RNA–Protein interactions for RNA: ENST00000508726.5

CDK7-206, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-206ENST00000508726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.1□□□□□ -0.47
CDK7-206ENST00000508726 ERBB3P21860 1342 aa12.1□□□□□ -0.47
CDK7-206ENST00000508726 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
CDK7-206ENST00000508726 PACS2Q86VP3 889 aa12.09□□□□□ -0.47
CDK7-206ENST00000508726 EYA1Q99502 592 aa12.09□□□□□ -0.47
CDK7-206ENST00000508726 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
CDK7-206ENST00000508726 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
CDK7-206ENST00000508726 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
CDK7-206ENST00000508726 PROX2Q3B8N5 592 aa12.07□□□□□ -0.48
CDK7-206ENST00000508726 VARS2Q5ST30 1063 aaKnown RBP12.07□□□□□ -0.48
CDK7-206ENST00000508726 PNMA3Q9UL41 463 aa12.07□□□□□ -0.48
CDK7-206ENST00000508726 TATDN2Q93075 761 aa12.06□□□□□ -0.48
CDK7-206ENST00000508726 PCMTD1Q96MG8 357 aaPredicted RBP12.05□□□□□ -0.48
CDK7-206ENST00000508726 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
CDK7-206ENST00000508726 ST18O60284 1047 aa12.04□□□□□ -0.48
CDK7-206ENST00000508726 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
CDK7-206ENST00000508726 DNAJB2P25686 324 aa12.04□□□□□ -0.48
CDK7-206ENST00000508726 EMP3P54852 163 aa12.04□□□□□ -0.48
CDK7-206ENST00000508726 SH3D19Q5HYK7 790 aa12.04□□□□□ -0.48
CDK7-206ENST00000508726 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
CDK7-206ENST00000508726 PSEN2P49810 448 aa12.03□□□□□ -0.48
CDK7-206ENST00000508726 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
CDK7-206ENST00000508726 SMAPO00193 183 aa12.01□□□□□ -0.49
CDK7-206ENST00000508726 ARHGAP33O14559 1287 aa12.01□□□□□ -0.49
CDK7-206ENST00000508726 WDR62O43379 1518 aa12.01□□□□□ -0.49
CDK7-206ENST00000508726 MARVELD3Q96A59 401 aa12□□□□□ -0.49
CDK7-206ENST00000508726 KIAA1468Q9P260 1216 aa12□□□□□ -0.49
CDK7-206ENST00000508726 SULF1Q8IWU6 871 aa11.99□□□□□ -0.49
CDK7-206ENST00000508726 TMEM134Q9H6X4 195 aa11.99□□□□□ -0.49
CDK7-206ENST00000508726 PBX2P40425 430 aa11.98□□□□□ -0.49
CDK7-206ENST00000508726 SKIV2LQ15477 1246 aaKnown RBP11.98□□□□□ -0.49
CDK7-206ENST00000508726 POTEEQ6S8J3 1075 aa11.97□□□□□ -0.49
CDK7-206ENST00000508726 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
CDK7-206ENST00000508726 AXIN2Q9Y2T1 843 aa11.97□□□□□ -0.49
CDK7-206ENST00000508726 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
CDK7-206ENST00000508726 DDX11L8A8MPP1 907 aa11.96□□□□□ -0.49
CDK7-206ENST00000508726 CD46P15529 392 aa11.96□□□□□ -0.49
CDK7-206ENST00000508726 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.49
CDK7-206ENST00000508726 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
CDK7-206ENST00000508726 RABGEF1Q9UJ41 708 aa11.96□□□□□ -0.49
CDK7-206ENST00000508726 KIF21AQ7Z4S6 1674 aa11.96□□□□□ -0.5
CDK7-206ENST00000508726 FAM205CA6NFA0 338 aa11.95□□□□□ -0.5
CDK7-206ENST00000508726 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
CDK7-206ENST00000508726 DMRTA1Q5VZB9 504 aa11.95□□□□□ -0.5
CDK7-206ENST00000508726 URB2Q14146 1524 aaKnown RBP11.95□□□□□ -0.5
CDK7-206ENST00000508726 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
CDK7-206ENST00000508726 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
CDK7-206ENST00000508726 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
CDK7-206ENST00000508726 ZNF687Q8N1G0 1237 aa11.94□□□□□ -0.5
CDK7-206ENST00000508726 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
CDK7-206ENST00000508726 POLR3EQ9NVU0 708 aa11.94□□□□□ -0.5
CDK7-206ENST00000508726 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
CDK7-206ENST00000508726 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
CDK7-206ENST00000508726 RDH13Q8NBN7 331 aa11.92□□□□□ -0.5
CDK7-206ENST00000508726 FAM163AQ96GL9 167 aaPredicted RBP11.92□□□□□ -0.5
CDK7-206ENST00000508726 SEPT9Q9UHD8 586 aaPredicted RBP11.92□□□□□ -0.5
CDK7-206ENST00000508726 CLK2P49760 499 aaKnown RBP11.91□□□□□ -0.5
CDK7-206ENST00000508726 SOGA1O94964 1423 aa11.91□□□□□ -0.5
CDK7-206ENST00000508726 NUTM1Q86Y26 1132 aa11.9□□□□□ -0.5
CDK7-206ENST00000508726 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
CDK7-206ENST00000508726 SPIRE2Q8WWL2 714 aa11.9□□□□□ -0.5
CDK7-206ENST00000508726 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
CDK7-206ENST00000508726 FLIIQ13045 1269 aa11.89□□□□□ -0.51
CDK7-206ENST00000508726 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
CDK7-206ENST00000508726 FAM98CQ17RN3 349 aaKnown RBP11.88□□□□□ -0.51
CDK7-206ENST00000508726 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
CDK7-206ENST00000508726 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
CDK7-206ENST00000508726 RSPH4AQ5TD94 716 aa11.87□□□□□ -0.51
CDK7-206ENST00000508726 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
CDK7-206ENST00000508726 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDK7-206ENST00000508726 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
CDK7-206ENST00000508726 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
CDK7-206ENST00000508726 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
CDK7-206ENST00000508726 FGD5Q6ZNL6 1462 aa11.84□□□□□ -0.51
CDK7-206ENST00000508726 LAPTM4BQ86VI4 370 aa11.84□□□□□ -0.51
CDK7-206ENST00000508726 LIMD1Q9UGP4 676 aa11.84□□□□□ -0.51
CDK7-206ENST00000508726 CUX1P39880 1505 aa11.83□□□□□ -0.52
CDK7-206ENST00000508726 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
CDK7-206ENST00000508726 TK2O00142 265 aa11.83□□□□□ -0.52
CDK7-206ENST00000508726 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
CDK7-206ENST00000508726 ZMYND15Q9H091 742 aa11.83□□□□□ -0.52
CDK7-206ENST00000508726 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
CDK7-206ENST00000508726 MOXD2PA6NHM9 499 aa11.81□□□□□ -0.52
CDK7-206ENST00000508726 SPTLC1O15269 473 aa11.81□□□□□ -0.52
CDK7-206ENST00000508726 KDM4AO75164 1064 aa11.81□□□□□ -0.52
CDK7-206ENST00000508726 GCGRP47871 477 aa11.81□□□□□ -0.52
CDK7-206ENST00000508726 SLC10A3P09131 477 aa11.8□□□□□ -0.52
CDK7-206ENST00000508726 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDK7-206ENST00000508726 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
CDK7-206ENST00000508726 SAMD7Q7Z3H4 446 aa11.8□□□□□ -0.52
CDK7-206ENST00000508726 SLF2Q8IX21 1173 aa11.8□□□□□ -0.52
CDK7-206ENST00000508726 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
CDK7-206ENST00000508726 USP46P62068 366 aa11.79□□□□□ -0.52
CDK7-206ENST00000508726 LCE2DQ5TA82 110 aaPredicted RBP11.79□□□□□ -0.52
CDK7-206ENST00000508726 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
CDK7-206ENST00000508726 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
CDK7-206ENST00000508726 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
CDK7-206ENST00000508726 RNF40O75150 1001 aa11.78□□□□□ -0.52
CDK7-206ENST00000508726 NDUFV2P19404 249 aa11.78□□□□□ -0.52
CDK7-206ENST00000508726 GJA5P36382 358 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms