00000523599 PPP1R15AO75807 674 aaPredicted RBP28.39■■■□□ 2.14
IKBKB-229ENST00000523599 NUTM2DQ5VT03 806 aaPredicted RBP28.39■■■□□ 2.14
IKBKB-229ENST00000523599 PLEKHG1Q9ULL1 1385 aa28.38■■■□□ 2.13
IKBKB-229ENST00000523599 BCANQ96GW7 911 aa28.37■■■□□ 2.13
IKBKB-229ENST00000523599 SETD5Q9C0A6 1442 aa28.34■■■□□ 2.13
IKBKB-229ENST00000523599 HDGFP51858 240 aaKnown RBP28.34■■■□□ 2.13
IKBKB-229ENST00000523599 PCGF6Q9BYE7 350 aa28.34■■■□□ 2.13
IKBKB-229ENST00000523599 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.33■■■□□ 2.13
IKBKB-229ENST00000523599 CHD2O14647 1828 aaKnown RBP28.32■■■□□ 2.12
IKBKB-229ENST00000523599 FOXD1Q16676 465 aa28.32■■■□□ 2.12
IKBKB-229ENST00000523599 NWD1Q149M9 1564 aa28.32■■■□□ 2.12
IKBKB-229ENST00000523599 ALKQ9UM73 1620 aa28.31■■■□□ 2.12
IKBKB-229ENST00000523599 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
IKBKB-229ENST00000523599 NEXMIFQ5QGS0 1516 aa28.28■■■□□ 2.12
IKBKB-229ENST00000523599 ADAMTS13Q76LX8 1427 aa28.28■■■□□ 2.12
IKBKB-229ENST00000523599 KCNA6P17658 529 aa28.27■■■□□ 2.12
IKBKB-229ENST00000523599 NRXN3Q9Y4C0 1643 aa28.26■■■□□ 2.12
IKBKB-229ENST00000523599 DIP2AQ14689 1571 aa28.26■■■□□ 2.12
IKBKB-229ENST00000523599 RAB3GAP2Q9H2M9 1393 aa28.26■■■□□ 2.11
IKBKB-229ENST00000523599 MPHOSPH9Q99550 1183 aa28.26■■■□□ 2.11
IKBKB-229ENST00000523599 TOM1O60784 492 aa28.24■■■□□ 2.11
IKBKB-229ENST00000523599 PIP4K2BP78356 416 aa28.24■■■□□ 2.11
IKBKB-229ENST00000523599 SCAF1Q9H7N4 1312 aaKnown RBP28.23■■■□□ 2.11
IKBKB-229ENST00000523599 NKTRP30414 1462 aaKnown RBP28.23■■■□□ 2.11
IKBKB-229ENST00000523599 TBX22Q9Y458 520 aa28.21■■■□□ 2.11
IKBKB-229ENST00000523599 SETBP1Q9Y6X0 1596 aa28.21■■■□□ 2.11
IKBKB-229ENST00000523599 TMEM94Q12767 1356 aa28.21■■■□□ 2.11
IKBKB-229ENST00000523599 RBM33Q96EV2 1170 aaKnown RBP28.2■■■□□ 2.11
IKBKB-229ENST00000523599 PPLO60437 1756 aa28.19■■■□□ 2.1
IKBKB-229ENST00000523599 PROSER2Q86WR7 435 aaPredicted RBP28.17■■■□□ 2.1
IKBKB-229ENST00000523599 CCDC144AA2RUR9 1427 aa28.16■■■□□ 2.1
IKBKB-229ENST00000523599 ACIN1Q9UKV3 1341 aaKnown RBP28.14■■■□□ 2.09
IKBKB-229ENST00000523599 PIK3R4Q99570 1358 aa28.12■■■□□ 2.09
IKBKB-229ENST00000523599 PTPRUQ92729 1446 aa28.12■■■□□ 2.09
IKBKB-229ENST00000523599 XRN1Q8IZH2 1706 aaKnown RBP28.1■■■□□ 2.09
IKBKB-229ENST00000523599 SETD1AO15047 1707 aaKnown RBP28.1■■■□□ 2.09
IKBKB-229ENST00000523599 IFT172Q9UG01 1749 aa28.1■■■□□ 2.09
IKBKB-229ENST00000523599 HSPA1LP34931 641 aa28.08■■■□□ 2.09
IKBKB-229ENST00000523599 SPATA31E1Q6ZUB1 1445 aa28.08■■■□□ 2.09
IKBKB-229ENST00000523599 METP08581 1390 aa28.07■■■□□ 2.08
IKBKB-229ENST00000523599 RPGRIP1LQ68CZ1 1315 aa28.06■■■□□ 2.08
IKBKB-229ENST00000523599 AMOTL2Q9Y2J4 779 aa28.06■■■□□ 2.08
IKBKB-229ENST00000523599 VGFO15240 615 aaPredicted RBP28.04■■■□□ 2.08
IKBKB-229ENST00000523599 RGL3Q3MIN7 710 aa28.03■■■□□ 2.08
IKBKB-229ENST00000523599 MSH6P52701 1360 aa28.03■■■□□ 2.08
IKBKB-229ENST00000523599 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.01■■■□□ 2.07
IKBKB-229ENST00000523599 ROBO1Q9Y6N7 1651 aa27.99■■■□□ 2.07
IKBKB-229ENST00000523599 HRCP23327 699 aa27.98■■■□□ 2.07
IKBKB-229ENST00000523599 C14orf37Q86TY3 774 aa27.98■■■□□ 2.07
IKBKB-229ENST00000523599 NCOA3Q9Y6Q9 1424 aa27.97■■■□□ 2.07
IKBKB-229ENST00000523599 ADGRF5Q8IZF2 1346 aa27.96■■■□□ 2.07
IKBKB-229ENST00000523599 ANKRD30BQ9BXX2 1392 aa27.94■■■□□ 2.06
IKBKB-229ENST00000523599 FAM135BQ49AJ0 1406 aa27.93■■■□□ 2.06
IKBKB-229ENST00000523599 NALCNQ8IZF0 1738 aa27.92■■■□□ 2.06
IKBKB-229ENST00000523599 SLAIN2Q9P270 581 aa27.89■■■□□ 2.05
IKBKB-229ENST00000523599 DISP3Q9P2K9 1392 aa27.89■■■□□ 2.05
IKBKB-229ENST00000523599 C19orf44Q9H6X5 657 aa27.88■■■□□ 2.05
IKBKB-229ENST00000523599 PIK3C2GO75747 1445 aa27.87■■■□□ 2.05
IKBKB-229ENST00000523599 PTCH1Q13635 1447 aa27.86■■■□□ 2.05
IKBKB-229ENST00000523599 ASXL1Q8IXJ9 1541 aa27.86■■■□□ 2.05
IKBKB-229ENST00000523599 ROBO2Q9HCK4 1378 aa27.85■■■□□ 2.05
IKBKB-229ENST00000523599 ATF3P18847 181 aa27.85■■■□□ 2.05
IKBKB-229ENST00000523599 MED1Q15648 1581 aaPredicted RBP27.84■■■□□ 2.05
IKBKB-229ENST00000523599 MYOM2P54296 1465 aa27.84■■■□□ 2.05
IKBKB-229ENST00000523599 PHLPP1O60346 1717 aa27.83■■■□□ 2.05
IKBKB-229ENST00000523599 CADPS2Q86UW7 1296 aa27.83■■■□□ 2.05
IKBKB-229ENST00000523599 PRAG1Q86YV5 1406 aa27.83■■■□□ 2.05
IKBKB-229ENST00000523599 ADGRL3Q9HAR2 1447 aa27.83■■■□□ 2.05
IKBKB-229ENST00000523599 DCCP43146 1447 aa27.82■■■□□ 2.04
IKBKB-229ENST00000523599 NRXN1Q9ULB1 1477 aa27.82■■■□□ 2.04
IKBKB-229ENST00000523599 KNDC1Q76NI1 1749 aa27.79■■■□□ 2.04
IKBKB-229ENST00000523599 LAMC1P11047 1609 aa27.79■■■□□ 2.04
IKBKB-229ENST00000523599 TMEM132EQ6IEE7 984 aa27.77■■■□□ 2.04
IKBKB-229ENST00000523599 MST1RQ04912 1400 aa27.76■■■□□ 2.03
IKBKB-229ENST00000523599 STK26Q9P289 416 aa27.76■■■□□ 2.03
IKBKB-229ENST00000523599 COL16A1Q07092 1604 aaPredicted RBP27.74■■■□□ 2.03
IKBKB-229ENST00000523599 LRPPRCP42704 1394 aaKnown RBP27.74■■■□□ 2.03
IKBKB-229ENST00000523599 TECPR2O15040 1411 aa27.73■■■□□ 2.03
IKBKB-229ENST00000523599 CFAP70Q5T0N1 1121 aa27.72■■■□□ 2.03
IKBKB-229ENST00000523599 C14orf93Q9H972 538 aaKnown RBP27.72■■■□□ 2.03
IKBKB-229ENST00000523599 AHDC1Q5TGY3 1603 aaPredicted RBP27.71■■■□□ 2.03
IKBKB-229ENST00000523599 YTHDC2Q9H6S0 1430 aaKnown RBP27.71■■■□□ 2.03
IKBKB-229ENST00000523599 BRINP3Q76B58 766 aa27.7■■■□□ 2.03
IKBKB-229ENST00000523599 DCAF11Q8TEB1 546 aa27.69■■■□□ 2.02
IKBKB-229ENST00000523599 KDM2AQ9Y2K7 1162 aa27.69■■■□□ 2.02
IKBKB-229ENST00000523599 DHX57Q6P158 1386 aaKnown RBP27.69■■■□□ 2.02
IKBKB-229ENST00000523599 ABCC11Q96J66 1382 aa27.68■■■□□ 2.02
IKBKB-229ENST00000523599 NHSL1Q5SYE7 1610 aa27.67■■■□□ 2.02
IKBKB-229ENST00000523599 WAPLQ7Z5K2 1190 aa27.67■■■□□ 2.02
IKBKB-229ENST00000523599 PLEKHH1Q9ULM0 1364 aa27.66■■■□□ 2.02
IKBKB-229ENST00000523599 CDC42BPGQ6DT37 1551 aa27.65■■■□□ 2.02
IKBKB-229ENST00000523599 ILDR2Q71H61 639 aa27.65■■■□□ 2.02
IKBKB-229ENST00000523599 C1orf167Q5SNV9 1468 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms