RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 PTGER2P43116 358 aa3.49□□□□□ -1.85
SCARNA16.3-201ENST00000516595 NEUROD2Q15784 382 aa3.49□□□□□ -1.85
SCARNA16.3-201ENST00000516595 MAP3K1Q13233 1512 aa3.49□□□□□ -1.85
SCARNA16.3-201ENST00000516595 NUP153P49790 1475 aaKnown RBP3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 PLB1Q6P1J6 1458 aa3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 PCF11O94913 1555 aaKnown RBP3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 LOC105371045A0A1W2PR82 267 aa3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 SNPHO15079 494 aa3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 NUDT7P0C024 238 aa3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 BARGINQ6ZT62 677 aa3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 KHSRPQ92945 711 aaKnown RBP eCLIP3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 AK7Q96M32 723 aa3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 EPAS1Q99814 870 aa3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 ANO8Q9HCE9 1232 aaPredicted RBP3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 PCDH10Q9P2E7 1040 aa3.48□□□□□ -1.85
SCARNA16.3-201ENST00000516595 FCHSD2O94868 740 aa3.47□□□□□ -1.85
SCARNA16.3-201ENST00000516595 PHF14O94880 888 aa3.47□□□□□ -1.85
SCARNA16.3-201ENST00000516595 TYW1BQ6NUM6 668 aa3.47□□□□□ -1.85
SCARNA16.3-201ENST00000516595 ZNF454Q8N9F8 522 aa3.47□□□□□ -1.85
SCARNA16.3-201ENST00000516595 EPRSP07814 1512 aaKnown RBP3.47□□□□□ -1.85
SCARNA16.3-201ENST00000516595 ATP10BO94823 1461 aa3.47□□□□□ -1.85
SCARNA16.3-201ENST00000516595 CFAP43Q8NDM7 1665 aa3.46□□□□□ -1.85
SCARNA16.3-201ENST00000516595 PCDHGA10Q9Y5H3 936 aa3.46□□□□□ -1.86
SCARNA16.3-201ENST00000516595 WDR7Q9Y4E6 1490 aa3.46□□□□□ -1.86
SCARNA16.3-201ENST00000516595 TIAM1Q13009 1591 aa3.46□□□□□ -1.86
SCARNA16.3-201ENST00000516595 MINK1Q8N4C8 1332 aaPredicted RBP3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 TROQ12816 1431 aaPredicted RBP3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 EHBP1L1Q8N3D4 1523 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ZCCHC11Q5TAX3 1644 aaKnown RBP3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 GNPATO15228 680 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 HOXB3P14651 431 aaPredicted RBP3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 HIC1Q14526 733 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 LCE2DQ5TA82 110 aaPredicted RBP3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 CYB5RLQ6IPT4 315 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 FBXW7Q969H0 707 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ZDHHC16Q969W1 377 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ZSWIM6Q9HCJ5 1215 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 LHX6Q9UPM6 363 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ABCC10Q5T3U5 1492 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 GLI2P10070 1586 aa3.45□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ASXL2Q76L83 1435 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 CDK13Q14004 1512 aaKnown RBP3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ARAP3Q8WWN8 1544 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 IRF6O14896 467 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 FECHP22830 423 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PRIM1P49642 420 aaKnown RBP3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 EN1Q05925 392 aaPredicted RBP3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PTGDRQ13258 359 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 TSR1Q2NL82 804 aaKnown RBP3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PPP4R3BQ5MIZ7 849 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 C6orf132Q5T0Z8 1188 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 GPR153Q6NV75 609 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 IL27Q8NEV9 243 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ATP1B4Q9UN42 357 aaPredicted RBP3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 CDK11AQ9UQ88 783 aaPredicted RBP3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 KIF14Q15058 1648 aa3.44□□□□□ -1.86
SCARNA16.3-201ENST00000516595 DIP2BQ9P265 1576 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 LRRC9Q6ZRR7 1453 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 TRIM66O15016 1216 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 RANGAP1P46060 587 aaPredicted RBP3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 FOSBP53539 338 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 BRPF1P55201 1214 aaPredicted RBP3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PDE4DQ08499 809 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 MAP2K5Q13163 448 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 TMEM132AQ24JP5 1023 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 FAM163AQ96GL9 167 aaPredicted RBP3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 KCNH8Q96L42 1107 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 CDHR5Q9HBB8 845 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 LRRIQ1Q96JM4 1722 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ABCA9Q8IUA7 1624 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 MAGI3Q5TCQ9 1506 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ERBB3P21860 1342 aa3.43□□□□□ -1.86
SCARNA16.3-201ENST00000516595 MTUS2Q5JR59 1369 aa3.42□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PSDA5PKW4 1024 aaPredicted RBP3.42□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PLEKHD1A6NEE1 506 aa3.42□□□□□ -1.86
SCARNA16.3-201ENST00000516595 HOXB1P14653 301 aaPredicted RBP3.42□□□□□ -1.86
SCARNA16.3-201ENST00000516595 TTLL12Q14166 644 aaPredicted RBP3.42□□□□□ -1.86
SCARNA16.3-201ENST00000516595 CERKQ8TCT0 537 aa3.42□□□□□ -1.86
SCARNA16.3-201ENST00000516595 CCDC102AQ96A19 550 aa3.42□□□□□ -1.86
SCARNA16.3-201ENST00000516595 ADAM33Q9BZ11 813 aa3.42□□□□□ -1.86
SCARNA16.3-201ENST00000516595 SUPT6HQ7KZ85 1726 aaKnown RBP3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 MAP3K4Q9Y6R4 1608 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PHLDB1Q86UU1 1377 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 KDM4FA0A1W2PPD8 638 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PTPREP23469 700 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 FAM161AQ3B820 660 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 KDM4CQ9H3R0 1056 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 GPBP1L1Q9HC44 474 aaPredicted RBP3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 NPDC1Q9NQX5 325 aaPredicted RBP3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 DAXXQ9UER7 740 aaPredicted RBP3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 GTF3C3Q9Y5Q9 886 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PLCH2O75038 1416 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 MIA2Q96PC5 1412 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 CFAP74Q9C0B2 1584 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 TTBK1Q5TCY1 1321 aaPredicted RBP3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 NCOA2Q15596 1464 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 TEX14Q8IWB6 1497 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 NEO1Q92859 1461 aa3.41□□□□□ -1.86
SCARNA16.3-201ENST00000516595 PREX2Q70Z35 1606 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms