RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 SPINK5Q9NQ38 1064 aaPredicted RBP22.86■■□□□ 1.25
TRAM1-205ENST00000521425 SMG6Q86US8 1419 aaKnown RBP22.85■■□□□ 1.25
TRAM1-205ENST00000521425 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
TRAM1-205ENST00000521425 DMRT2Q9Y5R5 561 aa22.83■■□□□ 1.25
TRAM1-205ENST00000521425 ARID4BQ4LE39 1312 aaPredicted RBP22.83■■□□□ 1.25
TRAM1-205ENST00000521425 KDM5CP41229 1560 aa22.83■■□□□ 1.25
TRAM1-205ENST00000521425 FANCAO15360 1455 aa22.82■■□□□ 1.24
TRAM1-205ENST00000521425 CDCA8Q53HL2 280 aa22.81■■□□□ 1.24
TRAM1-205ENST00000521425 FBXO31Q5XUX0 539 aaPredicted RBP22.81■■□□□ 1.24
TRAM1-205ENST00000521425 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
TRAM1-205ENST00000521425 CDC42BPBQ9Y5S2 1711 aa22.81■■□□□ 1.24
TRAM1-205ENST00000521425 ADGBQ8N7X0 1667 aa22.81■■□□□ 1.24
TRAM1-205ENST00000521425 GOLGA2Q08379 1002 aa22.81■■□□□ 1.24
TRAM1-205ENST00000521425 POGKQ9P215 609 aa22.81■■□□□ 1.24
TRAM1-205ENST00000521425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.8■■□□□ 1.24
TRAM1-205ENST00000521425 GGNBP2Q9H3C7 697 aa22.8■■□□□ 1.24
TRAM1-205ENST00000521425 U2AF1L5P0DN76 240 aaPredicted RBP22.79■■□□□ 1.24
TRAM1-205ENST00000521425 U2AF1Q01081 240 aaKnown RBP eCLIP22.79■■□□□ 1.24
TRAM1-205ENST00000521425 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
TRAM1-205ENST00000521425 UHRF1BP1Q6BDS2 1440 aa22.79■■□□□ 1.24
TRAM1-205ENST00000521425 ADGRL1O94910 1474 aa22.78■■□□□ 1.24
TRAM1-205ENST00000521425 ABCC2Q92887 1545 aa22.78■■□□□ 1.24
TRAM1-205ENST00000521425 SHANK2Q9UPX8 1470 aa22.77■■□□□ 1.24
TRAM1-205ENST00000521425 PKNOX2Q96KN3 472 aa22.76■■□□□ 1.23
TRAM1-205ENST00000521425 MTHFSP49914 203 aa22.75■■□□□ 1.23
TRAM1-205ENST00000521425 PANK1Q8TE04 598 aa22.75■■□□□ 1.23
TRAM1-205ENST00000521425 COG6Q9Y2V7 657 aa22.75■■□□□ 1.23
TRAM1-205ENST00000521425 CENPJQ9HC77 1338 aaPredicted RBP22.74■■□□□ 1.23
TRAM1-205ENST00000521425 ASXL2Q76L83 1435 aa22.73■■□□□ 1.23
TRAM1-205ENST00000521425 PARD3Q8TEW0 1356 aa22.73■■□□□ 1.23
TRAM1-205ENST00000521425 TCERG1O14776 1098 aaKnown RBP22.73■■□□□ 1.23
TRAM1-205ENST00000521425 PLEKHH1Q9ULM0 1364 aa22.72■■□□□ 1.23
TRAM1-205ENST00000521425 PDE4AP27815 886 aa22.72■■□□□ 1.23
TRAM1-205ENST00000521425 FAM69CQ0P6D2 419 aa22.72■■□□□ 1.23
TRAM1-205ENST00000521425 BRPF3Q9ULD4 1205 aa22.72■■□□□ 1.23
TRAM1-205ENST00000521425 DAXXQ9UER7 740 aaPredicted RBP22.72■■□□□ 1.23
TRAM1-205ENST00000521425 NEFMP07197 916 aa22.7■■□□□ 1.23
TRAM1-205ENST00000521425 TNNQ9UQP3 1299 aa22.7■■□□□ 1.23
TRAM1-205ENST00000521425 NOS1P29475 1434 aa22.7■■□□□ 1.22
TRAM1-205ENST00000521425 IDI1Q13907 227 aa22.7■■□□□ 1.22
TRAM1-205ENST00000521425 ARXQ96QS3 562 aa22.69■■□□□ 1.22
TRAM1-205ENST00000521425 MAGI2Q86UL8 1455 aa22.69■■□□□ 1.22
TRAM1-205ENST00000521425 CROCC2H7BZ55 1655 aa22.68■■□□□ 1.22
TRAM1-205ENST00000521425 KDM5DQ9BY66 1539 aa22.68■■□□□ 1.22
TRAM1-205ENST00000521425 ELL2O00472 640 aaPredicted RBP22.67■■□□□ 1.22
TRAM1-205ENST00000521425 ADCY10Q96PN6 1610 aa22.67■■□□□ 1.22
TRAM1-205ENST00000521425 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
TRAM1-205ENST00000521425 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
TRAM1-205ENST00000521425 DUSP27Q5VZP5 1158 aa22.65■■□□□ 1.22
TRAM1-205ENST00000521425 CD109Q6YHK3 1445 aa22.65■■□□□ 1.22
TRAM1-205ENST00000521425 DUOX2Q9NRD8 1548 aa22.65■■□□□ 1.22
TRAM1-205ENST00000521425 TSR2Q969E8 191 aaKnown RBP22.65■■□□□ 1.22
TRAM1-205ENST00000521425 ESF1Q9H501 851 aaKnown RBP22.64■■□□□ 1.21
TRAM1-205ENST00000521425 WAPLQ7Z5K2 1190 aa22.64■■□□□ 1.21
TRAM1-205ENST00000521425 PDE3BQ13370 1112 aa22.63■■□□□ 1.21
TRAM1-205ENST00000521425 TCP11L2Q8N4U5 519 aa22.63■■□□□ 1.21
TRAM1-205ENST00000521425 SLC24A1O60721 1099 aa22.63■■□□□ 1.21
TRAM1-205ENST00000521425 PRAM1Q96QH2 718 aa22.63■■□□□ 1.21
TRAM1-205ENST00000521425 IPO9Q96P70 1041 aaKnown RBP22.62■■□□□ 1.21
TRAM1-205ENST00000521425 COL17A1Q9UMD9 1497 aaPredicted RBP22.61■■□□□ 1.21
TRAM1-205ENST00000521425 EIF3AQ14152 1382 aaKnown RBP22.61■■□□□ 1.21
TRAM1-205ENST00000521425 WDR7Q9Y4E6 1490 aa22.61■■□□□ 1.21
TRAM1-205ENST00000521425 ARHGEF5Q12774 1597 aa22.61■■□□□ 1.21
TRAM1-205ENST00000521425 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
TRAM1-205ENST00000521425 ATP10AO60312 1499 aa22.6■■□□□ 1.21
TRAM1-205ENST00000521425 SPRYD3Q8NCJ5 442 aa22.59■■□□□ 1.21
TRAM1-205ENST00000521425 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.59■■□□□ 1.21
TRAM1-205ENST00000521425 NSD3Q9BZ95 1437 aa22.58■■□□□ 1.21
TRAM1-205ENST00000521425 NCKAP5LQ9HCH0 1330 aa22.58■■□□□ 1.2
TRAM1-205ENST00000521425 HMOX1P09601 288 aa22.58■■□□□ 1.2
TRAM1-205ENST00000521425 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
TRAM1-205ENST00000521425 CFAP53Q96M91 514 aa22.55■■□□□ 1.2
TRAM1-205ENST00000521425 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
TRAM1-205ENST00000521425 GPRASP1Q5JY77 1395 aa22.54■■□□□ 1.2
TRAM1-205ENST00000521425 VGFO15240 615 aaPredicted RBP22.54■■□□□ 1.2
TRAM1-205ENST00000521425 CABP1Q9NZU7 370 aa22.54■■□□□ 1.2
TRAM1-205ENST00000521425 SLFN5Q08AF3 891 aa22.53■■□□□ 1.2
TRAM1-205ENST00000521425 THUMPD2Q9BTF0 503 aaKnown RBP22.53■■□□□ 1.2
TRAM1-205ENST00000521425 WWC1Q8IX03 1113 aa22.52■■□□□ 1.2
TRAM1-205ENST00000521425 RNF123Q5XPI4 1314 aa22.51■■□□□ 1.19
TRAM1-205ENST00000521425 MAST1Q9Y2H9 1570 aa22.51■■□□□ 1.19
TRAM1-205ENST00000521425 TXNDC2Q86VQ3 553 aa22.5■■□□□ 1.19
TRAM1-205ENST00000521425 ZRANB1Q9UGI0 708 aa22.49■■□□□ 1.19
TRAM1-205ENST00000521425 ABCC1P33527 1531 aa22.49■■□□□ 1.19
TRAM1-205ENST00000521425 FTSJ3Q8IY81 847 aaKnown RBP22.49■■□□□ 1.19
TRAM1-205ENST00000521425 CGNL1Q0VF96 1302 aa22.48■■□□□ 1.19
TRAM1-205ENST00000521425 VSIG10Q8N0Z9 540 aa22.48■■□□□ 1.19
TRAM1-205ENST00000521425 EVC2Q86UK5 1308 aa22.48■■□□□ 1.19
TRAM1-205ENST00000521425 IGHDP01880 384 aa22.48■■□□□ 1.19
TRAM1-205ENST00000521425 TRPM1Q7Z4N2 1603 aa22.47■■□□□ 1.19
TRAM1-205ENST00000521425 MAPK8IP3Q9UPT6 1336 aa22.47■■□□□ 1.19
TRAM1-205ENST00000521425 ATP7AQ04656 1500 aa22.47■■□□□ 1.19
TRAM1-205ENST00000521425 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
TRAM1-205ENST00000521425 C14orf93Q9H972 538 aaKnown RBP22.47■■□□□ 1.19
TRAM1-205ENST00000521425 BACH2Q9BYV9 841 aa22.46■■□□□ 1.19
TRAM1-205ENST00000521425 E9PSI1 815 aa22.45■■□□□ 1.18
TRAM1-205ENST00000521425 RBM33Q96EV2 1170 aaKnown RBP22.44■■□□□ 1.18
TRAM1-205ENST00000521425 SMC4Q9NTJ3 1288 aa22.44■■□□□ 1.18
TRAM1-205ENST00000521425 RLBP1P12271 317 aa22.42■■□□□ 1.18
TRAM1-205ENST00000521425 CEBPAP49715 358 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms