RNA–Protein interactions for RNA: ENST00000515707.1

ABCC3-217, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3 BASIC

Gene ABCC3, Length 656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-217ENST00000515707 KIF1BO60333 1816 aa30.27■■■□□ 2.44
ABCC3-217ENST00000515707 LRRC7Q96NW7 1537 aa30.26■■■□□ 2.43
ABCC3-217ENST00000515707 SLC4A1APQ9BWU0 796 aaKnown RBP30.24■■■□□ 2.43
ABCC3-217ENST00000515707 NWD1Q149M9 1564 aa30.24■■■□□ 2.43
ABCC3-217ENST00000515707 PPP1R15AO75807 674 aaPredicted RBP30.23■■■□□ 2.43
ABCC3-217ENST00000515707 HDGFP51858 240 aaKnown RBP30.22■■■□□ 2.43
ABCC3-217ENST00000515707 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.22■■■□□ 2.43
ABCC3-217ENST00000515707 DIP2AQ14689 1571 aa30.22■■■□□ 2.43
ABCC3-217ENST00000515707 SETD5Q9C0A6 1442 aa30.22■■■□□ 2.43
ABCC3-217ENST00000515707 XIRP1Q702N8 1843 aaKnown RBP30.2■■■□□ 2.43
ABCC3-217ENST00000515707 SLC26A8Q96RN1 970 aa30.19■■■□□ 2.42
ABCC3-217ENST00000515707 UBAP1LF5GYI3 381 aa30.18■■■□□ 2.42
ABCC3-217ENST00000515707 NKTRP30414 1462 aaKnown RBP30.17■■■□□ 2.42
ABCC3-217ENST00000515707 NEXMIFQ5QGS0 1516 aa30.17■■■□□ 2.42
ABCC3-217ENST00000515707 CHD2O14647 1828 aaKnown RBP30.16■■■□□ 2.42
ABCC3-217ENST00000515707 ACIN1Q9UKV3 1341 aaKnown RBP30.16■■■□□ 2.42
ABCC3-217ENST00000515707 BCANQ96GW7 911 aa30.15■■■□□ 2.42
ABCC3-217ENST00000515707 ALKQ9UM73 1620 aa30.14■■■□□ 2.41
ABCC3-217ENST00000515707 ADAMTS13Q76LX8 1427 aa30.13■■■□□ 2.41
ABCC3-217ENST00000515707 SETBP1Q9Y6X0 1596 aa30.13■■■□□ 2.41
ABCC3-217ENST00000515707 NRXN3Q9Y4C0 1643 aa30.13■■■□□ 2.41
ABCC3-217ENST00000515707 RAB3GAP2Q9H2M9 1393 aa30.12■■■□□ 2.41
ABCC3-217ENST00000515707 NUTM2DQ5VT03 806 aaPredicted RBP30.11■■■□□ 2.41
ABCC3-217ENST00000515707 KCNA6P17658 529 aa30.1■■■□□ 2.41
ABCC3-217ENST00000515707 SENP3Q9H4L4 574 aaPredicted RBP30.1■■■□□ 2.41
ABCC3-217ENST00000515707 ZNF326Q5BKZ1 582 aaKnown RBP30.09■■■□□ 2.41
ABCC3-217ENST00000515707 MPHOSPH9Q99550 1183 aa30.09■■■□□ 2.41
ABCC3-217ENST00000515707 TOM1O60784 492 aa30.07■■■□□ 2.4
ABCC3-217ENST00000515707 FOXD1Q16676 465 aa30.07■■■□□ 2.4
ABCC3-217ENST00000515707 PPLO60437 1756 aa30.06■■■□□ 2.4
ABCC3-217ENST00000515707 TBX22Q9Y458 520 aa30.06■■■□□ 2.4
ABCC3-217ENST00000515707 CCDC144AA2RUR9 1427 aa30.05■■■□□ 2.4
ABCC3-217ENST00000515707 PIK3R4Q99570 1358 aa30.04■■■□□ 2.4
ABCC3-217ENST00000515707 TMEM94Q12767 1356 aa30.03■■■□□ 2.4
ABCC3-217ENST00000515707 XRN1Q8IZH2 1706 aaKnown RBP29.99■■■□□ 2.39
ABCC3-217ENST00000515707 IFT172Q9UG01 1749 aa29.98■■■□□ 2.39
ABCC3-217ENST00000515707 SCAF1Q9H7N4 1312 aaKnown RBP29.97■■■□□ 2.39
ABCC3-217ENST00000515707 PIP4K2BP78356 416 aa29.97■■■□□ 2.39
ABCC3-217ENST00000515707 SETD1AO15047 1707 aaKnown RBP29.96■■■□□ 2.39
ABCC3-217ENST00000515707 PROSER2Q86WR7 435 aaPredicted RBP29.96■■■□□ 2.39
ABCC3-217ENST00000515707 SPATA31E1Q6ZUB1 1445 aa29.96■■■□□ 2.39
ABCC3-217ENST00000515707 RPGRIP1LQ68CZ1 1315 aa29.95■■■□□ 2.38
ABCC3-217ENST00000515707 PTPRUQ92729 1446 aa29.93■■■□□ 2.38
ABCC3-217ENST00000515707 VGFO15240 615 aaPredicted RBP29.89■■■□□ 2.38
ABCC3-217ENST00000515707 RBM33Q96EV2 1170 aaKnown RBP29.89■■■□□ 2.38
ABCC3-217ENST00000515707 NCOA3Q9Y6Q9 1424 aa29.88■■■□□ 2.37
ABCC3-217ENST00000515707 HRCP23327 699 aa29.88■■■□□ 2.37
ABCC3-217ENST00000515707 METP08581 1390 aa29.88■■■□□ 2.37
ABCC3-217ENST00000515707 MSH6P52701 1360 aa29.88■■■□□ 2.37
ABCC3-217ENST00000515707 AMOTL2Q9Y2J4 779 aa29.84■■■□□ 2.37
ABCC3-217ENST00000515707 HSPA1LP34931 641 aa29.83■■■□□ 2.37
ABCC3-217ENST00000515707 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.82■■■□□ 2.36
ABCC3-217ENST00000515707 ANKRD30BQ9BXX2 1392 aa29.82■■■□□ 2.36
ABCC3-217ENST00000515707 ROBO1Q9Y6N7 1651 aa29.82■■■□□ 2.36
ABCC3-217ENST00000515707 RGL3Q3MIN7 710 aa29.78■■■□□ 2.36
ABCC3-217ENST00000515707 FAM135BQ49AJ0 1406 aa29.78■■■□□ 2.36
ABCC3-217ENST00000515707 PRAG1Q86YV5 1406 aa29.78■■■□□ 2.36
ABCC3-217ENST00000515707 PTCH1Q13635 1447 aa29.76■■■□□ 2.35
ABCC3-217ENST00000515707 NALCNQ8IZF0 1738 aa29.76■■■□□ 2.35
ABCC3-217ENST00000515707 MYOM2P54296 1465 aa29.75■■■□□ 2.35
ABCC3-217ENST00000515707 PIK3C2GO75747 1445 aa29.75■■■□□ 2.35
ABCC3-217ENST00000515707 C14orf37Q86TY3 774 aa29.75■■■□□ 2.35
ABCC3-217ENST00000515707 ADGRF5Q8IZF2 1346 aa29.74■■■□□ 2.35
ABCC3-217ENST00000515707 DCCP43146 1447 aa29.74■■■□□ 2.35
ABCC3-217ENST00000515707 LAMC1P11047 1609 aa29.73■■■□□ 2.35
ABCC3-217ENST00000515707 NRXN1Q9ULB1 1477 aa29.7■■■□□ 2.35
ABCC3-217ENST00000515707 C19orf44Q9H6X5 657 aa29.7■■■□□ 2.35
ABCC3-217ENST00000515707 ASXL1Q8IXJ9 1541 aa29.7■■■□□ 2.34
ABCC3-217ENST00000515707 ADGRL3Q9HAR2 1447 aa29.7■■■□□ 2.34
ABCC3-217ENST00000515707 KNDC1Q76NI1 1749 aa29.68■■■□□ 2.34
ABCC3-217ENST00000515707 SLAIN2Q9P270 581 aa29.68■■■□□ 2.34
ABCC3-217ENST00000515707 CADPS2Q86UW7 1296 aa29.67■■■□□ 2.34
ABCC3-217ENST00000515707 ROBO2Q9HCK4 1378 aa29.65■■■□□ 2.34
ABCC3-217ENST00000515707 MED1Q15648 1581 aaPredicted RBP29.65■■■□□ 2.34
ABCC3-217ENST00000515707 ATF3P18847 181 aa29.64■■■□□ 2.34
ABCC3-217ENST00000515707 PHLPP1O60346 1717 aa29.64■■■□□ 2.34
ABCC3-217ENST00000515707 DISP3Q9P2K9 1392 aa29.63■■■□□ 2.33
ABCC3-217ENST00000515707 TECPR2O15040 1411 aa29.62■■■□□ 2.33
ABCC3-217ENST00000515707 MST1RQ04912 1400 aa29.59■■■□□ 2.33
ABCC3-217ENST00000515707 LRPPRCP42704 1394 aaKnown RBP29.58■■■□□ 2.33
ABCC3-217ENST00000515707 AHDC1Q5TGY3 1603 aaPredicted RBP29.58■■■□□ 2.33
ABCC3-217ENST00000515707 COL16A1Q07092 1604 aaPredicted RBP29.57■■■□□ 2.32
ABCC3-217ENST00000515707 CDC42BPGQ6DT37 1551 aa29.55■■■□□ 2.32
ABCC3-217ENST00000515707 YTHDC2Q9H6S0 1430 aaKnown RBP29.54■■■□□ 2.32
ABCC3-217ENST00000515707 ABCC11Q96J66 1382 aa29.52■■■□□ 2.32
ABCC3-217ENST00000515707 C14orf93Q9H972 538 aaKnown RBP29.52■■■□□ 2.32
ABCC3-217ENST00000515707 NHSL1Q5SYE7 1610 aa29.51■■■□□ 2.31
ABCC3-217ENST00000515707 TMEM132EQ6IEE7 984 aa29.5■■■□□ 2.31
ABCC3-217ENST00000515707 DHX57Q6P158 1386 aaKnown RBP29.49■■■□□ 2.31
ABCC3-217ENST00000515707 ADGRB1O14514 1584 aa29.48■■■□□ 2.31
ABCC3-217ENST00000515707 BRINP3Q76B58 766 aa29.48■■■□□ 2.31
ABCC3-217ENST00000515707 STK26Q9P289 416 aa29.48■■■□□ 2.31
ABCC3-217ENST00000515707 CFAP70Q5T0N1 1121 aa29.47■■■□□ 2.31
ABCC3-217ENST00000515707 DCAF11Q8TEB1 546 aa29.47■■■□□ 2.31
ABCC3-217ENST00000515707 STAC3Q96MF2 364 aa29.46■■■□□ 2.31
ABCC3-217ENST00000515707 C1orf167Q5SNV9 1468 aa29.45■■■□□ 2.31
ABCC3-217ENST00000515707 DLC1Q96QB1 1528 aa29.44■■■□□ 2.3
ABCC3-217ENST00000515707 SHPRHQ149N8 1683 aa29.43■■■□□ 2.3
ABCC3-217ENST00000515707 PLEKHH1Q9ULM0 1364 aa29.41■■■□□ 2.3
ABCC3-217ENST00000515707 KDM2AQ9Y2K7 1162 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms