RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
DHFR-206ENST00000513048 RALGAPBQ86X10 1494 aa13.37□□□□□ -0.27
DHFR-206ENST00000513048 KCNA4P22459 653 aa13.37□□□□□ -0.27
DHFR-206ENST00000513048 ESF1Q9H501 851 aaKnown RBP13.37□□□□□ -0.27
DHFR-206ENST00000513048 PPLO60437 1756 aa13.37□□□□□ -0.27
DHFR-206ENST00000513048 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
DHFR-206ENST00000513048 MYOM2P54296 1465 aa13.36□□□□□ -0.27
DHFR-206ENST00000513048 TRPM1Q7Z4N2 1603 aa13.36□□□□□ -0.27
DHFR-206ENST00000513048 KDM2AQ9Y2K7 1162 aa13.36□□□□□ -0.27
DHFR-206ENST00000513048 NRXN1Q9ULB1 1477 aa13.36□□□□□ -0.27
DHFR-206ENST00000513048 RIMS1Q86UR5 1692 aaKnown RBP13.35□□□□□ -0.27
DHFR-206ENST00000513048 STAC3Q96MF2 364 aa13.35□□□□□ -0.27
DHFR-206ENST00000513048 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
DHFR-206ENST00000513048 TNRQ92752 1358 aa13.34□□□□□ -0.27
DHFR-206ENST00000513048 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
DHFR-206ENST00000513048 CEBPAP49715 358 aaPredicted RBP13.33□□□□□ -0.28
DHFR-206ENST00000513048 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
DHFR-206ENST00000513048 RPGRIP1LQ68CZ1 1315 aa13.33□□□□□ -0.28
DHFR-206ENST00000513048 KDM5AP29375 1690 aaKnown RBP13.32□□□□□ -0.28
DHFR-206ENST00000513048 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
DHFR-206ENST00000513048 LAMC1P11047 1609 aa13.31□□□□□ -0.28
DHFR-206ENST00000513048 KIAA1210Q9ULL0 1709 aa13.31□□□□□ -0.28
DHFR-206ENST00000513048 CHGAP10645 457 aaKnown RBP13.31□□□□□ -0.28
DHFR-206ENST00000513048 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
DHFR-206ENST00000513048 ADGRF5Q8IZF2 1346 aa13.31□□□□□ -0.28
DHFR-206ENST00000513048 ZFYVE9O95405 1425 aa13.3□□□□□ -0.28
DHFR-206ENST00000513048 UBR1Q8IWV7 1749 aa13.3□□□□□ -0.28
DHFR-206ENST00000513048 NLRP1Q9C000 1473 aa13.29□□□□□ -0.28
DHFR-206ENST00000513048 NBPF1Q3BBV0 1214 aa13.28□□□□□ -0.28
DHFR-206ENST00000513048 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
DHFR-206ENST00000513048 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.29
DHFR-206ENST00000513048 MYO3AQ8NEV4 1616 aa13.27□□□□□ -0.29
DHFR-206ENST00000513048 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
DHFR-206ENST00000513048 EIF4G2P78344 907 aaKnown RBP eCLIP13.25□□□□□ -0.29
DHFR-206ENST00000513048 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
DHFR-206ENST00000513048 PTPRMP28827 1452 aa13.24□□□□□ -0.29
DHFR-206ENST00000513048 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
DHFR-206ENST00000513048 USP47Q96K76 1375 aa13.24□□□□□ -0.29
DHFR-206ENST00000513048 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
DHFR-206ENST00000513048 VGFO15240 615 aaPredicted RBP13.23□□□□□ -0.29
DHFR-206ENST00000513048 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
DHFR-206ENST00000513048 CARD11Q9BXL7 1154 aa13.23□□□□□ -0.29
DHFR-206ENST00000513048 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
DHFR-206ENST00000513048 ADGRB1O14514 1584 aa13.23□□□□□ -0.29
DHFR-206ENST00000513048 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
DHFR-206ENST00000513048 ZNF142P52746 1687 aaPredicted RBP13.22□□□□□ -0.29
DHFR-206ENST00000513048 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
DHFR-206ENST00000513048 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
DHFR-206ENST00000513048 TMEM2Q9UHN6 1383 aa13.21□□□□□ -0.29
DHFR-206ENST00000513048 CEP170BQ9Y4F5 1589 aaPredicted RBP13.21□□□□□ -0.29
DHFR-206ENST00000513048 NUTM2DQ5VT03 806 aaPredicted RBP13.21□□□□□ -0.29
DHFR-206ENST00000513048 SLIT1O75093 1534 aa13.21□□□□□ -0.29
DHFR-206ENST00000513048 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
DHFR-206ENST00000513048 NRXN3Q9Y4C0 1643 aa13.21□□□□□ -0.3
DHFR-206ENST00000513048 ASXL1Q8IXJ9 1541 aa13.2□□□□□ -0.3
DHFR-206ENST00000513048 SETD1AO15047 1707 aaKnown RBP13.2□□□□□ -0.3
DHFR-206ENST00000513048 SCAF11Q99590 1463 aaKnown RBP13.19□□□□□ -0.3
DHFR-206ENST00000513048 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
DHFR-206ENST00000513048 POLR1AO95602 1720 aaPredicted RBP13.18□□□□□ -0.3
DHFR-206ENST00000513048 C11orf95C9JLR9 678 aaPredicted RBP13.17□□□□□ -0.3
DHFR-206ENST00000513048 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.17□□□□□ -0.3
DHFR-206ENST00000513048 ST20-MTHFSA0A0A6YYL1 179 aa13.16□□□□□ -0.3
DHFR-206ENST00000513048 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
DHFR-206ENST00000513048 LTKP29376 864 aa13.15□□□□□ -0.3
DHFR-206ENST00000513048 TESK2Q96S53 571 aa13.15□□□□□ -0.3
DHFR-206ENST00000513048 WASHC2AQ641Q2 1341 aa13.14□□□□□ -0.31
DHFR-206ENST00000513048 THEMISQ8N1K5 641 aaPredicted RBP13.14□□□□□ -0.31
DHFR-206ENST00000513048 CCDC7Q96M83 1385 aa13.14□□□□□ -0.31
DHFR-206ENST00000513048 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
DHFR-206ENST00000513048 MED14O60244 1454 aa13.14□□□□□ -0.31
DHFR-206ENST00000513048 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
DHFR-206ENST00000513048 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
DHFR-206ENST00000513048 TMEM132EQ6IEE7 984 aa13.13□□□□□ -0.31
DHFR-206ENST00000513048 DIEXFQ68CQ4 756 aaKnown RBP13.12□□□□□ -0.31
DHFR-206ENST00000513048 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
DHFR-206ENST00000513048 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
DHFR-206ENST00000513048 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
DHFR-206ENST00000513048 TXNDC2Q86VQ3 553 aa13.11□□□□□ -0.31
DHFR-206ENST00000513048 EIF3AQ14152 1382 aaKnown RBP13.1□□□□□ -0.31
DHFR-206ENST00000513048 YTHDC2Q9H6S0 1430 aaKnown RBP13.1□□□□□ -0.31
DHFR-206ENST00000513048 METP08581 1390 aa13.09□□□□□ -0.31
DHFR-206ENST00000513048 DLC1Q96QB1 1528 aa13.08□□□□□ -0.31
DHFR-206ENST00000513048 LRPPRCP42704 1394 aaKnown RBP13.08□□□□□ -0.31
DHFR-206ENST00000513048 DISP3Q9P2K9 1392 aa13.08□□□□□ -0.31
DHFR-206ENST00000513048 SBNO2Q9Y2G9 1366 aa13.08□□□□□ -0.31
DHFR-206ENST00000513048 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
DHFR-206ENST00000513048 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
DHFR-206ENST00000513048 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.32
DHFR-206ENST00000513048 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
DHFR-206ENST00000513048 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
DHFR-206ENST00000513048 DIP2AQ14689 1571 aa13.07□□□□□ -0.32
DHFR-206ENST00000513048 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
DHFR-206ENST00000513048 TECPR2O15040 1411 aa13.06□□□□□ -0.32
DHFR-206ENST00000513048 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
DHFR-206ENST00000513048 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
DHFR-206ENST00000513048 CPS1P31327 1500 aa13.04□□□□□ -0.32
DHFR-206ENST00000513048 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
DHFR-206ENST00000513048 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
DHFR-206ENST00000513048 TMF1P82094 1093 aa13.03□□□□□ -0.32
DHFR-206ENST00000513048 STK26Q9P289 416 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms