RNA–Protein interactions for RNA: ENST00000515155.1

FAM13A-221, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 4

Gene FAM13A, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-221ENST00000515155 PRAG1Q86YV5 1406 aa13.33□□□□□ -0.28
FAM13A-221ENST00000515155 ARHGAP23Q9P227 1491 aa13.32□□□□□ -0.28
FAM13A-221ENST00000515155 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
FAM13A-221ENST00000515155 PLPPR3Q6T4P5 718 aa13.32□□□□□ -0.28
FAM13A-221ENST00000515155 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
FAM13A-221ENST00000515155 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
FAM13A-221ENST00000515155 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
FAM13A-221ENST00000515155 RIMS2Q9UQ26 1411 aa13.31□□□□□ -0.28
FAM13A-221ENST00000515155 SLIT1O75093 1534 aa13.31□□□□□ -0.28
FAM13A-221ENST00000515155 CEP170BQ9Y4F5 1589 aaPredicted RBP13.31□□□□□ -0.28
FAM13A-221ENST00000515155 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
FAM13A-221ENST00000515155 UBR1Q8IWV7 1749 aa13.3□□□□□ -0.28
FAM13A-221ENST00000515155 ZNF142P52746 1687 aaPredicted RBP13.29□□□□□ -0.28
FAM13A-221ENST00000515155 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
FAM13A-221ENST00000515155 C14orf93Q9H972 538 aaKnown RBP13.28□□□□□ -0.28
FAM13A-221ENST00000515155 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
FAM13A-221ENST00000515155 GPRASP1Q5JY77 1395 aa13.28□□□□□ -0.28
FAM13A-221ENST00000515155 RALGAPBQ86X10 1494 aa13.27□□□□□ -0.29
FAM13A-221ENST00000515155 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
FAM13A-221ENST00000515155 PPLO60437 1756 aa13.26□□□□□ -0.29
FAM13A-221ENST00000515155 LTKP29376 864 aa13.26□□□□□ -0.29
FAM13A-221ENST00000515155 TXNDC2Q86VQ3 553 aa13.26□□□□□ -0.29
FAM13A-221ENST00000515155 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
FAM13A-221ENST00000515155 ANKLE2Q86XL3 938 aa13.25□□□□□ -0.29
FAM13A-221ENST00000515155 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
FAM13A-221ENST00000515155 ROCK2O75116 1388 aaKnown RBP13.22□□□□□ -0.29
FAM13A-221ENST00000515155 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
FAM13A-221ENST00000515155 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
FAM13A-221ENST00000515155 SETBP1Q9Y6X0 1596 aa13.22□□□□□ -0.29
FAM13A-221ENST00000515155 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
FAM13A-221ENST00000515155 LMTK3Q96Q04 1460 aa13.22□□□□□ -0.29
FAM13A-221ENST00000515155 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.29
FAM13A-221ENST00000515155 TBX22Q9Y458 520 aa13.21□□□□□ -0.29
FAM13A-221ENST00000515155 KIAA1210Q9ULL0 1709 aa13.21□□□□□ -0.3
FAM13A-221ENST00000515155 MED14O60244 1454 aa13.21□□□□□ -0.3
FAM13A-221ENST00000515155 CARD11Q9BXL7 1154 aa13.2□□□□□ -0.3
FAM13A-221ENST00000515155 TRPM1Q7Z4N2 1603 aa13.2□□□□□ -0.3
FAM13A-221ENST00000515155 ADAMTS13Q76LX8 1427 aa13.19□□□□□ -0.3
FAM13A-221ENST00000515155 LAMC1P11047 1609 aa13.18□□□□□ -0.3
FAM13A-221ENST00000515155 EIF4G2P78344 907 aaKnown RBP eCLIP13.18□□□□□ -0.3
FAM13A-221ENST00000515155 ADGRB1O14514 1584 aa13.18□□□□□ -0.3
FAM13A-221ENST00000515155 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
FAM13A-221ENST00000515155 PIK3R4Q99570 1358 aa13.17□□□□□ -0.3
FAM13A-221ENST00000515155 USP47Q96K76 1375 aa13.16□□□□□ -0.3
FAM13A-221ENST00000515155 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
FAM13A-221ENST00000515155 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
FAM13A-221ENST00000515155 NPHP4O75161 1426 aaPredicted RBP13.15□□□□□ -0.3
FAM13A-221ENST00000515155 SIRT1Q96EB6 747 aa13.15□□□□□ -0.3
FAM13A-221ENST00000515155 LRPPRCP42704 1394 aaKnown RBP13.15□□□□□ -0.3
FAM13A-221ENST00000515155 ABCC11Q96J66 1382 aa13.15□□□□□ -0.3
FAM13A-221ENST00000515155 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
FAM13A-221ENST00000515155 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
FAM13A-221ENST00000515155 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
FAM13A-221ENST00000515155 METP08581 1390 aa13.14□□□□□ -0.31
FAM13A-221ENST00000515155 EIF3AQ14152 1382 aaKnown RBP13.13□□□□□ -0.31
FAM13A-221ENST00000515155 HSPA5P11021 654 aaKnown RBP13.13□□□□□ -0.31
FAM13A-221ENST00000515155 HSPA2P54652 639 aa13.13□□□□□ -0.31
FAM13A-221ENST00000515155 BCANQ96GW7 911 aa13.13□□□□□ -0.31
FAM13A-221ENST00000515155 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
FAM13A-221ENST00000515155 TECPR2O15040 1411 aa13.13□□□□□ -0.31
FAM13A-221ENST00000515155 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
FAM13A-221ENST00000515155 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
FAM13A-221ENST00000515155 SETD1AO15047 1707 aaKnown RBP13.1□□□□□ -0.31
FAM13A-221ENST00000515155 SBNO2Q9Y2G9 1366 aa13.1□□□□□ -0.31
FAM13A-221ENST00000515155 DLC1Q96QB1 1528 aa13.1□□□□□ -0.31
FAM13A-221ENST00000515155 ST20-MTHFSA0A0A6YYL1 179 aa13.1□□□□□ -0.31
FAM13A-221ENST00000515155 IQGAP1P46940 1657 aa13.09□□□□□ -0.31
FAM13A-221ENST00000515155 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
FAM13A-221ENST00000515155 FAM135BQ49AJ0 1406 aa13.09□□□□□ -0.31
FAM13A-221ENST00000515155 TESK2Q96S53 571 aa13.09□□□□□ -0.31
FAM13A-221ENST00000515155 TRAK1Q9UPV9 953 aa13.09□□□□□ -0.31
FAM13A-221ENST00000515155 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
FAM13A-221ENST00000515155 PTPRUQ92729 1446 aa13.08□□□□□ -0.32
FAM13A-221ENST00000515155 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
FAM13A-221ENST00000515155 POLR1AO95602 1720 aaPredicted RBP13.08□□□□□ -0.32
FAM13A-221ENST00000515155 PTCH1Q13635 1447 aa13.07□□□□□ -0.32
FAM13A-221ENST00000515155 KCNA6P17658 529 aa13.07□□□□□ -0.32
FAM13A-221ENST00000515155 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
FAM13A-221ENST00000515155 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
FAM13A-221ENST00000515155 STK26Q9P289 416 aa13.06□□□□□ -0.32
FAM13A-221ENST00000515155 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
FAM13A-221ENST00000515155 CPS1P31327 1500 aa13.04□□□□□ -0.32
FAM13A-221ENST00000515155 PRAM1Q96QH2 718 aa13.04□□□□□ -0.32
FAM13A-221ENST00000515155 ROBO2Q9HCK4 1378 aa13.04□□□□□ -0.32
FAM13A-221ENST00000515155 STRCQ7RTU9 1775 aa13.04□□□□□ -0.32
FAM13A-221ENST00000515155 KNDC1Q76NI1 1749 aa13.03□□□□□ -0.32
FAM13A-221ENST00000515155 TMF1P82094 1093 aa13.03□□□□□ -0.32
FAM13A-221ENST00000515155 CDCA8Q53HL2 280 aa13.03□□□□□ -0.32
FAM13A-221ENST00000515155 AEBP2Q6ZN18 517 aaPredicted RBP13.03□□□□□ -0.32
FAM13A-221ENST00000515155 POGKQ9P215 609 aa13.03□□□□□ -0.32
FAM13A-221ENST00000515155 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.33
FAM13A-221ENST00000515155 NWD1Q149M9 1564 aa13.02□□□□□ -0.33
FAM13A-221ENST00000515155 XRN1Q8IZH2 1706 aaKnown RBP13.02□□□□□ -0.33
FAM13A-221ENST00000515155 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
FAM13A-221ENST00000515155 WAPLQ7Z5K2 1190 aa13.01□□□□□ -0.33
FAM13A-221ENST00000515155 NCOA3Q9Y6Q9 1424 aa13.01□□□□□ -0.33
FAM13A-221ENST00000515155 NKTRP30414 1462 aaKnown RBP13.01□□□□□ -0.33
FAM13A-221ENST00000515155 ARHGEF28Q8N1W1 1705 aaKnown RBP13□□□□□ -0.33
FAM13A-221ENST00000515155 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
FAM13A-221ENST00000515155 CCDC7Q96M83 1385 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms