RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
PRDM16-205ENST00000509860 NEXMIFQ5QGS0 1516 aa17.45■□□□□ 0.38
PRDM16-205ENST00000509860 CENPBP07199 599 aaPredicted RBP17.45■□□□□ 0.38
PRDM16-205ENST00000509860 TESK2Q96S53 571 aa17.45■□□□□ 0.38
PRDM16-205ENST00000509860 TMEM131LA2VDJ0 1609 aa17.44■□□□□ 0.38
PRDM16-205ENST00000509860 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
PRDM16-205ENST00000509860 DISP3Q9P2K9 1392 aa17.42■□□□□ 0.38
PRDM16-205ENST00000509860 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
PRDM16-205ENST00000509860 MYOM1P52179 1685 aa17.42■□□□□ 0.38
PRDM16-205ENST00000509860 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
PRDM16-205ENST00000509860 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
PRDM16-205ENST00000509860 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
PRDM16-205ENST00000509860 PIK3C2GO75747 1445 aa17.4■□□□□ 0.38
PRDM16-205ENST00000509860 ANP32CO43423 234 aa17.4■□□□□ 0.38
PRDM16-205ENST00000509860 CCDC184Q52MB2 194 aa17.4■□□□□ 0.38
PRDM16-205ENST00000509860 ARID4BQ4LE39 1312 aaPredicted RBP17.39■□□□□ 0.38
PRDM16-205ENST00000509860 SETBP1Q9Y6X0 1596 aa17.38■□□□□ 0.37
PRDM16-205ENST00000509860 ERVK-7P63135 1459 aa17.37■□□□□ 0.37
PRDM16-205ENST00000509860 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
PRDM16-205ENST00000509860 SPATA31D1Q6ZQQ2 1576 aa17.37■□□□□ 0.37
PRDM16-205ENST00000509860 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
PRDM16-205ENST00000509860 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
PRDM16-205ENST00000509860 CFAP70Q5T0N1 1121 aa17.33■□□□□ 0.36
PRDM16-205ENST00000509860 STAC3Q96MF2 364 aa17.32■□□□□ 0.36
PRDM16-205ENST00000509860 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
PRDM16-205ENST00000509860 ARHGEF28Q8N1W1 1705 aaKnown RBP17.32■□□□□ 0.36
PRDM16-205ENST00000509860 IDI1Q13907 227 aa17.31■□□□□ 0.36
PRDM16-205ENST00000509860 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
PRDM16-205ENST00000509860 QRICH2Q9H0J4 1663 aa17.3■□□□□ 0.36
PRDM16-205ENST00000509860 KDM5AP29375 1690 aaKnown RBP17.27■□□□□ 0.36
PRDM16-205ENST00000509860 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
PRDM16-205ENST00000509860 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
PRDM16-205ENST00000509860 ZFYVE9O95405 1425 aa17.25■□□□□ 0.35
PRDM16-205ENST00000509860 NRXN3Q9Y4C0 1643 aa17.25■□□□□ 0.35
PRDM16-205ENST00000509860 C14orf93Q9H972 538 aaKnown RBP17.24■□□□□ 0.35
PRDM16-205ENST00000509860 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
PRDM16-205ENST00000509860 CHGAP10645 457 aaKnown RBP17.23■□□□□ 0.35
PRDM16-205ENST00000509860 A2ML1A8K2U0 1454 aa17.23■□□□□ 0.35
PRDM16-205ENST00000509860 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
PRDM16-205ENST00000509860 PPP6R1Q9UPN7 881 aa17.22■□□□□ 0.35
PRDM16-205ENST00000509860 SLC52A1Q9NWF4 448 aa17.21■□□□□ 0.35
PRDM16-205ENST00000509860 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.34
PRDM16-205ENST00000509860 PTPRMP28827 1452 aa17.2■□□□□ 0.34
PRDM16-205ENST00000509860 MLECQ14165 292 aa17.2■□□□□ 0.34
PRDM16-205ENST00000509860 C3P01024 1663 aa17.2■□□□□ 0.34
PRDM16-205ENST00000509860 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
PRDM16-205ENST00000509860 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
PRDM16-205ENST00000509860 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
PRDM16-205ENST00000509860 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
PRDM16-205ENST00000509860 TMEM132EQ6IEE7 984 aa17.18■□□□□ 0.34
PRDM16-205ENST00000509860 TULP4Q9NRJ4 1543 aa17.18■□□□□ 0.34
PRDM16-205ENST00000509860 TMF1P82094 1093 aa17.18■□□□□ 0.34
PRDM16-205ENST00000509860 SBNO2Q9Y2G9 1366 aa17.17■□□□□ 0.34
PRDM16-205ENST00000509860 EIF3AQ14152 1382 aaKnown RBP17.17■□□□□ 0.34
PRDM16-205ENST00000509860 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
PRDM16-205ENST00000509860 PANK3Q9H999 370 aa17.15■□□□□ 0.34
PRDM16-205ENST00000509860 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
PRDM16-205ENST00000509860 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
PRDM16-205ENST00000509860 VGFO15240 615 aaPredicted RBP17.11■□□□□ 0.33
PRDM16-205ENST00000509860 KTN1Q86UP2 1357 aaKnown RBP17.09■□□□□ 0.33
PRDM16-205ENST00000509860 BCANQ96GW7 911 aa17.09■□□□□ 0.33
PRDM16-205ENST00000509860 RIMS2Q9UQ26 1411 aa17.09■□□□□ 0.33
PRDM16-205ENST00000509860 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
PRDM16-205ENST00000509860 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
PRDM16-205ENST00000509860 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
PRDM16-205ENST00000509860 MYBBP1AQ9BQG0 1328 aaKnown RBP17.08■□□□□ 0.32
PRDM16-205ENST00000509860 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
PRDM16-205ENST00000509860 PNISRQ8TF01 805 aaKnown RBP17.07■□□□□ 0.32
PRDM16-205ENST00000509860 YTHDC2Q9H6S0 1430 aaKnown RBP17.06■□□□□ 0.32
PRDM16-205ENST00000509860 KNDC1Q76NI1 1749 aa17.06■□□□□ 0.32
PRDM16-205ENST00000509860 USP32Q8NFA0 1604 aa17.06■□□□□ 0.32
PRDM16-205ENST00000509860 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
PRDM16-205ENST00000509860 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
PRDM16-205ENST00000509860 CARD14Q9BXL6 1004 aa17.06■□□□□ 0.32
PRDM16-205ENST00000509860 TNRQ92752 1358 aa17.05■□□□□ 0.32
PRDM16-205ENST00000509860 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
PRDM16-205ENST00000509860 RALBP1Q15311 655 aa17.05■□□□□ 0.32
PRDM16-205ENST00000509860 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
PRDM16-205ENST00000509860 HNRNPUQ00839 825 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRDM16-205ENST00000509860 CC2D1BQ5T0F9 858 aaKnown RBP17.04■□□□□ 0.32
PRDM16-205ENST00000509860 DLC1Q96QB1 1528 aa17.03■□□□□ 0.32
PRDM16-205ENST00000509860 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
PRDM16-205ENST00000509860 CEBPAP49715 358 aaPredicted RBP17.01■□□□□ 0.31
PRDM16-205ENST00000509860 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
PRDM16-205ENST00000509860 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
PRDM16-205ENST00000509860 METP08581 1390 aa17■□□□□ 0.31
PRDM16-205ENST00000509860 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
PRDM16-205ENST00000509860 RIMS1Q86UR5 1692 aaKnown RBP17■□□□□ 0.31
PRDM16-205ENST00000509860 ADAMTSL3P82987 1691 aa16.99■□□□□ 0.31
PRDM16-205ENST00000509860 CDCA8Q53HL2 280 aa16.98■□□□□ 0.31
PRDM16-205ENST00000509860 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
PRDM16-205ENST00000509860 NLRP1Q9C000 1473 aa16.98■□□□□ 0.31
PRDM16-205ENST00000509860 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
PRDM16-205ENST00000509860 SLIT1O75093 1534 aa16.98■□□□□ 0.31
PRDM16-205ENST00000509860 CPS1P31327 1500 aa16.98■□□□□ 0.31
PRDM16-205ENST00000509860 ADAMTS13Q76LX8 1427 aa16.98■□□□□ 0.31
PRDM16-205ENST00000509860 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
PRDM16-205ENST00000509860 ARHGAP23Q9P227 1491 aa16.97■□□□□ 0.31
PRDM16-205ENST00000509860 STK26Q9P289 416 aa16.97■□□□□ 0.31
PRDM16-205ENST00000509860 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms