RNA–Protein interactions for RNA: ENST00000516960.1

RNU6-943P-201, Transcript of RNA, U6 small nuclear 943, pseudogene, humanhuman

BASIC

Gene RNU6-943P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-943P-201ENST00000516960 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
RNU6-943P-201ENST00000516960 USP35Q9P2H5 1018 aa9.57□□□□□ -0.88
RNU6-943P-201ENST00000516960 WASHC4Q2M389 1173 aa9.56□□□□□ -0.88
RNU6-943P-201ENST00000516960 TYW1BQ6NUM6 668 aa9.56□□□□□ -0.88
RNU6-943P-201ENST00000516960 PPP1R12CQ9BZL4 782 aa9.56□□□□□ -0.88
RNU6-943P-201ENST00000516960 PCDHGA10Q9Y5H3 936 aa9.56□□□□□ -0.88
RNU6-943P-201ENST00000516960 IRX5P78411 483 aaPredicted RBP9.55□□□□□ -0.88
RNU6-943P-201ENST00000516960 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
RNU6-943P-201ENST00000516960 CERKQ8TCT0 537 aa9.55□□□□□ -0.88
RNU6-943P-201ENST00000516960 NDUFB9Q9Y6M9 179 aa9.55□□□□□ -0.88
RNU6-943P-201ENST00000516960 USP17L8P0C7I0 530 aa9.54□□□□□ -0.88
RNU6-943P-201ENST00000516960 LILRB3O75022 631 aa9.53□□□□□ -0.88
RNU6-943P-201ENST00000516960 QPCTQ16769 361 aa9.53□□□□□ -0.88
RNU6-943P-201ENST00000516960 NUTM1Q86Y26 1132 aa9.53□□□□□ -0.88
RNU6-943P-201ENST00000516960 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
RNU6-943P-201ENST00000516960 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.89
RNU6-943P-201ENST00000516960 RBM46Q8TBY0 533 aaKnown RBP9.52□□□□□ -0.89
RNU6-943P-201ENST00000516960 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
RNU6-943P-201ENST00000516960 MOXD2PA6NHM9 499 aa9.51□□□□□ -0.89
RNU6-943P-201ENST00000516960 NUTM2BA6NNL0 878 aaPredicted RBP9.51□□□□□ -0.89
RNU6-943P-201ENST00000516960 NUTM2EB1AL46 878 aaPredicted RBP9.51□□□□□ -0.89
RNU6-943P-201ENST00000516960 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
RNU6-943P-201ENST00000516960 GJA5P36382 358 aa9.51□□□□□ -0.89
RNU6-943P-201ENST00000516960 NUTM2DQ5VT03 806 aaPredicted RBP9.51□□□□□ -0.89
RNU6-943P-201ENST00000516960 NUTM2AQ8IVF1 878 aaPredicted RBP9.51□□□□□ -0.89
RNU6-943P-201ENST00000516960 HSP90B1P14625 803 aaKnown RBP9.5□□□□□ -0.89
RNU6-943P-201ENST00000516960 CD46P15529 392 aa9.5□□□□□ -0.89
RNU6-943P-201ENST00000516960 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
RNU6-943P-201ENST00000516960 GJD4Q96KN9 370 aaPredicted RBP9.5□□□□□ -0.89
RNU6-943P-201ENST00000516960 ATG7O95352 703 aa9.49□□□□□ -0.89
RNU6-943P-201ENST00000516960 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
RNU6-943P-201ENST00000516960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.48□□□□□ -0.89
RNU6-943P-201ENST00000516960 TMEM88BA6NKF7 163 aa9.48□□□□□ -0.89
RNU6-943P-201ENST00000516960 IER5LQ5T953 404 aa9.48□□□□□ -0.89
RNU6-943P-201ENST00000516960 CHRDL2Q6WN34 429 aa9.48□□□□□ -0.89
RNU6-943P-201ENST00000516960 GNEQ9Y223 722 aaKnown RBP9.48□□□□□ -0.89
RNU6-943P-201ENST00000516960 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
RNU6-943P-201ENST00000516960 UNCXA6NJT0 531 aa9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 SLC34A2O95436 690 aa9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 PLCG2P16885 1265 aa9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 NDUFV2P19404 249 aa9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 VAC14Q08AM6 782 aa9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 RSPH4AQ5TD94 716 aa9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 PUS7Q96PZ0 661 aaKnown RBP9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 ALG2Q9H553 416 aa9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
RNU6-943P-201ENST00000516960 C6orf132Q5T0Z8 1188 aa9.46□□□□□ -0.9
RNU6-943P-201ENST00000516960 B4GALNT3Q6L9W6 998 aa9.46□□□□□ -0.9
RNU6-943P-201ENST00000516960 SULF1Q8IWU6 871 aa9.46□□□□□ -0.9
RNU6-943P-201ENST00000516960 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.9
RNU6-943P-201ENST00000516960 RBM47A0AV96 593 aaKnown RBP9.45□□□□□ -0.9
RNU6-943P-201ENST00000516960 ATN1P54259 1190 aaPredicted RBP9.45□□□□□ -0.9
RNU6-943P-201ENST00000516960 PRPF38BQ5VTL8 546 aaKnown RBP9.45□□□□□ -0.9
RNU6-943P-201ENST00000516960 CDK11BP21127 795 aaKnown RBP9.44□□□□□ -0.9
RNU6-943P-201ENST00000516960 JPH4Q96JJ6 628 aa9.44□□□□□ -0.9
RNU6-943P-201ENST00000516960 CDK11AQ9UQ88 783 aaPredicted RBP9.44□□□□□ -0.9
RNU6-943P-201ENST00000516960 RCCD1A6NED2 376 aa9.43□□□□□ -0.9
RNU6-943P-201ENST00000516960 GALR2O43603 387 aaPredicted RBP9.43□□□□□ -0.9
RNU6-943P-201ENST00000516960 DDX11L8A8MPP1 907 aa9.42□□□□□ -0.9
RNU6-943P-201ENST00000516960 PRSS12P56730 875 aa9.42□□□□□ -0.9
RNU6-943P-201ENST00000516960 UCN2Q96RP3 112 aa9.42□□□□□ -0.9
RNU6-943P-201ENST00000516960 ZBTB3Q9H5J0 574 aa9.42□□□□□ -0.9
RNU6-943P-201ENST00000516960 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
RNU6-943P-201ENST00000516960 SOX11P35716 441 aa9.41□□□□□ -0.9
RNU6-943P-201ENST00000516960 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
RNU6-943P-201ENST00000516960 HMX1Q9NP08 348 aaPredicted RBP9.41□□□□□ -0.9
RNU6-943P-201ENST00000516960 IGSF5Q9NSI5 407 aa9.41□□□□□ -0.9
RNU6-943P-201ENST00000516960 GPR37L1O60883 481 aa9.4□□□□□ -0.9
RNU6-943P-201ENST00000516960 CCER1Q8TC90 406 aaPredicted RBP9.4□□□□□ -0.9
RNU6-943P-201ENST00000516960 MAFBQ9Y5Q3 323 aaPredicted RBP9.4□□□□□ -0.9
RNU6-943P-201ENST00000516960 FOSBP53539 338 aa9.39□□□□□ -0.91
RNU6-943P-201ENST00000516960 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
RNU6-943P-201ENST00000516960 PRR7Q8TB68 274 aa9.39□□□□□ -0.91
RNU6-943P-201ENST00000516960 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
RNU6-943P-201ENST00000516960 ERCC3P19447 782 aa9.38□□□□□ -0.91
RNU6-943P-201ENST00000516960 ATMINO43313 823 aaPredicted RBP9.37□□□□□ -0.91
RNU6-943P-201ENST00000516960 SEMA3FQ13275 785 aa9.37□□□□□ -0.91
RNU6-943P-201ENST00000516960 ZDHHC16Q969W1 377 aa9.37□□□□□ -0.91
RNU6-943P-201ENST00000516960 EYA1Q99502 592 aa9.37□□□□□ -0.91
RNU6-943P-201ENST00000516960 KDM4AO75164 1064 aa9.36□□□□□ -0.91
RNU6-943P-201ENST00000516960 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
RNU6-943P-201ENST00000516960 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
RNU6-943P-201ENST00000516960 TXNDC2Q86VQ3 553 aa9.35□□□□□ -0.91
RNU6-943P-201ENST00000516960 MRRFQ96E11 262 aaKnown RBP9.35□□□□□ -0.91
RNU6-943P-201ENST00000516960 KIAA1522Q9P206 1035 aaPredicted RBP9.35□□□□□ -0.91
RNU6-943P-201ENST00000516960 FDX1P10109 184 aa9.34□□□□□ -0.91
RNU6-943P-201ENST00000516960 DNAJB2P25686 324 aa9.34□□□□□ -0.91
RNU6-943P-201ENST00000516960 HELBQ8NG08 1087 aaPredicted RBP9.34□□□□□ -0.91
RNU6-943P-201ENST00000516960 ATP9BO43861 1147 aa9.33□□□□□ -0.92
RNU6-943P-201ENST00000516960 USP46P62068 366 aa9.33□□□□□ -0.92
RNU6-943P-201ENST00000516960 ELOAQ14241 798 aaKnown RBP9.33□□□□□ -0.92
RNU6-943P-201ENST00000516960 ASTLQ6HA08 431 aaPredicted RBP9.33□□□□□ -0.92
RNU6-943P-201ENST00000516960 ZNF454Q8N9F8 522 aa9.33□□□□□ -0.92
RNU6-943P-201ENST00000516960 LRRN4Q8WUT4 740 aa9.33□□□□□ -0.92
RNU6-943P-201ENST00000516960 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
RNU6-943P-201ENST00000516960 RDH13Q8NBN7 331 aa9.32□□□□□ -0.92
RNU6-943P-201ENST00000516960 TSC1Q92574 1164 aa9.32□□□□□ -0.92
RNU6-943P-201ENST00000516960 KDM4FA0A1W2PPD8 638 aa9.31□□□□□ -0.92
RNU6-943P-201ENST00000516960 TMEM164Q5U3C3 297 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms