RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 IQGAP1P46940 1657 aa18.61■□□□□ 0.57
DEPDC1B-206ENST00000512452 ATP7AQ04656 1500 aa18.6■□□□□ 0.57
DEPDC1B-206ENST00000512452 L3MBTL2Q969R5 705 aa18.6■□□□□ 0.57
DEPDC1B-206ENST00000512452 TNRQ92752 1358 aa18.59■□□□□ 0.57
DEPDC1B-206ENST00000512452 ROBO1Q9Y6N7 1651 aa18.59■□□□□ 0.57
DEPDC1B-206ENST00000512452 EIF2AK4Q9P2K8 1649 aaKnown RBP18.57■□□□□ 0.56
DEPDC1B-206ENST00000512452 NUTM2BA6NNL0 878 aaPredicted RBP18.57■□□□□ 0.56
DEPDC1B-206ENST00000512452 NUTM2EB1AL46 878 aaPredicted RBP18.57■□□□□ 0.56
DEPDC1B-206ENST00000512452 NUTM2DQ5VT03 806 aaPredicted RBP18.57■□□□□ 0.56
DEPDC1B-206ENST00000512452 FBXO31Q5XUX0 539 aaPredicted RBP18.57■□□□□ 0.56
DEPDC1B-206ENST00000512452 NUTM2AQ8IVF1 878 aaPredicted RBP18.57■□□□□ 0.56
DEPDC1B-206ENST00000512452 LRP6O75581 1613 aa18.56■□□□□ 0.56
DEPDC1B-206ENST00000512452 XIRP1Q702N8 1843 aaKnown RBP18.56■□□□□ 0.56
DEPDC1B-206ENST00000512452 SPATA31A6Q5VVP1 1343 aa18.55■□□□□ 0.56
DEPDC1B-206ENST00000512452 MIER1Q8N108 512 aa18.52■□□□□ 0.56
DEPDC1B-206ENST00000512452 PHLPP1O60346 1717 aa18.52■□□□□ 0.55
DEPDC1B-206ENST00000512452 DHX29Q7Z478 1369 aaKnown RBP18.51■□□□□ 0.55
DEPDC1B-206ENST00000512452 UGGT1Q9NYU2 1555 aa18.51■□□□□ 0.55
DEPDC1B-206ENST00000512452 RGS12O14924 1447 aa18.49■□□□□ 0.55
DEPDC1B-206ENST00000512452 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
DEPDC1B-206ENST00000512452 CCDC144AA2RUR9 1427 aa18.48■□□□□ 0.55
DEPDC1B-206ENST00000512452 KANK1Q14678 1352 aa18.46■□□□□ 0.55
DEPDC1B-206ENST00000512452 ATAD2Q6PL18 1390 aa18.46■□□□□ 0.55
DEPDC1B-206ENST00000512452 PRDM15P57071 1507 aaPredicted RBP18.46■□□□□ 0.55
DEPDC1B-206ENST00000512452 A2MP01023 1474 aa18.46■□□□□ 0.54
DEPDC1B-206ENST00000512452 TMEM94Q12767 1356 aa18.45■□□□□ 0.54
DEPDC1B-206ENST00000512452 TET3O43151 1660 aa18.45■□□□□ 0.54
DEPDC1B-206ENST00000512452 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
DEPDC1B-206ENST00000512452 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
DEPDC1B-206ENST00000512452 RBM6P78332 1123 aaKnown RBP18.44■□□□□ 0.54
DEPDC1B-206ENST00000512452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.542e-6■□□□□ 10.7
DEPDC1B-206ENST00000512452 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
DEPDC1B-206ENST00000512452 AFF2P51816 1311 aa18.43■□□□□ 0.54
DEPDC1B-206ENST00000512452 ZC3H13Q5T200 1668 aaKnown RBP18.42■□□□□ 0.54
DEPDC1B-206ENST00000512452 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
DEPDC1B-206ENST00000512452 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
DEPDC1B-206ENST00000512452 LMTK2Q8IWU2 1503 aa18.41■□□□□ 0.54
DEPDC1B-206ENST00000512452 YY1P25490 414 aa18.41■□□□□ 0.54
DEPDC1B-206ENST00000512452 QTRT2Q9H974 415 aaKnown RBP18.41■□□□□ 0.54
DEPDC1B-206ENST00000512452 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
DEPDC1B-206ENST00000512452 TRPM2O94759 1503 aa18.4■□□□□ 0.54
DEPDC1B-206ENST00000512452 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
DEPDC1B-206ENST00000512452 MROH1Q8NDA8 1641 aa18.4■□□□□ 0.54
DEPDC1B-206ENST00000512452 E9PCH4 1651 aa18.39■□□□□ 0.53
DEPDC1B-206ENST00000512452 LRP5O75197 1615 aa18.38■□□□□ 0.53
DEPDC1B-206ENST00000512452 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
DEPDC1B-206ENST00000512452 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
DEPDC1B-206ENST00000512452 CCDC125Q86Z20 511 aa18.37■□□□□ 0.53
DEPDC1B-206ENST00000512452 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
DEPDC1B-206ENST00000512452 PROSER2Q86WR7 435 aaPredicted RBP18.36■□□□□ 0.53
DEPDC1B-206ENST00000512452 SPHKAPQ2M3C7 1700 aa18.35■□□□□ 0.53
DEPDC1B-206ENST00000512452 KIF3BO15066 747 aa18.35■□□□□ 0.53
DEPDC1B-206ENST00000512452 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.53
DEPDC1B-206ENST00000512452 NGLY1Q96IV0 654 aa18.33■□□□□ 0.52
DEPDC1B-206ENST00000512452 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
DEPDC1B-206ENST00000512452 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
DEPDC1B-206ENST00000512452 LAMC1P11047 1609 aa18.32■□□□□ 0.52
DEPDC1B-206ENST00000512452 SCAF11Q99590 1463 aaKnown RBP18.32■□□□□ 0.52
DEPDC1B-206ENST00000512452 TXNDC2Q86VQ3 553 aa18.31■□□□□ 0.52
DEPDC1B-206ENST00000512452 USP47Q96K76 1375 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 CEP152O94986 1710 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 KCNA6P17658 529 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 LTKP29376 864 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 DCAF11Q8TEB1 546 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 SHPRHQ149N8 1683 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 MSH6P52701 1360 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 CCDC7Q96M83 1385 aa18.3■□□□□ 0.52
DEPDC1B-206ENST00000512452 WASHC2CQ9Y4E1 1318 aa18.29■□□□□ 0.52
DEPDC1B-206ENST00000512452 TRPM1Q7Z4N2 1603 aa18.29■□□□□ 0.52
DEPDC1B-206ENST00000512452 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
DEPDC1B-206ENST00000512452 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
DEPDC1B-206ENST00000512452 ANP32CO43423 234 aa18.27■□□□□ 0.52
DEPDC1B-206ENST00000512452 C8orf37Q96NL8 207 aa18.26■□□□□ 0.51
DEPDC1B-206ENST00000512452 CLTCL1P53675 1640 aa18.26■□□□□ 0.51
DEPDC1B-206ENST00000512452 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
DEPDC1B-206ENST00000512452 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
DEPDC1B-206ENST00000512452 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
DEPDC1B-206ENST00000512452 ROCK2O75116 1388 aaKnown RBP18.23■□□□□ 0.51
DEPDC1B-206ENST00000512452 KDM2AQ9Y2K7 1162 aa18.23■□□□□ 0.51
DEPDC1B-206ENST00000512452 ABCC3O15438 1527 aa18.23■□□□□ 0.51
DEPDC1B-206ENST00000512452 EID1Q9Y6B2 187 aa18.22■□□□□ 0.51
DEPDC1B-206ENST00000512452 ARHGAP31Q2M1Z3 1444 aa18.21■□□□□ 0.51
DEPDC1B-206ENST00000512452 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
DEPDC1B-206ENST00000512452 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
DEPDC1B-206ENST00000512452 NWD1Q149M9 1564 aa18.19■□□□□ 0.5
DEPDC1B-206ENST00000512452 MYOM2P54296 1465 aa18.19■□□□□ 0.5
DEPDC1B-206ENST00000512452 AHDC1Q5TGY3 1603 aaPredicted RBP18.17■□□□□ 0.5
DEPDC1B-206ENST00000512452 KIF1BO60333 1816 aa18.17■□□□□ 0.5
DEPDC1B-206ENST00000512452 C11orf95C9JLR9 678 aaPredicted RBP18.17■□□□□ 0.5
DEPDC1B-206ENST00000512452 ARHGAP23Q9P227 1491 aa18.17■□□□□ 0.5
DEPDC1B-206ENST00000512452 KIAA1210Q9ULL0 1709 aa18.17■□□□□ 0.5
DEPDC1B-206ENST00000512452 NHSL1Q5SYE7 1610 aa18.16■□□□□ 0.5
DEPDC1B-206ENST00000512452 SLIT1O75093 1534 aa18.15■□□□□ 0.5
DEPDC1B-206ENST00000512452 PSDA5PKW4 1024 aaPredicted RBP18.15■□□□□ 0.5
DEPDC1B-206ENST00000512452 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
DEPDC1B-206ENST00000512452 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
DEPDC1B-206ENST00000512452 NOS1P29475 1434 aa18.15■□□□□ 0.5
DEPDC1B-206ENST00000512452 ADGRB3O60242 1522 aa18.14■□□□□ 0.49
DEPDC1B-206ENST00000512452 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms