RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 FBXO22Q8NEZ5 403 aa8.74□□□□□ -1.01
SCARNA6.1-201ENST00000516989 PHF8Q9UPP1 1060 aa8.74□□□□□ -1.01
SCARNA6.1-201ENST00000516989 RTEL1-TNFRSF6BF6WH68 1400 aa8.73□□□□□ -1.01
SCARNA6.1-201ENST00000516989 DAPK1P53355 1430 aa8.73□□□□□ -1.01
SCARNA6.1-201ENST00000516989 E2F4Q16254 413 aa8.73□□□□□ -1.01
SCARNA6.1-201ENST00000516989 GGT6Q6P531 493 aa8.73□□□□□ -1.01
SCARNA6.1-201ENST00000516989 KIF12Q96FN5 646 aa8.73□□□□□ -1.01
SCARNA6.1-201ENST00000516989 KDM5CP41229 1560 aa8.73□□□□□ -1.01
SCARNA6.1-201ENST00000516989 C9orf84Q5VXU9 1444 aa8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 RRBP1Q9P2E9 1410 aaKnown RBP8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ZMYM4Q5VZL5 1548 aa8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 KIF3BO15066 747 aa8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ARHGEF5Q12774 1597 aa8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 DHX29Q7Z478 1369 aaKnown RBP8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ANKRD30AQ9BXX3 1397 aa8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.72□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ATP7AQ04656 1500 aa8.71□□□□□ -1.01
SCARNA6.1-201ENST00000516989 HECW2Q9P2P5 1572 aa8.71□□□□□ -1.02
SCARNA6.1-201ENST00000516989 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.02
SCARNA6.1-201ENST00000516989 A2MP01023 1474 aa8.7□□□□□ -1.02
SCARNA6.1-201ENST00000516989 PTPRKQ15262 1439 aa8.7□□□□□ -1.02
SCARNA6.1-201ENST00000516989 KIDINS220Q9ULH0 1771 aa8.69□□□□□ -1.02
SCARNA6.1-201ENST00000516989 KIF15Q9NS87 1388 aa8.69□□□□□ -1.02
SCARNA6.1-201ENST00000516989 ARHGEF40Q8TER5 1519 aa8.69□□□□□ -1.02
SCARNA6.1-201ENST00000516989 NCOA1Q15788 1441 aa8.68□□□□□ -1.02
SCARNA6.1-201ENST00000516989 DIP2CQ9Y2E4 1556 aa8.68□□□□□ -1.02
SCARNA6.1-201ENST00000516989 DNMT1P26358 1616 aaKnown RBP8.68□□□□□ -1.02
SCARNA6.1-201ENST00000516989 SEMA3EO15041 775 aa8.67□□□□□ -1.02
SCARNA6.1-201ENST00000516989 ILDR2Q71H61 639 aa8.67□□□□□ -1.02
SCARNA6.1-201ENST00000516989 ABCA6Q8N139 1617 aa8.67□□□□□ -1.02
SCARNA6.1-201ENST00000516989 SHANK2Q9UPX8 1470 aa8.67□□□□□ -1.02
SCARNA6.1-201ENST00000516989 INO80Q9ULG1 1556 aaPredicted RBP8.66□□□□□ -1.02
SCARNA6.1-201ENST00000516989 WASHC2CQ9Y4E1 1318 aa8.66□□□□□ -1.02
SCARNA6.1-201ENST00000516989 ERICH6Q7L0X2 663 aa8.66□□□□□ -1.02
SCARNA6.1-201ENST00000516989 ZC3H15Q8WU90 426 aaKnown RBP8.66□□□□□ -1.02
SCARNA6.1-201ENST00000516989 MAST1Q9Y2H9 1570 aa8.65□□□□□ -1.02
SCARNA6.1-201ENST00000516989 ROCK1Q13464 1354 aa8.65□□□□□ -1.02
SCARNA6.1-201ENST00000516989 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
SCARNA6.1-201ENST00000516989 PDE4AP27815 886 aa8.65□□□□□ -1.02
SCARNA6.1-201ENST00000516989 CEBPAP49715 358 aaPredicted RBP8.65□□□□□ -1.02
SCARNA6.1-201ENST00000516989 LARP6Q9BRS8 491 aaKnown RBP8.65□□□□□ -1.02
SCARNA6.1-201ENST00000516989 DUOX2Q9NRD8 1548 aa8.64□□□□□ -1.03
SCARNA6.1-201ENST00000516989 ANKRD50Q9ULJ7 1429 aa8.64□□□□□ -1.03
SCARNA6.1-201ENST00000516989 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
SCARNA6.1-201ENST00000516989 TRIM26Q12899 539 aaPredicted RBP8.64□□□□□ -1.03
SCARNA6.1-201ENST00000516989 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
SCARNA6.1-201ENST00000516989 AGLP35573 1532 aa8.64□□□□□ -1.03
SCARNA6.1-201ENST00000516989 ADGBQ8N7X0 1667 aa8.63□□□□□ -1.03
SCARNA6.1-201ENST00000516989 BRPF1P55201 1214 aaPredicted RBP8.63□□□□□ -1.03
SCARNA6.1-201ENST00000516989 PIP4P2Q8N4L2 257 aa8.63□□□□□ -1.03
SCARNA6.1-201ENST00000516989 ZRANB1Q9UGI0 708 aa8.63□□□□□ -1.03
SCARNA6.1-201ENST00000516989 REREQ9P2R6 1566 aa8.63□□□□□ -1.03
SCARNA6.1-201ENST00000516989 ADGRL2O95490 1459 aa8.63□□□□□ -1.03
SCARNA6.1-201ENST00000516989 ZMYM3Q14202 1370 aa8.62□□□□□ -1.03
SCARNA6.1-201ENST00000516989 MS4A4AQ96JQ5 239 aa8.62□□□□□ -1.03
SCARNA6.1-201ENST00000516989 SIGLEC1Q9BZZ2 1709 aa8.62□□□□□ -1.03
SCARNA6.1-201ENST00000516989 ERBINQ96RT1 1412 aa8.62□□□□□ -1.03
SCARNA6.1-201ENST00000516989 KANK1Q14678 1352 aa8.61□□□□□ -1.03
SCARNA6.1-201ENST00000516989 PLXNC1O60486 1568 aa8.61□□□□□ -1.03
SCARNA6.1-201ENST00000516989 BCORL1Q5H9F3 1711 aa8.61□□□□□ -1.03
SCARNA6.1-201ENST00000516989 FBXO41Q8TF61 875 aa8.61□□□□□ -1.03
SCARNA6.1-201ENST00000516989 CROCC2H7BZ55 1655 aa8.61□□□□□ -1.03
SCARNA6.1-201ENST00000516989 NUP155O75694 1391 aa8.61□□□□□ -1.03
SCARNA6.1-201ENST00000516989 MFSD10Q14728 455 aa8.6□□□□□ -1.03
SCARNA6.1-201ENST00000516989 CHRDL2Q6WN34 429 aa8.6□□□□□ -1.03
SCARNA6.1-201ENST00000516989 SLC24A3Q9HC58 644 aa8.6□□□□□ -1.03
SCARNA6.1-201ENST00000516989 NAIPQ13075 1403 aa8.6□□□□□ -1.03
SCARNA6.1-201ENST00000516989 PTPRMP28827 1452 aa8.59□□□□□ -1.03
SCARNA6.1-201ENST00000516989 GOLGA2Q08379 1002 aa8.59□□□□□ -1.03
SCARNA6.1-201ENST00000516989 FBXO31Q5XUX0 539 aaPredicted RBP8.59□□□□□ -1.03
SCARNA6.1-201ENST00000516989 SMYD5Q6GMV2 418 aa8.59□□□□□ -1.03
SCARNA6.1-201ENST00000516989 PHF12Q96QT6 1004 aa8.59□□□□□ -1.03
SCARNA6.1-201ENST00000516989 CNTLNQ9NXG0 1405 aa8.59□□□□□ -1.03
SCARNA6.1-201ENST00000516989 MADDQ8WXG6 1647 aa8.58□□□□□ -1.04
SCARNA6.1-201ENST00000516989 HFM1A2PYH4 1435 aa8.58□□□□□ -1.04
SCARNA6.1-201ENST00000516989 SETD5Q9C0A6 1442 aa8.58□□□□□ -1.04
SCARNA6.1-201ENST00000516989 CD44P16070 742 aaKnown RBP8.58□□□□□ -1.04
SCARNA6.1-201ENST00000516989 DDX27Q96GQ7 796 aaKnown RBP8.58□□□□□ -1.04
SCARNA6.1-201ENST00000516989 CRISPLD2Q9H0B8 497 aa8.58□□□□□ -1.04
SCARNA6.1-201ENST00000516989 ADAMTSL3P82987 1691 aa8.58□□□□□ -1.04
SCARNA6.1-201ENST00000516989 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
SCARNA6.1-201ENST00000516989 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
SCARNA6.1-201ENST00000516989 RIMS1Q86UR5 1692 aaKnown RBP8.56□□□□□ -1.04
SCARNA6.1-201ENST00000516989 PCGF6Q9BYE7 350 aa8.56□□□□□ -1.04
SCARNA6.1-201ENST00000516989 ARIH1Q9Y4X5 557 aaPredicted RBP8.56□□□□□ -1.04
SCARNA6.1-201ENST00000516989 EIF2AK4Q9P2K8 1649 aaKnown RBP8.55□□□□□ -1.04
SCARNA6.1-201ENST00000516989 ZMYND10O75800 440 aa8.55□□□□□ -1.04
SCARNA6.1-201ENST00000516989 C14orf37Q86TY3 774 aa8.55□□□□□ -1.04
SCARNA6.1-201ENST00000516989 RAB3GAP2Q9H2M9 1393 aa8.55□□□□□ -1.04
SCARNA6.1-201ENST00000516989 FER1L4A9Z1Z3 1794 aa8.55□□□□□ -1.04
SCARNA6.1-201ENST00000516989 ACIN1Q9UKV3 1341 aaKnown RBP8.54□□□□□ -1.04
SCARNA6.1-201ENST00000516989 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
SCARNA6.1-201ENST00000516989 MKRN3Q13064 507 aaKnown RBP8.54□□□□□ -1.04
SCARNA6.1-201ENST00000516989 MPHOSPH9Q99550 1183 aa8.54□□□□□ -1.04
SCARNA6.1-201ENST00000516989 KDM5DQ9BY66 1539 aa8.54□□□□□ -1.04
SCARNA6.1-201ENST00000516989 HRCP23327 699 aa8.53□□□□□ -1.04
SCARNA6.1-201ENST00000516989 CAMK2BQ13554 666 aa8.53□□□□□ -1.04
SCARNA6.1-201ENST00000516989 RNF17Q9BXT8 1623 aaKnown RBP8.53□□□□□ -1.04
SCARNA6.1-201ENST00000516989 ABCC3O15438 1527 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms