RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 TGP01266 2768 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FBLL1A6NHQ2 334 aaKnown RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ST18O60284 1047 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 HNRNPA1P09651 372 aaKnown RBP eCLIP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LMO1P25800 156 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 COMPP49747 757 aaPredicted RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FXR2P51116 673 aaKnown RBP eCLIP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 TRA2BP62995 288 aaKnown RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 RING1Q06587 406 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NFATC3Q12968 1075 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 CSRP2Q16527 193 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRTAP19-4Q3LI73 84 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRTAP27-1Q3LI81 207 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 CRB2Q5IJ48 1285 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 C11orf87Q6NUJ2 197 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FBXO38Q6PIJ6 1188 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DBX2Q6ZNG2 339 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GGNQ86UU5 652 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZSCAN1Q8NBB4 408 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SPATA3Q8NHX4 192 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 STAG1Q8WVM7 1258 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FUBP1Q96AE4 644 aaKnown RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DHX36Q9H2U1 1008 aaKnown RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PRR13Q9NZ81 148 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 MYT1LQ9UL68 1186 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DNMT3AQ9Y6K1 912 aaPredicted RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FAT3Q8TDW7 4589 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 COL4A4P53420 1690 aaPredicted RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 TNCP24821 2201 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ARID1AO14497 2285 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF318Q5VUA4 2279 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 CACNA1GO43497 2377 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ACANP16112 2415 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 RIF1Q5UIP0 2472 aaKnown RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NCOR2Q9Y618 2525 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 VWFP04275 2813 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 BPTFQ12830 3046 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 COL6A3P12111 3177 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 BSNQ9UPA5 3926 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DNHD1Q96M86 4753 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PDZD2O15018 2839 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NBEAL2Q6ZNJ1 2754 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 COL6A5A8TX70 2615 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 A0A1W2PNU3 283 aaPredicted RBP-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SCO2A0A1W2PP80 73 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 TTLL8A6PVC2 850 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SUSD5O60279 629 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 POTEJP0CG39 1038 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 AZU1P20160 251 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 HOXD11P31277 338 aaPredicted RBP-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF76P36508 570 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRTAP10-10P60014 251 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DHX9Q08211 1270 aaKnown RBP-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZMYM1Q5SVZ6 1142 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LCE3EQ5T5B0 92 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GRASPQ7Z6J2 395 aaPredicted RBP-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NBPF11Q86T75 865 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 TRIM42Q8IWZ5 723 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 MICALL1Q8N3F8 863 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRT35Q92764 455 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SPOCK3Q9BQ16 436 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 BRINP2Q9C0B6 783 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SEMA6BQ9H3T3 888 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF768Q9H5H4 540 aaKnown RBP-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 WBP1LQ9NX94 342 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 TESQ9UGI8 421 aaKnown RBP-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KLF2Q9Y5W3 355 aaPredicted RBP-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FLNCQ14315 2725 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 BAHCC1Q9P281 2608 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 TP53BP1Q12888 1972 aaPredicted RBP-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ADAMTS20P59510 1910 aa-0.26□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NBEAL1Q6ZS30 2694 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SETXQ7Z333 2677 aaKnown RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 EPG5Q9HCE0 2579 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SORL1Q92673 2214 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 BIRC6Q9NR09 4857 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SENP3-EIF4A1A0A087X0R7 540 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 MSTNO14793 375 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 RTL8CO15255 209 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 AKAP8O43823 692 aaKnown RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ONECUT3O60422 494 aaPredicted RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF202O95125 648 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PROCP04070 461 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FURINP09958 794 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRT2P35908 639 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FOXK2Q01167 660 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GRIN2CQ14957 1233 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LAPTM4AQ15012 233 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRTAP19-8Q3LI54 63 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRTAP20-1Q3LI63 56 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FOXD4L6Q3SYB3 417 aaPredicted RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FOXD4L3Q6VB84 417 aaPredicted RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 USP51Q70EK9 711 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 CILP2Q8IUL8 1156 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF579Q8NAF0 562 aaKnown RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZBTB8BQ8NAP8 495 aaPredicted RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 IGFBPL1Q8WX77 278 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SORCS1Q8WY21 1168 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 WASF1Q92558 559 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZDHHC16Q969W1 377 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms