RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 ZMYND10O75800 440 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 COL9A1P20849 921 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 PSEN2P49810 448 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 HIC1Q14526 733 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 POTEBQ6S5H4 581 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 NPDC1Q9NQX5 325 aaPredicted RBP6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 AXIN2Q9Y2T1 843 aa6.37□□□□□ -1.39
HMGN1P11-201ENST00000508668 TTBK1Q5TCY1 1321 aaPredicted RBP6.36□□□□□ -1.39
HMGN1P11-201ENST00000508668 FECHP22830 423 aa6.36□□□□□ -1.39
HMGN1P11-201ENST00000508668 ZNF687Q8N1G0 1237 aa6.36□□□□□ -1.39
HMGN1P11-201ENST00000508668 KRI1Q8N9T8 703 aaKnown RBP6.36□□□□□ -1.39
HMGN1P11-201ENST00000508668 TOP2BQ02880 1626 aa6.36□□□□□ -1.39
HMGN1P11-201ENST00000508668 PPP1R3GB7ZBB8 358 aa6.35□□□□□ -1.39
HMGN1P11-201ENST00000508668 ARHGAP33O14559 1287 aa6.35□□□□□ -1.39
HMGN1P11-201ENST00000508668 POTEEQ6S8J3 1075 aa6.35□□□□□ -1.39
HMGN1P11-201ENST00000508668 BARGINQ6ZT62 677 aa6.35□□□□□ -1.39
HMGN1P11-201ENST00000508668 CERKQ8TCT0 537 aa6.35□□□□□ -1.39
HMGN1P11-201ENST00000508668 SLC24A3Q9HC58 644 aa6.35□□□□□ -1.39
HMGN1P11-201ENST00000508668 MYT1LQ9UL68 1186 aa6.35□□□□□ -1.39
HMGN1P11-201ENST00000508668 ABCA5Q8WWZ7 1642 aa6.35□□□□□ -1.39
HMGN1P11-201ENST00000508668 PADI6Q6TGC4 694 aa6.34□□□□□ -1.39
HMGN1P11-201ENST00000508668 ERICH3Q5RHP9 1530 aa6.34□□□□□ -1.39
HMGN1P11-201ENST00000508668 KIF27Q86VH2 1401 aa6.33□□□□□ -1.4
HMGN1P11-201ENST00000508668 PRG4Q92954 1404 aaPredicted RBP6.33□□□□□ -1.4
HMGN1P11-201ENST00000508668 ADAMTS12P58397 1594 aa6.33□□□□□ -1.4
HMGN1P11-201ENST00000508668 PRSS12P56730 875 aa6.33□□□□□ -1.4
HMGN1P11-201ENST00000508668 DMRTA1Q5VZB9 504 aa6.33□□□□□ -1.4
HMGN1P11-201ENST00000508668 CDCA7LQ96GN5 454 aa6.33□□□□□ -1.4
HMGN1P11-201ENST00000508668 BIVM-ERCC5R4GMW8 1640 aa6.32□□□□□ -1.4
HMGN1P11-201ENST00000508668 PBX2P40425 430 aa6.32□□□□□ -1.4
HMGN1P11-201ENST00000508668 MAP2K5Q13163 448 aa6.32□□□□□ -1.4
HMGN1P11-201ENST00000508668 PROX2Q3B8N5 592 aa6.32□□□□□ -1.4
HMGN1P11-201ENST00000508668 FAM69CQ0P6D2 419 aa6.31□□□□□ -1.4
HMGN1P11-201ENST00000508668 FAM161AQ3B820 660 aa6.31□□□□□ -1.4
HMGN1P11-201ENST00000508668 CCDC102AQ96A19 550 aa6.31□□□□□ -1.4
HMGN1P11-201ENST00000508668 TSKSQ9UJT2 592 aa6.31□□□□□ -1.4
HMGN1P11-201ENST00000508668 NUP160Q12769 1436 aa6.31□□□□□ -1.4
HMGN1P11-201ENST00000508668 CARMIL2Q6F5E8 1435 aa6.31□□□□□ -1.4
HMGN1P11-201ENST00000508668 CEP170Q5SW79 1584 aa6.31□□□□□ -1.4
HMGN1P11-201ENST00000508668 MINK1Q8N4C8 1332 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P11-201ENST00000508668 TRIM6-TRIM34B2RNG4 842 aa6.3□□□□□ -1.4
HMGN1P11-201ENST00000508668 ZBED2Q9BTP6 218 aa6.3□□□□□ -1.4
HMGN1P11-201ENST00000508668 RBM27Q9P2N5 1060 aaKnown RBP6.3□□□□□ -1.4
HMGN1P11-201ENST00000508668 IRF6O14896 467 aa6.29□□□□□ -1.4
HMGN1P11-201ENST00000508668 AK7Q96M32 723 aa6.29□□□□□ -1.4
HMGN1P11-201ENST00000508668 FAM198AQ9UFP1 575 aa6.29□□□□□ -1.4
HMGN1P11-201ENST00000508668 LSM11P83369 360 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGN1P11-201ENST00000508668 PACS2Q86VP3 889 aa6.28□□□□□ -1.4
HMGN1P11-201ENST00000508668 NBPF26B4DH59 902 aa6.27□□□□□ -1.41
HMGN1P11-201ENST00000508668 ANKRD13DQ6ZTN6 518 aa6.27□□□□□ -1.41
HMGN1P11-201ENST00000508668 NUDT18Q6ZVK8 323 aa6.27□□□□□ -1.41
HMGN1P11-201ENST00000508668 TTC13Q8NBP0 860 aa6.27□□□□□ -1.41
HMGN1P11-201ENST00000508668 KIAA1468Q9P260 1216 aa6.27□□□□□ -1.41
HMGN1P11-201ENST00000508668 PNMA3Q9UL41 463 aa6.27□□□□□ -1.41
HMGN1P11-201ENST00000508668 VPS9D1Q9Y2B5 631 aa6.27□□□□□ -1.41
HMGN1P11-201ENST00000508668 ADGRG1Q9Y653 693 aa6.27□□□□□ -1.41
HMGN1P11-201ENST00000508668 CUL7Q14999 1698 aa6.26□□□□□ -1.41
HMGN1P11-201ENST00000508668 PTPRGP23470 1445 aa6.26□□□□□ -1.41
HMGN1P11-201ENST00000508668 C3orf80F5H4A9 247 aa6.26□□□□□ -1.41
HMGN1P11-201ENST00000508668 SMAPO00193 183 aa6.26□□□□□ -1.41
HMGN1P11-201ENST00000508668 TRIM66O15016 1216 aa6.26□□□□□ -1.41
HMGN1P11-201ENST00000508668 ADGRD1Q6QNK2 874 aa6.26□□□□□ -1.41
HMGN1P11-201ENST00000508668 TATDN2Q93075 761 aa6.26□□□□□ -1.41
HMGN1P11-201ENST00000508668 CARMIL1Q5VZK9 1371 aa6.26□□□□□ -1.41
HMGN1P11-201ENST00000508668 KIAA0586Q9BVV6 1533 aa6.25□□□□□ -1.41
HMGN1P11-201ENST00000508668 OATP04181 439 aa6.25□□□□□ -1.41
HMGN1P11-201ENST00000508668 METTL3Q86U44 580 aaKnown RBP6.25□□□□□ -1.41
HMGN1P11-201ENST00000508668 RBM46Q8TBY0 533 aaKnown RBP6.25□□□□□ -1.41
HMGN1P11-201ENST00000508668 SLC4A5Q9BY07 1137 aa6.25□□□□□ -1.41
HMGN1P11-201ENST00000508668 SEPT9Q9UHD8 586 aaPredicted RBP6.25□□□□□ -1.41
HMGN1P11-201ENST00000508668 RABGEF1Q9UJ41 708 aa6.25□□□□□ -1.41
HMGN1P11-201ENST00000508668 SHROOM2Q13796 1616 aa6.25□□□□□ -1.41
HMGN1P11-201ENST00000508668 ERCC6L2Q5T890 1561 aa6.24□□□□□ -1.41
HMGN1P11-201ENST00000508668 IGF1RP08069 1367 aa6.24□□□□□ -1.41
HMGN1P11-201ENST00000508668 TK2O00142 265 aa6.24□□□□□ -1.41
HMGN1P11-201ENST00000508668 ONECUT3O60422 494 aaPredicted RBP6.24□□□□□ -1.41
HMGN1P11-201ENST00000508668 PXYLP1Q8TE99 480 aa6.24□□□□□ -1.41
HMGN1P11-201ENST00000508668 NLRP7Q8WX94 980 aa6.24□□□□□ -1.41
HMGN1P11-201ENST00000508668 TNIKQ9UKE5 1360 aa6.23□□□□□ -1.41
HMGN1P11-201ENST00000508668 PDE4DQ08499 809 aa6.23□□□□□ -1.41
HMGN1P11-201ENST00000508668 TTLL12Q14166 644 aaPredicted RBP6.23□□□□□ -1.41
HMGN1P11-201ENST00000508668 NEUROD2Q15784 382 aa6.23□□□□□ -1.41
HMGN1P11-201ENST00000508668 PHOX2BQ99453 314 aa6.23□□□□□ -1.41
HMGN1P11-201ENST00000508668 NBPF3Q9H094 633 aa6.23□□□□□ -1.41
HMGN1P11-201ENST00000508668 RUSC2Q8N2Y8 1516 aa6.23□□□□□ -1.41
HMGN1P11-201ENST00000508668 MDM2Q00987 491 aaPredicted RBP6.22□□□□□ -1.41
HMGN1P11-201ENST00000508668 STAC3Q96MF2 364 aa6.22□□□□□ -1.41
HMGN1P11-201ENST00000508668 EYA1Q99502 592 aa6.22□□□□□ -1.41
HMGN1P11-201ENST00000508668 RCCD1A6NED2 376 aa6.21□□□□□ -1.42
HMGN1P11-201ENST00000508668 BHMG1C9JSJ3 638 aaPredicted RBP6.21□□□□□ -1.42
HMGN1P11-201ENST00000508668 AMHR2Q16671 573 aa6.21□□□□□ -1.42
HMGN1P11-201ENST00000508668 MRPL50Q8N5N7 158 aaKnown RBP6.21□□□□□ -1.42
HMGN1P11-201ENST00000508668 ABCC10Q5T3U5 1492 aa6.21□□□□□ -1.42
HMGN1P11-201ENST00000508668 MAPKBP1O60336 1514 aa6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 IQGAP2Q13576 1575 aa6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 HRO43593 1189 aa6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 DNAJB2P25686 324 aa6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 BRPF1P55201 1214 aaPredicted RBP6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 FAM98CQ17RN3 349 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms