RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 PLEKHG1Q9ULL1 1385 aa34.67■■■■□ 3.14
CLDND1-230ENST00000514537 TRIM52Q96A61 297 aa34.67■■■■□ 3.14
CLDND1-230ENST00000514537 PPP1R15AO75807 674 aaPredicted RBP34.66■■■■□ 3.14
CLDND1-230ENST00000514537 KCNA6P17658 529 aa34.66■■■■□ 3.14
CLDND1-230ENST00000514537 BCANQ96GW7 911 aa34.66■■■■□ 3.14
CLDND1-230ENST00000514537 MYO5BQ9ULV0 1848 aa34.65■■■■□ 3.14
CLDND1-230ENST00000514537 PIP4K2BP78356 416 aa34.61■■■■□ 3.13
CLDND1-230ENST00000514537 NUTM2DQ5VT03 806 aaPredicted RBP34.6■■■■□ 3.13
CLDND1-230ENST00000514537 SENP3Q9H4L4 574 aaPredicted RBP34.6■■■■□ 3.13
CLDND1-230ENST00000514537 SPHKAPQ2M3C7 1700 aa34.58■■■■□ 3.13
CLDND1-230ENST00000514537 SCAF1Q9H7N4 1312 aaKnown RBP34.57■■■■□ 3.13
CLDND1-230ENST00000514537 SLC4A1APQ9BWU0 796 aaKnown RBP34.57■■■■□ 3.12
CLDND1-230ENST00000514537 TBX22Q9Y458 520 aa34.56■■■■□ 3.12
CLDND1-230ENST00000514537 ALKQ9UM73 1620 aa34.55■■■■□ 3.12
CLDND1-230ENST00000514537 TRPM2O94759 1503 aa34.52■■■■□ 3.12
CLDND1-230ENST00000514537 TMEM94Q12767 1356 aa34.51■■■■□ 3.12
CLDND1-230ENST00000514537 PROSER2Q86WR7 435 aaPredicted RBP34.5■■■■□ 3.11
CLDND1-230ENST00000514537 ADAMTS13Q76LX8 1427 aa34.49■■■■□ 3.11
CLDND1-230ENST00000514537 ZNF326Q5BKZ1 582 aaKnown RBP34.49■■■■□ 3.11
CLDND1-230ENST00000514537 HSPA1LP34931 641 aa34.48■■■■□ 3.11
CLDND1-230ENST00000514537 NWD1Q149M9 1564 aa34.47■■■■□ 3.11
CLDND1-230ENST00000514537 NKTRP30414 1462 aaKnown RBP34.46■■■■□ 3.11
CLDND1-230ENST00000514537 CLTCL1P53675 1640 aa34.46■■■■□ 3.11
CLDND1-230ENST00000514537 RBM33Q96EV2 1170 aaKnown RBP34.44■■■■□ 3.1
CLDND1-230ENST00000514537 XIRP1Q702N8 1843 aaKnown RBP34.43■■■■□ 3.1
CLDND1-230ENST00000514537 PIK3R4Q99570 1358 aa34.41■■■■□ 3.1
CLDND1-230ENST00000514537 MPHOSPH9Q99550 1183 aa34.4■■■■□ 3.1
CLDND1-230ENST00000514537 DIP2AQ14689 1571 aa34.4■■■■□ 3.1
CLDND1-230ENST00000514537 FOXD1Q16676 465 aa34.39■■■■□ 3.1
CLDND1-230ENST00000514537 SETD5Q9C0A6 1442 aa34.38■■■■□ 3.09
CLDND1-230ENST00000514537 CHD2O14647 1828 aaKnown RBP34.37■■■■□ 3.09
CLDND1-230ENST00000514537 ACIN1Q9UKV3 1341 aaKnown RBP34.37■■■■□ 3.09
CLDND1-230ENST00000514537 DISP3Q9P2K9 1392 aa34.34■■■■□ 3.09
CLDND1-230ENST00000514537 NEXMIFQ5QGS0 1516 aa34.33■■■■□ 3.09
CLDND1-230ENST00000514537 SETBP1Q9Y6X0 1596 aa34.32■■■■□ 3.08
CLDND1-230ENST00000514537 AMOTL2Q9Y2J4 779 aa34.31■■■■□ 3.08
CLDND1-230ENST00000514537 KIF1BO60333 1816 aa34.3■■■■□ 3.08
CLDND1-230ENST00000514537 PTPRUQ92729 1446 aa34.3■■■■□ 3.08
CLDND1-230ENST00000514537 NCOA3Q9Y6Q9 1424 aa34.3■■■■□ 3.08
CLDND1-230ENST00000514537 RPGRIP1LQ68CZ1 1315 aa34.3■■■■□ 3.08
CLDND1-230ENST00000514537 MSH6P52701 1360 aa34.29■■■■□ 3.08
CLDND1-230ENST00000514537 NRXN3Q9Y4C0 1643 aa34.28■■■■□ 3.08
CLDND1-230ENST00000514537 FAM135BQ49AJ0 1406 aa34.28■■■■□ 3.08
CLDND1-230ENST00000514537 VGFO15240 615 aaPredicted RBP34.27■■■■□ 3.08
CLDND1-230ENST00000514537 METP08581 1390 aa34.24■■■■□ 3.07
CLDND1-230ENST00000514537 RAB3GAP2Q9H2M9 1393 aa34.23■■■■□ 3.07
CLDND1-230ENST00000514537 CCDC144AA2RUR9 1427 aa34.23■■■■□ 3.07
CLDND1-230ENST00000514537 SLAIN2Q9P270 581 aa34.2■■■■□ 3.07
CLDND1-230ENST00000514537 C14orf37Q86TY3 774 aa34.19■■■■□ 3.06
CLDND1-230ENST00000514537 C19orf44Q9H6X5 657 aa34.18■■■■□ 3.06
CLDND1-230ENST00000514537 SPATA31E1Q6ZUB1 1445 aa34.14■■■■□ 3.06
CLDND1-230ENST00000514537 RGL3Q3MIN7 710 aa34.13■■■■□ 3.05
CLDND1-230ENST00000514537 CADPS2Q86UW7 1296 aa34.12■■■■□ 3.05
CLDND1-230ENST00000514537 XRN1Q8IZH2 1706 aaKnown RBP34.12■■■■□ 3.05
CLDND1-230ENST00000514537 HRCP23327 699 aa34.11■■■■□ 3.05
CLDND1-230ENST00000514537 ATF3P18847 181 aa34.1■■■■□ 3.05
CLDND1-230ENST00000514537 ILDR2Q71H61 639 aa34.09■■■■□ 3.05
CLDND1-230ENST00000514537 ROBO1Q9Y6N7 1651 aa34.08■■■■□ 3.05
CLDND1-230ENST00000514537 PPLO60437 1756 aa34.07■■■■□ 3.04
CLDND1-230ENST00000514537 ADGRF5Q8IZF2 1346 aa34.06■■■■□ 3.04
CLDND1-230ENST00000514537 ANKRD30BQ9BXX2 1392 aa34.05■■■■□ 3.04
CLDND1-230ENST00000514537 MED1Q15648 1581 aaPredicted RBP34.04■■■■□ 3.04
CLDND1-230ENST00000514537 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.04■■■■□ 3.04
CLDND1-230ENST00000514537 DCCP43146 1447 aa34.01■■■■□ 3.03
CLDND1-230ENST00000514537 SETD1AO15047 1707 aaKnown RBP33.99■■■■□ 3.03
CLDND1-230ENST00000514537 PTCH1Q13635 1447 aa33.97■■■■□ 3.03
CLDND1-230ENST00000514537 PRAG1Q86YV5 1406 aa33.96■■■■□ 3.03
CLDND1-230ENST00000514537 ROBO2Q9HCK4 1378 aa33.96■■■■□ 3.03
CLDND1-230ENST00000514537 ADGRL3Q9HAR2 1447 aa33.96■■■■□ 3.03
CLDND1-230ENST00000514537 BRINP3Q76B58 766 aa33.91■■■■□ 3.02
CLDND1-230ENST00000514537 IFT172Q9UG01 1749 aa33.9■■■■□ 3.02
CLDND1-230ENST00000514537 PIK3C2GO75747 1445 aa33.9■■■■□ 3.02
CLDND1-230ENST00000514537 MST1RQ04912 1400 aa33.89■■■■□ 3.02
CLDND1-230ENST00000514537 PHF23Q9BUL5 403 aaPredicted RBP33.87■■■■□ 3.01
CLDND1-230ENST00000514537 PHLPP1O60346 1717 aa33.84■■■■□ 3.01
CLDND1-230ENST00000514537 C14orf93Q9H972 538 aaKnown RBP33.84■■■■□ 3.01
CLDND1-230ENST00000514537 LRPPRCP42704 1394 aaKnown RBP33.84■■■■□ 3.01
CLDND1-230ENST00000514537 JCADQ9P266 1359 aa33.84■■■■□ 3.01
CLDND1-230ENST00000514537 NRXN1Q9ULB1 1477 aa33.83■■■■□ 3.01
CLDND1-230ENST00000514537 TMEM132EQ6IEE7 984 aa33.83■■■■□ 3.01
CLDND1-230ENST00000514537 STK26Q9P289 416 aa33.82■■■■□ 3
CLDND1-230ENST00000514537 MYOM2P54296 1465 aa33.82■■■■□ 3
CLDND1-230ENST00000514537 NALCNQ8IZF0 1738 aa33.82■■■■□ 3
CLDND1-230ENST00000514537 AHDC1Q5TGY3 1603 aaPredicted RBP33.81■■■■□ 3
CLDND1-230ENST00000514537 ABCC11Q96J66 1382 aa33.81■■■■□ 3
CLDND1-230ENST00000514537 TECPR2O15040 1411 aa33.8■■■■□ 3
CLDND1-230ENST00000514537 COL16A1Q07092 1604 aaPredicted RBP33.8■■■■□ 3
CLDND1-230ENST00000514537 SOCS7O14512 581 aa33.78■■■■□ 3
CLDND1-230ENST00000514537 ASXL1Q8IXJ9 1541 aa33.78■■■■□ 3
CLDND1-230ENST00000514537 CFAP70Q5T0N1 1121 aa33.77■■■■□ 3
CLDND1-230ENST00000514537 C1orf167Q5SNV9 1468 aa33.76■■■□□ 2.99
CLDND1-230ENST00000514537 WAPLQ7Z5K2 1190 aa33.75■■■□□ 2.99
CLDND1-230ENST00000514537 YTHDC2Q9H6S0 1430 aaKnown RBP33.74■■■□□ 2.99
CLDND1-230ENST00000514537 RGS17Q9UGC6 210 aaPredicted RBP33.74■■■□□ 2.99
CLDND1-230ENST00000514537 SIRT1Q96EB6 747 aa33.72■■■□□ 2.99
CLDND1-230ENST00000514537 DCAF11Q8TEB1 546 aa33.7■■■□□ 2.99
CLDND1-230ENST00000514537 STAC3Q96MF2 364 aa33.69■■■□□ 2.98
CLDND1-230ENST00000514537 SPATA31A6Q5VVP1 1343 aa33.69■■■□□ 2.98
CLDND1-230ENST00000514537 DHX57Q6P158 1386 aaKnown RBP33.69■■■□□ 2.98
CLDND1-230ENST00000514537 PLEKHH1Q9ULM0 1364 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms