RNA–Protein interactions for RNA: ENST00000517561.1

AP3B1-202, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-202ENST00000517561 TMEM134Q9H6X4 195 aa12.89□□□□□ -0.35
AP3B1-202ENST00000517561 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
AP3B1-202ENST00000517561 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
AP3B1-202ENST00000517561 RNF40O75150 1001 aa12.87□□□□□ -0.35
AP3B1-202ENST00000517561 WBP1LQ9NX94 342 aa12.87□□□□□ -0.35
AP3B1-202ENST00000517561 TSR3Q9UJK0 312 aaKnown RBP12.86□□□□□ -0.35
AP3B1-202ENST00000517561 PPP4CP60510 307 aa12.84□□□□□ -0.35
AP3B1-202ENST00000517561 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
AP3B1-202ENST00000517561 SLC4A3P48751 1232 aa12.8□□□□□ -0.36
AP3B1-202ENST00000517561 DAXXQ9UER7 740 aaPredicted RBP12.79□□□□□ -0.36
AP3B1-202ENST00000517561 SLC24A3Q9HC58 644 aa12.78□□□□□ -0.36
AP3B1-202ENST00000517561 MDM2Q00987 491 aaPredicted RBP12.77□□□□□ -0.37
AP3B1-202ENST00000517561 AK7Q96M32 723 aa12.76□□□□□ -0.37
AP3B1-202ENST00000517561 SLC10A3P09131 477 aa12.75□□□□□ -0.37
AP3B1-202ENST00000517561 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
AP3B1-202ENST00000517561 APLP1P51693 650 aa12.74□□□□□ -0.37
AP3B1-202ENST00000517561 DDX11L8A8MPP1 907 aa12.73□□□□□ -0.37
AP3B1-202ENST00000517561 NECTIN2Q92692 538 aa12.73□□□□□ -0.37
AP3B1-202ENST00000517561 TRIM66O15016 1216 aa12.72□□□□□ -0.37
AP3B1-202ENST00000517561 CLCN1P35523 988 aa12.7□□□□□ -0.38
AP3B1-202ENST00000517561 RDH13Q8NBN7 331 aa12.7□□□□□ -0.38
AP3B1-202ENST00000517561 REPIN1Q9BWE0 567 aaKnown RBP12.7□□□□□ -0.38
AP3B1-202ENST00000517561 CFHP08603 1231 aa12.69□□□□□ -0.38
AP3B1-202ENST00000517561 AMHR2Q16671 573 aa12.69□□□□□ -0.38
AP3B1-202ENST00000517561 RSPH4AQ5TD94 716 aa12.69□□□□□ -0.38
AP3B1-202ENST00000517561 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
AP3B1-202ENST00000517561 TMUB1Q9BVT8 246 aa12.69□□□□□ -0.38
AP3B1-202ENST00000517561 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
AP3B1-202ENST00000517561 TPRNQ4KMQ1 711 aa12.68□□□□□ -0.38
AP3B1-202ENST00000517561 TTLL12Q14166 644 aaPredicted RBP12.67□□□□□ -0.38
AP3B1-202ENST00000517561 PLA2G2EQ9NZK7 142 aa12.66□□□□□ -0.38
AP3B1-202ENST00000517561 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
AP3B1-202ENST00000517561 PRR14Q9BWN1 585 aa12.64□□□□□ -0.39
AP3B1-202ENST00000517561 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
AP3B1-202ENST00000517561 ACTN4O43707 911 aaKnown RBP12.63□□□□□ -0.39
AP3B1-202ENST00000517561 CD46P15529 392 aa12.62□□□□□ -0.39
AP3B1-202ENST00000517561 GCGRP47871 477 aa12.62□□□□□ -0.39
AP3B1-202ENST00000517561 PDE4DQ08499 809 aa12.62□□□□□ -0.39
AP3B1-202ENST00000517561 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
AP3B1-202ENST00000517561 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
AP3B1-202ENST00000517561 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
AP3B1-202ENST00000517561 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
AP3B1-202ENST00000517561 GIGYF2Q6Y7W6 1299 aaKnown RBP12.61□□□□□ -0.39
AP3B1-202ENST00000517561 MTRQ99707 1265 aa12.61□□□□□ -0.39
AP3B1-202ENST00000517561 PCDHB3Q9Y5E6 796 aa12.61□□□□□ -0.39
AP3B1-202ENST00000517561 COPS2P61201 443 aa12.6□□□□□ -0.39
AP3B1-202ENST00000517561 KCNC4Q03721 635 aa12.58□□□□□ -0.4
AP3B1-202ENST00000517561 BLOC1S3Q6QNY0 202 aa12.58□□□□□ -0.4
AP3B1-202ENST00000517561 FUT2Q10981 343 aa12.57□□□□□ -0.4
AP3B1-202ENST00000517561 ZNF516Q92618 1163 aa12.57□□□□□ -0.4
AP3B1-202ENST00000517561 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
AP3B1-202ENST00000517561 PUS10Q3MIT2 529 aaKnown RBP12.56□□□□□ -0.4
AP3B1-202ENST00000517561 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
AP3B1-202ENST00000517561 MS4A1P11836 297 aa12.53□□□□□ -0.4
AP3B1-202ENST00000517561 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
AP3B1-202ENST00000517561 KDM4AO75164 1064 aa12.52□□□□□ -0.41
AP3B1-202ENST00000517561 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
AP3B1-202ENST00000517561 ZPR1O75312 459 aa12.51□□□□□ -0.41
AP3B1-202ENST00000517561 MORN1Q5T089 497 aa12.5□□□□□ -0.41
AP3B1-202ENST00000517561 NKX2-3Q8TAU0 364 aa12.5□□□□□ -0.41
AP3B1-202ENST00000517561 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
AP3B1-202ENST00000517561 NR1I2O75469 434 aa12.49□□□□□ -0.41
AP3B1-202ENST00000517561 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
AP3B1-202ENST00000517561 GPBP1L1Q9HC44 474 aaPredicted RBP12.49□□□□□ -0.41
AP3B1-202ENST00000517561 NUTM1Q86Y26 1132 aa12.48□□□□□ -0.41
AP3B1-202ENST00000517561 GRIPAP1Q4V328 841 aa12.47□□□□□ -0.41
AP3B1-202ENST00000517561 SLC27A5Q9Y2P5 690 aa12.47□□□□□ -0.41
AP3B1-202ENST00000517561 TLL1O43897 1013 aa12.46□□□□□ -0.41
AP3B1-202ENST00000517561 SPIRE2Q8WWL2 714 aa12.46□□□□□ -0.41
AP3B1-202ENST00000517561 HLA-CQ95604 372 aa12.46□□□□□ -0.41
AP3B1-202ENST00000517561 USP46P62068 366 aa12.45□□□□□ -0.42
AP3B1-202ENST00000517561 KDM4CQ9H3R0 1056 aa12.45□□□□□ -0.42
AP3B1-202ENST00000517561 HOXA2O43364 376 aa12.44□□□□□ -0.42
AP3B1-202ENST00000517561 A0A0G2JS52 829 aa12.43□□□□□ -0.42
AP3B1-202ENST00000517561 GUCA2AQ02747 115 aa12.41□□□□□ -0.42
AP3B1-202ENST00000517561 TBC1D2Q9BYX2 928 aa12.41□□□□□ -0.42
AP3B1-202ENST00000517561 NDUFV2P19404 249 aa12.4□□□□□ -0.42
AP3B1-202ENST00000517561 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
AP3B1-202ENST00000517561 THAP11Q96EK4 314 aa12.39□□□□□ -0.43
AP3B1-202ENST00000517561 SPSB2Q99619 263 aa12.39□□□□□ -0.43
AP3B1-202ENST00000517561 MOXD2PA6NHM9 499 aa12.38□□□□□ -0.43
AP3B1-202ENST00000517561 ADH1BP00325 375 aa12.38□□□□□ -0.43
AP3B1-202ENST00000517561 PPP1R18Q6NYC8 613 aa12.38□□□□□ -0.43
AP3B1-202ENST00000517561 BRICD5Q6PL45 260 aa12.38□□□□□ -0.43
AP3B1-202ENST00000517561 RNF19BQ6ZMZ0 732 aa12.38□□□□□ -0.43
AP3B1-202ENST00000517561 FMNL1O95466 1100 aaPredicted RBP12.37□□□□□ -0.43
AP3B1-202ENST00000517561 FAM117AQ9C073 453 aa12.37□□□□□ -0.43
AP3B1-202ENST00000517561 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
AP3B1-202ENST00000517561 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
AP3B1-202ENST00000517561 FDX1P10109 184 aa12.35□□□□□ -0.43
AP3B1-202ENST00000517561 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
AP3B1-202ENST00000517561 Q3C1V9 767 aa12.35□□□□□ -0.43
AP3B1-202ENST00000517561 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
AP3B1-202ENST00000517561 S1PR4O95977 384 aa12.34□□□□□ -0.43
AP3B1-202ENST00000517561 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.34□□□□□ -0.43
AP3B1-202ENST00000517561 FAM160A2Q8N612 972 aaPredicted RBP12.33□□□□□ -0.44
AP3B1-202ENST00000517561 SYMPKQ92797 1274 aaKnown RBP12.33□□□□□ -0.44
AP3B1-202ENST00000517561 SLC6A16Q9GZN6 736 aa12.33□□□□□ -0.44
AP3B1-202ENST00000517561 MYSM1Q5VVJ2 828 aa12.32□□□□□ -0.44
AP3B1-202ENST00000517561 GGCXP38435 758 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms