RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 CFAP65Q6ZU64 1925 aaKnown RBP12.45□□□□□ -0.42
ARHGEF28-207ENST00000506334 IDI1Q13907 227 aa12.44□□□□□ -0.42
ARHGEF28-207ENST00000506334 SLC26A8Q96RN1 970 aa12.43□□□□□ -0.42
ARHGEF28-207ENST00000506334 XIRP1Q702N8 1843 aaKnown RBP12.43□□□□□ -0.42
ARHGEF28-207ENST00000506334 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
ARHGEF28-207ENST00000506334 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
ARHGEF28-207ENST00000506334 MAST1Q9Y2H9 1570 aa12.42□□□□□ -0.42
ARHGEF28-207ENST00000506334 EIF2AK4Q9P2K8 1649 aaKnown RBP12.41□□□□□ -0.42
ARHGEF28-207ENST00000506334 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF28-207ENST00000506334 JCADQ9P266 1359 aa12.41□□□□□ -0.42
ARHGEF28-207ENST00000506334 ZNF772Q68DY9 489 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF28-207ENST00000506334 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
ARHGEF28-207ENST00000506334 DUOX2Q9NRD8 1548 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 BCANQ96GW7 911 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 RRP7BPQ9NSQ0 103 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 MROH1Q8NDA8 1641 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 MSH6P52701 1360 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 MYOM3Q5VTT5 1437 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 HDGFP51858 240 aaKnown RBP12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 SLC52A1Q9NWF4 448 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 KANK1Q14678 1352 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 TET3O43151 1660 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
ARHGEF28-207ENST00000506334 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
ARHGEF28-207ENST00000506334 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF28-207ENST00000506334 CEP152O94986 1710 aa12.36□□□□□ -0.43
ARHGEF28-207ENST00000506334 KIF15Q9NS87 1388 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 RXRBP28702 533 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 KANK4Q5T7N3 995 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 MEX3CQ5U5Q3 659 aaKnown RBP12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 MAP3K1Q13233 1512 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 EFCAB6Q5THR3 1501 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 ERBINQ96RT1 1412 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 TBX22Q9Y458 520 aa12.34□□□□□ -0.43
ARHGEF28-207ENST00000506334 NCOA3Q9Y6Q9 1424 aa12.34□□□□□ -0.43
ARHGEF28-207ENST00000506334 NKTRP30414 1462 aaKnown RBP12.34□□□□□ -0.43
ARHGEF28-207ENST00000506334 PIK3C2BO00750 1634 aa12.33□□□□□ -0.43
ARHGEF28-207ENST00000506334 TRIM52Q96A61 297 aa12.33□□□□□ -0.44
ARHGEF28-207ENST00000506334 KDM5AP29375 1690 aaKnown RBP12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 FGD6Q6ZV73 1430 aa12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 CADPS2Q86UW7 1296 aa12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 ABCC5O15440 1437 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 NOS1P29475 1434 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 ATF3P18847 181 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 C14orf37Q86TY3 774 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 HAX1O00165 279 aa12.29□□□□□ -0.44
ARHGEF28-207ENST00000506334 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF28-207ENST00000506334 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
ARHGEF28-207ENST00000506334 NWD1Q149M9 1564 aa12.28□□□□□ -0.44
ARHGEF28-207ENST00000506334 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
ARHGEF28-207ENST00000506334 ANKRD30AQ9BXX3 1397 aa12.28□□□□□ -0.44
ARHGEF28-207ENST00000506334 SETD1AO15047 1707 aaKnown RBP12.27□□□□□ -0.45
ARHGEF28-207ENST00000506334 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
ARHGEF28-207ENST00000506334 LRP6O75581 1613 aa12.26□□□□□ -0.45
ARHGEF28-207ENST00000506334 COL16A1Q07092 1604 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF28-207ENST00000506334 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 NUTM2BA6NNL0 878 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 NUTM2EB1AL46 878 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 NUTM2AQ8IVF1 878 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 CDK12Q9NYV4 1490 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 ADGRB3O60242 1522 aa12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 ZFYVE9O95405 1425 aa12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 DAPK1P53355 1430 aa12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 QTRT2Q9H974 415 aaKnown RBP12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 PIK3R4Q99570 1358 aa12.23□□□□□ -0.45
ARHGEF28-207ENST00000506334 RBM6P78332 1123 aaKnown RBP12.23□□□□□ -0.45
ARHGEF28-207ENST00000506334 AMOTL2Q9Y2J4 779 aa12.23□□□□□ -0.45
ARHGEF28-207ENST00000506334 AFF2P51816 1311 aa12.22□□□□□ -0.45
ARHGEF28-207ENST00000506334 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
ARHGEF28-207ENST00000506334 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.45
ARHGEF28-207ENST00000506334 AHDC1Q5TGY3 1603 aaPredicted RBP12.21□□□□□ -0.46
ARHGEF28-207ENST00000506334 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
ARHGEF28-207ENST00000506334 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF28-207ENST00000506334 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
ARHGEF28-207ENST00000506334 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 SRCAPQ6ZRS2 3230 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 NGLY1Q96IV0 654 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF28-207ENST00000506334 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
ARHGEF28-207ENST00000506334 CROCC2H7BZ55 1655 aa12.17□□□□□ -0.46
ARHGEF28-207ENST00000506334 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF28-207ENST00000506334 DCCP43146 1447 aa12.16□□□□□ -0.46
ARHGEF28-207ENST00000506334 ANKRD50Q9ULJ7 1429 aa12.16□□□□□ -0.46
ARHGEF28-207ENST00000506334 TMEM131LA2VDJ0 1609 aa12.15□□□□□ -0.46
ARHGEF28-207ENST00000506334 DIP2AQ14689 1571 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms