RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 STAC3Q96MF2 364 aa20.52■□□□□ 0.87
YIPF3-213ENST00000506469 MYO5BQ9ULV0 1848 aa20.51■□□□□ 0.87
YIPF3-213ENST00000506469 NUTM2DQ5VT03 806 aaPredicted RBP20.51■□□□□ 0.87
YIPF3-213ENST00000506469 MYOM2P54296 1465 aa20.5■□□□□ 0.87
YIPF3-213ENST00000506469 ZFYVE9O95405 1425 aa20.49■□□□□ 0.87
YIPF3-213ENST00000506469 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
YIPF3-213ENST00000506469 VGFO15240 615 aaPredicted RBP20.49■□□□□ 0.87
YIPF3-213ENST00000506469 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
YIPF3-213ENST00000506469 SETD1BQ9UPS6 1966 aaKnown RBP20.48■□□□□ 0.87
YIPF3-213ENST00000506469 IFT172Q9UG01 1749 aa20.48■□□□□ 0.87
YIPF3-213ENST00000506469 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
YIPF3-213ENST00000506469 ARHGAP23Q9P227 1491 aa20.48■□□□□ 0.87
YIPF3-213ENST00000506469 PRAG1Q86YV5 1406 aa20.48■□□□□ 0.87
YIPF3-213ENST00000506469 SLIT1O75093 1534 aa20.47■□□□□ 0.87
YIPF3-213ENST00000506469 HDGFP51858 240 aaKnown RBP20.47■□□□□ 0.87
YIPF3-213ENST00000506469 PPLO60437 1756 aa20.47■□□□□ 0.87
YIPF3-213ENST00000506469 NRXN1Q9ULB1 1477 aa20.45■□□□□ 0.86
YIPF3-213ENST00000506469 TXNDC2Q86VQ3 553 aa20.44■□□□□ 0.86
YIPF3-213ENST00000506469 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
YIPF3-213ENST00000506469 LTKP29376 864 aa20.44■□□□□ 0.86
YIPF3-213ENST00000506469 PIK3C2GO75747 1445 aa20.42■□□□□ 0.86
YIPF3-213ENST00000506469 LMTK3Q96Q04 1460 aa20.42■□□□□ 0.86
YIPF3-213ENST00000506469 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
YIPF3-213ENST00000506469 SCAF11Q99590 1463 aaKnown RBP20.4■□□□□ 0.86
YIPF3-213ENST00000506469 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
YIPF3-213ENST00000506469 HSPA2P54652 639 aa20.39■□□□□ 0.85
YIPF3-213ENST00000506469 CFAP70Q5T0N1 1121 aa20.38■□□□□ 0.85
YIPF3-213ENST00000506469 PLEKHG1Q9ULL1 1385 aa20.38■□□□□ 0.85
YIPF3-213ENST00000506469 RALGAPBQ86X10 1494 aa20.37■□□□□ 0.85
YIPF3-213ENST00000506469 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
YIPF3-213ENST00000506469 NBPF1Q3BBV0 1214 aa20.36■□□□□ 0.85
YIPF3-213ENST00000506469 BCANQ96GW7 911 aa20.36■□□□□ 0.85
YIPF3-213ENST00000506469 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
YIPF3-213ENST00000506469 NCKAP5LQ9HCH0 1330 aa20.34■□□□□ 0.85
YIPF3-213ENST00000506469 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
YIPF3-213ENST00000506469 SETBP1Q9Y6X0 1596 aa20.33■□□□□ 0.85
YIPF3-213ENST00000506469 ALKQ9UM73 1620 aa20.32■□□□□ 0.84
YIPF3-213ENST00000506469 NRXN3Q9Y4C0 1643 aa20.31■□□□□ 0.84
YIPF3-213ENST00000506469 KIAA1210Q9ULL0 1709 aa20.31■□□□□ 0.84
YIPF3-213ENST00000506469 NPHP4O75161 1426 aaPredicted RBP20.3■□□□□ 0.84
YIPF3-213ENST00000506469 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
YIPF3-213ENST00000506469 GPRASP1Q5JY77 1395 aa20.3■□□□□ 0.84
YIPF3-213ENST00000506469 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
YIPF3-213ENST00000506469 IQGAP1P46940 1657 aa20.3■□□□□ 0.84
YIPF3-213ENST00000506469 LAMC1P11047 1609 aa20.3■□□□□ 0.84
YIPF3-213ENST00000506469 MED14O60244 1454 aa20.29■□□□□ 0.84
YIPF3-213ENST00000506469 TMEM132EQ6IEE7 984 aa20.28■□□□□ 0.84
YIPF3-213ENST00000506469 SLC26A8Q96RN1 970 aa20.28■□□□□ 0.84
YIPF3-213ENST00000506469 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
YIPF3-213ENST00000506469 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.84
YIPF3-213ENST00000506469 ADGRB1O14514 1584 aa20.27■□□□□ 0.83
YIPF3-213ENST00000506469 TBX22Q9Y458 520 aa20.27■□□□□ 0.83
YIPF3-213ENST00000506469 ASXL1Q8IXJ9 1541 aa20.26■□□□□ 0.83
YIPF3-213ENST00000506469 METP08581 1390 aa20.25■□□□□ 0.83
YIPF3-213ENST00000506469 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
YIPF3-213ENST00000506469 SETD1AO15047 1707 aaKnown RBP20.24■□□□□ 0.83
YIPF3-213ENST00000506469 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.83
YIPF3-213ENST00000506469 USP47Q96K76 1375 aa20.21■□□□□ 0.83
YIPF3-213ENST00000506469 YTHDC2Q9H6S0 1430 aaKnown RBP20.21■□□□□ 0.83
YIPF3-213ENST00000506469 STK26Q9P289 416 aa20.2■□□□□ 0.82
YIPF3-213ENST00000506469 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
YIPF3-213ENST00000506469 TRAK1Q9UPV9 953 aa20.19■□□□□ 0.82
YIPF3-213ENST00000506469 LRPPRCP42704 1394 aaKnown RBP20.19■□□□□ 0.82
YIPF3-213ENST00000506469 STRCQ7RTU9 1775 aa20.19■□□□□ 0.82
YIPF3-213ENST00000506469 PTPRUQ92729 1446 aa20.17■□□□□ 0.82
YIPF3-213ENST00000506469 PIK3R4Q99570 1358 aa20.17■□□□□ 0.82
YIPF3-213ENST00000506469 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
YIPF3-213ENST00000506469 HIRIP3Q9BW71 556 aaPredicted RBP20.16■□□□□ 0.82
YIPF3-213ENST00000506469 EIF3AQ14152 1382 aaKnown RBP20.15■□□□□ 0.82
YIPF3-213ENST00000506469 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
YIPF3-213ENST00000506469 ST20-MTHFSA0A0A6YYL1 179 aa20.14■□□□□ 0.81
YIPF3-213ENST00000506469 DMRT2Q9Y5R5 561 aa20.13■□□□□ 0.81
YIPF3-213ENST00000506469 TECPR2O15040 1411 aa20.13■□□□□ 0.81
YIPF3-213ENST00000506469 DLC1Q96QB1 1528 aa20.12■□□□□ 0.81
YIPF3-213ENST00000506469 KCNA6P17658 529 aa20.1■□□□□ 0.81
YIPF3-213ENST00000506469 PRAM1Q96QH2 718 aa20.1■□□□□ 0.81
YIPF3-213ENST00000506469 CENPJQ9HC77 1338 aaPredicted RBP20.1■□□□□ 0.81
YIPF3-213ENST00000506469 SIRT1Q96EB6 747 aa20.1■□□□□ 0.81
YIPF3-213ENST00000506469 ROBO2Q9HCK4 1378 aa20.09■□□□□ 0.81
YIPF3-213ENST00000506469 CPS1P31327 1500 aa20.09■□□□□ 0.81
YIPF3-213ENST00000506469 POGKQ9P215 609 aa20.09■□□□□ 0.81
YIPF3-213ENST00000506469 FAM135BQ49AJ0 1406 aa20.09■□□□□ 0.81
YIPF3-213ENST00000506469 KNDC1Q76NI1 1749 aa20.08■□□□□ 0.81
YIPF3-213ENST00000506469 XRN1Q8IZH2 1706 aaKnown RBP20.08■□□□□ 0.81
YIPF3-213ENST00000506469 ARHGEF28Q8N1W1 1705 aaKnown RBP20.08■□□□□ 0.81
YIPF3-213ENST00000506469 WAPLQ7Z5K2 1190 aa20.08■□□□□ 0.8
YIPF3-213ENST00000506469 PTCH1Q13635 1447 aa20.07■□□□□ 0.8
YIPF3-213ENST00000506469 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
YIPF3-213ENST00000506469 SAFB2Q14151 953 aaKnown RBP eCLIP20.07■□□□□ 0.8
YIPF3-213ENST00000506469 TESK2Q96S53 571 aa20.07■□□□□ 0.8
YIPF3-213ENST00000506469 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
YIPF3-213ENST00000506469 NWD1Q149M9 1564 aa20.06■□□□□ 0.8
YIPF3-213ENST00000506469 CHD2O14647 1828 aaKnown RBP20.05■□□□□ 0.8
YIPF3-213ENST00000506469 SBNO2Q9Y2G9 1366 aa20.03■□□□□ 0.8
YIPF3-213ENST00000506469 ZNF335Q9H4Z2 1342 aaPredicted RBP20.02■□□□□ 0.8
YIPF3-213ENST00000506469 QRICH2Q9H0J4 1663 aa20.01■□□□□ 0.79
YIPF3-213ENST00000506469 MINK1Q8N4C8 1332 aaPredicted RBP20.01■□□□□ 0.79
YIPF3-213ENST00000506469 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
YIPF3-213ENST00000506469 C11orf95C9JLR9 678 aaPredicted RBP20■□□□□ 0.79
YIPF3-213ENST00000506469 SLC24A1O60721 1099 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms