RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 DZIP1LQ8IYY4 767 aaKnown RBP12.87□□□□□ -0.35
SMG7-215ENST00000515829 HDGFL2Q7Z4V5 671 aaPredicted RBP12.86□□□□□ -0.35
SMG7-215ENST00000515829 GBP4Q96PP9 640 aa12.86□□□□□ -0.35
SMG7-215ENST00000515829 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
SMG7-215ENST00000515829 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
SMG7-215ENST00000515829 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
SMG7-215ENST00000515829 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
SMG7-215ENST00000515829 PTMAP06454 111 aaKnown RBP12.85□□□□□ -0.35
SMG7-215ENST00000515829 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
SMG7-215ENST00000515829 ANKRD45Q5TZF3 282 aa12.85□□□□□ -0.35
SMG7-215ENST00000515829 GPATCH8Q9UKJ3 1502 aaKnown RBP12.84□□□□□ -0.35
SMG7-215ENST00000515829 SYNJ2O15056 1496 aa12.84□□□□□ -0.35
SMG7-215ENST00000515829 LAMC3Q9Y6N6 1575 aa12.84□□□□□ -0.35
SMG7-215ENST00000515829 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
SMG7-215ENST00000515829 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
SMG7-215ENST00000515829 MLECQ14165 292 aa12.83□□□□□ -0.36
SMG7-215ENST00000515829 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
SMG7-215ENST00000515829 LNPKQ9C0E8 428 aa12.83□□□□□ -0.36
SMG7-215ENST00000515829 C22orf23Q9BZE7 217 aa12.82□□□□□ -0.36
SMG7-215ENST00000515829 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
SMG7-215ENST00000515829 TSR2Q969E8 191 aaKnown RBP12.82□□□□□ -0.36
SMG7-215ENST00000515829 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
SMG7-215ENST00000515829 TEX14Q8IWB6 1497 aa12.82□□□□□ -0.36
SMG7-215ENST00000515829 HDGFP51858 240 aaKnown RBP12.82□□□□□ -0.36
SMG7-215ENST00000515829 TERF2IPQ9NYB0 399 aa12.82□□□□□ -0.36
SMG7-215ENST00000515829 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
SMG7-215ENST00000515829 MAGI1Q96QZ7 1491 aaPredicted RBP12.82□□□□□ -0.36
SMG7-215ENST00000515829 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
SMG7-215ENST00000515829 RIPK4P57078 832 aa12.81□□□□□ -0.36
SMG7-215ENST00000515829 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
SMG7-215ENST00000515829 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
SMG7-215ENST00000515829 KDM6BO15054 1643 aa12.81□□□□□ -0.36
SMG7-215ENST00000515829 EVC2Q86UK5 1308 aa12.8□□□□□ -0.36
SMG7-215ENST00000515829 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
SMG7-215ENST00000515829 DNTTIP2Q5QJE6 756 aaKnown RBP12.8□□□□□ -0.36
SMG7-215ENST00000515829 PZPP20742 1482 aa12.8□□□□□ -0.36
SMG7-215ENST00000515829 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
SMG7-215ENST00000515829 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
SMG7-215ENST00000515829 WWC1Q8IX03 1113 aa12.8□□□□□ -0.36
SMG7-215ENST00000515829 MSNP26038 577 aaKnown RBP12.79□□□□□ -0.36
SMG7-215ENST00000515829 CHMP5Q9NZZ3 219 aa12.79□□□□□ -0.36
SMG7-215ENST00000515829 RNF123Q5XPI4 1314 aa12.79□□□□□ -0.36
SMG7-215ENST00000515829 RSPH6AQ9H0K4 717 aa12.79□□□□□ -0.36
SMG7-215ENST00000515829 SPATA31E1Q6ZUB1 1445 aa12.79□□□□□ -0.36
SMG7-215ENST00000515829 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
SMG7-215ENST00000515829 IGHDP01880 384 aa12.79□□□□□ -0.36
SMG7-215ENST00000515829 EXOSC9Q06265 439 aaKnown RBP12.79□□□□□ -0.36
SMG7-215ENST00000515829 FOXD4L5Q5VV16 416 aaPredicted RBP12.78□□□□□ -0.36
SMG7-215ENST00000515829 FOXD4L4Q8WXT5 416 aaPredicted RBP12.78□□□□□ -0.36
SMG7-215ENST00000515829 PARD3Q8TEW0 1356 aa12.78□□□□□ -0.36
SMG7-215ENST00000515829 PER1O15534 1290 aaPredicted RBP12.78□□□□□ -0.36
SMG7-215ENST00000515829 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.36
SMG7-215ENST00000515829 CCDC141Q6ZP82 1450 aa12.77□□□□□ -0.37
SMG7-215ENST00000515829 NOL8Q76FK4 1167 aaKnown RBP12.77□□□□□ -0.37
SMG7-215ENST00000515829 STAC3Q96MF2 364 aa12.77□□□□□ -0.37
SMG7-215ENST00000515829 TESK2Q96S53 571 aa12.76□□□□□ -0.37
SMG7-215ENST00000515829 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
SMG7-215ENST00000515829 ARID3AQ99856 593 aa12.76□□□□□ -0.37
SMG7-215ENST00000515829 LRPPRCP42704 1394 aaKnown RBP12.76□□□□□ -0.37
SMG7-215ENST00000515829 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
SMG7-215ENST00000515829 WDR62O43379 1518 aa12.75□□□□□ -0.37
SMG7-215ENST00000515829 VGFO15240 615 aaPredicted RBP12.75□□□□□ -0.37
SMG7-215ENST00000515829 HMOX1P09601 288 aa12.75□□□□□ -0.37
SMG7-215ENST00000515829 SLC4A10Q6U841 1118 aa12.75□□□□□ -0.37
SMG7-215ENST00000515829 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
SMG7-215ENST00000515829 NUTM2FA1L443 756 aa12.75□□□□□ -0.37
SMG7-215ENST00000515829 DDX49Q9Y6V7 483 aaKnown RBP12.75□□□□□ -0.37
SMG7-215ENST00000515829 PLEKHH2Q8IVE3 1493 aa12.75□□□□□ -0.37
SMG7-215ENST00000515829 TRAK2O60296 914 aa12.74□□□□□ -0.37
SMG7-215ENST00000515829 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
SMG7-215ENST00000515829 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
SMG7-215ENST00000515829 PLEKHH1Q9ULM0 1364 aa12.73□□□□□ -0.37
SMG7-215ENST00000515829 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
SMG7-215ENST00000515829 PRAG1Q86YV5 1406 aa12.73□□□□□ -0.37
SMG7-215ENST00000515829 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
SMG7-215ENST00000515829 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
SMG7-215ENST00000515829 RAPGEF6Q8TEU7 1601 aa12.72□□□□□ -0.37
SMG7-215ENST00000515829 SAMD9Q5K651 1589 aa12.72□□□□□ -0.37
SMG7-215ENST00000515829 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
SMG7-215ENST00000515829 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
SMG7-215ENST00000515829 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
SMG7-215ENST00000515829 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
SMG7-215ENST00000515829 FOXD4L6Q3SYB3 417 aaPredicted RBP12.71□□□□□ -0.37
SMG7-215ENST00000515829 FOXD4L3Q6VB84 417 aaPredicted RBP12.71□□□□□ -0.37
SMG7-215ENST00000515829 KIF14Q15058 1648 aa12.71□□□□□ -0.37
SMG7-215ENST00000515829 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.38
SMG7-215ENST00000515829 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.38
SMG7-215ENST00000515829 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
SMG7-215ENST00000515829 AAMPQ13685 434 aa12.7□□□□□ -0.38
SMG7-215ENST00000515829 DNMT1P26358 1616 aaKnown RBP12.7□□□□□ -0.38
SMG7-215ENST00000515829 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
SMG7-215ENST00000515829 WDR63Q8IWG1 891 aa12.7□□□□□ -0.38
SMG7-215ENST00000515829 NSD3Q9BZ95 1437 aa12.69□□□□□ -0.38
SMG7-215ENST00000515829 A0A0G2JS52 829 aa12.69□□□□□ -0.38
SMG7-215ENST00000515829 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
SMG7-215ENST00000515829 PTMSP20962 102 aa12.69□□□□□ -0.38
SMG7-215ENST00000515829 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
SMG7-215ENST00000515829 KIF16BQ96L93 1317 aa12.69□□□□□ -0.38
SMG7-215ENST00000515829 MCCP23508 829 aa12.69□□□□□ -0.38
SMG7-215ENST00000515829 ATP10BO94823 1461 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms