RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 MYO3AQ8NEV4 1616 aa12.56□□□□□ -0.4
COPG1-209ENST00000514478 ILDR2Q71H61 639 aa12.56□□□□□ -0.4
COPG1-209ENST00000514478 ADGRB3O60242 1522 aa12.56□□□□□ -0.4
COPG1-209ENST00000514478 ERVK-7P63135 1459 aa12.55□□□□□ -0.4
COPG1-209ENST00000514478 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
COPG1-209ENST00000514478 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
COPG1-209ENST00000514478 HIRIP3Q9BW71 556 aaPredicted RBP12.55□□□□□ -0.4
COPG1-209ENST00000514478 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
COPG1-209ENST00000514478 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
COPG1-209ENST00000514478 KIAA1210Q9ULL0 1709 aa12.54□□□□□ -0.4
COPG1-209ENST00000514478 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
COPG1-209ENST00000514478 CEP170BQ9Y4F5 1589 aaPredicted RBP12.53□□□□□ -0.4
COPG1-209ENST00000514478 LAMC1P11047 1609 aa12.52□□□□□ -0.4
COPG1-209ENST00000514478 TOM1O60784 492 aa12.52□□□□□ -0.41
COPG1-209ENST00000514478 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
COPG1-209ENST00000514478 ZMYM3Q14202 1370 aa12.52□□□□□ -0.41
COPG1-209ENST00000514478 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
COPG1-209ENST00000514478 FBXO31Q5XUX0 539 aaPredicted RBP12.51□□□□□ -0.41
COPG1-209ENST00000514478 SLC52A1Q9NWF4 448 aa12.51□□□□□ -0.41
COPG1-209ENST00000514478 SCAF1Q9H7N4 1312 aaKnown RBP12.51□□□□□ -0.41
COPG1-209ENST00000514478 ROCK2O75116 1388 aaKnown RBP12.51□□□□□ -0.41
COPG1-209ENST00000514478 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
COPG1-209ENST00000514478 CARD11Q9BXL7 1154 aa12.5□□□□□ -0.41
COPG1-209ENST00000514478 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
COPG1-209ENST00000514478 MYOM2P54296 1465 aa12.5□□□□□ -0.41
COPG1-209ENST00000514478 CPS1P31327 1500 aa12.49□□□□□ -0.41
COPG1-209ENST00000514478 USP47Q96K76 1375 aa12.48□□□□□ -0.41
COPG1-209ENST00000514478 IDI1Q13907 227 aa12.48□□□□□ -0.41
COPG1-209ENST00000514478 PHF23Q9BUL5 403 aaPredicted RBP12.48□□□□□ -0.41
COPG1-209ENST00000514478 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
COPG1-209ENST00000514478 NEXMIFQ5QGS0 1516 aa12.47□□□□□ -0.41
COPG1-209ENST00000514478 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
COPG1-209ENST00000514478 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
COPG1-209ENST00000514478 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
COPG1-209ENST00000514478 TNRQ92752 1358 aa12.45□□□□□ -0.42
COPG1-209ENST00000514478 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
COPG1-209ENST00000514478 ZNF335Q9H4Z2 1342 aaPredicted RBP12.45□□□□□ -0.42
COPG1-209ENST00000514478 A2ML1A8K2U0 1454 aa12.45□□□□□ -0.42
COPG1-209ENST00000514478 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
COPG1-209ENST00000514478 ADGRF5Q8IZF2 1346 aa12.43□□□□□ -0.42
COPG1-209ENST00000514478 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
COPG1-209ENST00000514478 DDX10Q13206 875 aaKnown RBP12.42□□□□□ -0.42
COPG1-209ENST00000514478 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
COPG1-209ENST00000514478 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
COPG1-209ENST00000514478 GPRASP1Q5JY77 1395 aa12.42□□□□□ -0.42
COPG1-209ENST00000514478 NRXN1Q9ULB1 1477 aa12.41□□□□□ -0.42
COPG1-209ENST00000514478 PIP4K2BP78356 416 aa12.41□□□□□ -0.42
COPG1-209ENST00000514478 ANKLE2Q86XL3 938 aa12.41□□□□□ -0.42
COPG1-209ENST00000514478 THEMISQ8N1K5 641 aaPredicted RBP12.41□□□□□ -0.42
COPG1-209ENST00000514478 SETBP1Q9Y6X0 1596 aa12.41□□□□□ -0.42
COPG1-209ENST00000514478 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.42
COPG1-209ENST00000514478 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
COPG1-209ENST00000514478 PIK3C2GO75747 1445 aa12.39□□□□□ -0.43
COPG1-209ENST00000514478 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
COPG1-209ENST00000514478 SCAF11Q99590 1463 aaKnown RBP12.39□□□□□ -0.43
COPG1-209ENST00000514478 NLRP1Q9C000 1473 aa12.39□□□□□ -0.43
COPG1-209ENST00000514478 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
COPG1-209ENST00000514478 SENP3Q9H4L4 574 aaPredicted RBP12.38□□□□□ -0.43
COPG1-209ENST00000514478 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
COPG1-209ENST00000514478 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
COPG1-209ENST00000514478 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
COPG1-209ENST00000514478 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
COPG1-209ENST00000514478 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
COPG1-209ENST00000514478 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
COPG1-209ENST00000514478 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
COPG1-209ENST00000514478 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.35□□□□□ -0.43
COPG1-209ENST00000514478 KIF7Q2M1P5 1343 aa12.35□□□□□ -0.43
COPG1-209ENST00000514478 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
COPG1-209ENST00000514478 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
COPG1-209ENST00000514478 C11orf95C9JLR9 678 aaPredicted RBP12.34□□□□□ -0.43
COPG1-209ENST00000514478 BCANQ96GW7 911 aa12.34□□□□□ -0.43
COPG1-209ENST00000514478 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
COPG1-209ENST00000514478 HSPA1LP34931 641 aa12.33□□□□□ -0.44
COPG1-209ENST00000514478 MIER1Q8N108 512 aa12.33□□□□□ -0.44
COPG1-209ENST00000514478 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
COPG1-209ENST00000514478 TMF1P82094 1093 aa12.32□□□□□ -0.44
COPG1-209ENST00000514478 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
COPG1-209ENST00000514478 NRXN3Q9Y4C0 1643 aa12.32□□□□□ -0.44
COPG1-209ENST00000514478 NPHP4O75161 1426 aaPredicted RBP12.31□□□□□ -0.44
COPG1-209ENST00000514478 TRAK1Q9UPV9 953 aa12.31□□□□□ -0.44
COPG1-209ENST00000514478 MED14O60244 1454 aa12.3□□□□□ -0.44
COPG1-209ENST00000514478 ANP32CO43423 234 aa12.3□□□□□ -0.44
COPG1-209ENST00000514478 EID1Q9Y6B2 187 aa12.3□□□□□ -0.44
COPG1-209ENST00000514478 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
COPG1-209ENST00000514478 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
COPG1-209ENST00000514478 KNDC1Q76NI1 1749 aa12.29□□□□□ -0.44
COPG1-209ENST00000514478 SLC24A1O60721 1099 aa12.29□□□□□ -0.44
COPG1-209ENST00000514478 SLIT1O75093 1534 aa12.28□□□□□ -0.44
COPG1-209ENST00000514478 STK26Q9P289 416 aa12.28□□□□□ -0.44
COPG1-209ENST00000514478 CENPJQ9HC77 1338 aaPredicted RBP12.28□□□□□ -0.44
COPG1-209ENST00000514478 CDCA8Q53HL2 280 aa12.27□□□□□ -0.45
COPG1-209ENST00000514478 TXNDC2Q86VQ3 553 aa12.27□□□□□ -0.45
COPG1-209ENST00000514478 TESK2Q96S53 571 aa12.27□□□□□ -0.45
COPG1-209ENST00000514478 YTHDC2Q9H6S0 1430 aaKnown RBP12.26□□□□□ -0.45
COPG1-209ENST00000514478 MYOM1P52179 1685 aa12.26□□□□□ -0.45
COPG1-209ENST00000514478 ARHGAP23Q9P227 1491 aa12.25□□□□□ -0.45
COPG1-209ENST00000514478 POGKQ9P215 609 aa12.24□□□□□ -0.45
COPG1-209ENST00000514478 PLEKHG1Q9ULL1 1385 aa12.24□□□□□ -0.45
COPG1-209ENST00000514478 DIP2AQ14689 1571 aa12.23□□□□□ -0.45
COPG1-209ENST00000514478 DLC1Q96QB1 1528 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms