RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
PTPN12-215ENST00000522115 BCAMP50895 628 aa10.17□□□□□ -0.78
PTPN12-215ENST00000522115 AMHR2Q16671 573 aa10.17□□□□□ -0.78
PTPN12-215ENST00000522115 NYAP1Q6ZVC0 841 aa10.17□□□□□ -0.78
PTPN12-215ENST00000522115 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
PTPN12-215ENST00000522115 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
PTPN12-215ENST00000522115 TSR3Q9UJK0 312 aaKnown RBP10.17□□□□□ -0.78
PTPN12-215ENST00000522115 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
PTPN12-215ENST00000522115 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
PTPN12-215ENST00000522115 TRIM66O15016 1216 aa10.13□□□□□ -0.79
PTPN12-215ENST00000522115 CLCN1P35523 988 aa10.13□□□□□ -0.79
PTPN12-215ENST00000522115 SLC24A3Q9HC58 644 aa10.13□□□□□ -0.79
PTPN12-215ENST00000522115 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
PTPN12-215ENST00000522115 PPP4CP60510 307 aa10.11□□□□□ -0.79
PTPN12-215ENST00000522115 SULF1Q8IWU6 871 aa10.11□□□□□ -0.79
PTPN12-215ENST00000522115 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
PTPN12-215ENST00000522115 WBP1LQ9NX94 342 aa10.11□□□□□ -0.79
PTPN12-215ENST00000522115 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
PTPN12-215ENST00000522115 TPRNQ4KMQ1 711 aa10.1□□□□□ -0.79
PTPN12-215ENST00000522115 NLRP7Q8WX94 980 aa10.1□□□□□ -0.79
PTPN12-215ENST00000522115 PTPN5P54829 565 aa10.09□□□□□ -0.79
PTPN12-215ENST00000522115 RSPH4AQ5TD94 716 aa10.09□□□□□ -0.79
PTPN12-215ENST00000522115 SLC10A3P09131 477 aa10.08□□□□□ -0.8
PTPN12-215ENST00000522115 PRR14Q9BWN1 585 aa10.08□□□□□ -0.8
PTPN12-215ENST00000522115 FAM217BQ9NTX9 383 aaPredicted RBP10.06□□□□□ -0.8
PTPN12-215ENST00000522115 RNF40O75150 1001 aa10.05□□□□□ -0.8
PTPN12-215ENST00000522115 PDE4DQ08499 809 aa10.05□□□□□ -0.8
PTPN12-215ENST00000522115 PARP9Q8IXQ6 854 aa10.05□□□□□ -0.8
PTPN12-215ENST00000522115 REPIN1Q9BWE0 567 aaKnown RBP10.05□□□□□ -0.8
PTPN12-215ENST00000522115 CD46P15529 392 aa10.04□□□□□ -0.8
PTPN12-215ENST00000522115 TTLL12Q14166 644 aaPredicted RBP10.04□□□□□ -0.8
PTPN12-215ENST00000522115 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
PTPN12-215ENST00000522115 APLP1P51693 650 aa10.03□□□□□ -0.8
PTPN12-215ENST00000522115 ACTN4O43707 911 aaKnown RBP10.02□□□□□ -0.81
PTPN12-215ENST00000522115 CFHP08603 1231 aa10.02□□□□□ -0.81
PTPN12-215ENST00000522115 KMT5BQ4FZB7 885 aa10.02□□□□□ -0.81
PTPN12-215ENST00000522115 GIGYF2Q6Y7W6 1299 aaKnown RBP10.02□□□□□ -0.81
PTPN12-215ENST00000522115 GCGRP47871 477 aa10.01□□□□□ -0.81
PTPN12-215ENST00000522115 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
PTPN12-215ENST00000522115 RDH13Q8NBN7 331 aa10□□□□□ -0.81
PTPN12-215ENST00000522115 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
PTPN12-215ENST00000522115 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
PTPN12-215ENST00000522115 USP46P62068 366 aa9.96□□□□□ -0.82
PTPN12-215ENST00000522115 MS4A1P11836 297 aa9.95□□□□□ -0.82
PTPN12-215ENST00000522115 TJAP1Q5JTD0 557 aa9.95□□□□□ -0.82
PTPN12-215ENST00000522115 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
PTPN12-215ENST00000522115 PCDHB3Q9Y5E6 796 aa9.94□□□□□ -0.82
PTPN12-215ENST00000522115 KDM4AO75164 1064 aa9.93□□□□□ -0.82
PTPN12-215ENST00000522115 MTRQ99707 1265 aa9.93□□□□□ -0.82
PTPN12-215ENST00000522115 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
PTPN12-215ENST00000522115 ATP6V1AP38606 617 aa9.92□□□□□ -0.82
PTPN12-215ENST00000522115 FUT2Q10981 343 aa9.92□□□□□ -0.82
PTPN12-215ENST00000522115 KDM4CQ9H3R0 1056 aa9.92□□□□□ -0.82
PTPN12-215ENST00000522115 GRIPAP1Q4V328 841 aa9.91□□□□□ -0.82
PTPN12-215ENST00000522115 MORN1Q5T089 497 aa9.91□□□□□ -0.82
PTPN12-215ENST00000522115 BEGAINQ9BUH8 593 aa9.91□□□□□ -0.82
PTPN12-215ENST00000522115 NR1I2O75469 434 aa9.9□□□□□ -0.82
PTPN12-215ENST00000522115 KCNC4Q03721 635 aa9.9□□□□□ -0.82
PTPN12-215ENST00000522115 DIXDC1Q155Q3 683 aa9.9□□□□□ -0.82
PTPN12-215ENST00000522115 GPBP1L1Q9HC44 474 aaPredicted RBP9.9□□□□□ -0.82
PTPN12-215ENST00000522115 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.82
PTPN12-215ENST00000522115 BLOC1S3Q6QNY0 202 aa9.89□□□□□ -0.83
PTPN12-215ENST00000522115 HOXA2O43364 376 aa9.88□□□□□ -0.83
PTPN12-215ENST00000522115 ZPR1O75312 459 aa9.88□□□□□ -0.83
PTPN12-215ENST00000522115 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
PTPN12-215ENST00000522115 NUTM1Q86Y26 1132 aa9.88□□□□□ -0.83
PTPN12-215ENST00000522115 SPIRE2Q8WWL2 714 aa9.88□□□□□ -0.83
PTPN12-215ENST00000522115 SALL2Q9Y467 1007 aaPredicted RBP9.88□□□□□ -0.83
PTPN12-215ENST00000522115 GJA5P36382 358 aa9.87□□□□□ -0.83
PTPN12-215ENST00000522115 COPS2P61201 443 aa9.87□□□□□ -0.83
PTPN12-215ENST00000522115 SCUBE3Q8IX30 993 aa9.86□□□□□ -0.83
PTPN12-215ENST00000522115 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
PTPN12-215ENST00000522115 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
PTPN12-215ENST00000522115 PUS10Q3MIT2 529 aaKnown RBP9.85□□□□□ -0.83
PTPN12-215ENST00000522115 ZNF516Q92618 1163 aa9.85□□□□□ -0.83
PTPN12-215ENST00000522115 TBC1D2Q9BYX2 928 aa9.85□□□□□ -0.83
PTPN12-215ENST00000522115 THAP11Q96EK4 314 aa9.84□□□□□ -0.83
PTPN12-215ENST00000522115 SLC27A5Q9Y2P5 690 aa9.84□□□□□ -0.83
PTPN12-215ENST00000522115 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
PTPN12-215ENST00000522115 Q3C1V9 767 aa9.82□□□□□ -0.84
PTPN12-215ENST00000522115 RSPH6AQ9H0K4 717 aa9.82□□□□□ -0.84
PTPN12-215ENST00000522115 SPTLC1O15269 473 aa9.81□□□□□ -0.84
PTPN12-215ENST00000522115 BRICD5Q6PL45 260 aa9.81□□□□□ -0.84
PTPN12-215ENST00000522115 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
PTPN12-215ENST00000522115 MOXD2PA6NHM9 499 aa9.8□□□□□ -0.84
PTPN12-215ENST00000522115 ADH1BP00325 375 aa9.8□□□□□ -0.84
PTPN12-215ENST00000522115 TUSC1Q2TAM9 212 aa9.8□□□□□ -0.84
PTPN12-215ENST00000522115 MYSM1Q5VVJ2 828 aa9.8□□□□□ -0.84
PTPN12-215ENST00000522115 A0A0G2JS52 829 aa9.79□□□□□ -0.84
PTPN12-215ENST00000522115 FMNL1O95466 1100 aaPredicted RBP9.79□□□□□ -0.84
PTPN12-215ENST00000522115 FDX1P10109 184 aa9.79□□□□□ -0.84
PTPN12-215ENST00000522115 RSBN1LQ6PCB5 846 aaPredicted RBP9.79□□□□□ -0.84
PTPN12-215ENST00000522115 SH3D19Q5HYK7 790 aa9.78□□□□□ -0.84
PTPN12-215ENST00000522115 NKX2-3Q8TAU0 364 aa9.78□□□□□ -0.84
PTPN12-215ENST00000522115 HLA-CQ95604 372 aa9.78□□□□□ -0.84
PTPN12-215ENST00000522115 GOPCQ9HD26 462 aa9.78□□□□□ -0.84
PTPN12-215ENST00000522115 TLL1O43897 1013 aa9.77□□□□□ -0.85
PTPN12-215ENST00000522115 SPSB2Q99619 263 aa9.77□□□□□ -0.85
PTPN12-215ENST00000522115 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
PTPN12-215ENST00000522115 NDUFV2P19404 249 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms