RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 DDX10Q13206 875 aaKnown RBP8.98□□□□□ -0.97
COPB2-204ENST00000504295 PNISRQ8TF01 805 aaKnown RBP8.98□□□□□ -0.97
COPB2-204ENST00000504295 TESK2Q96S53 571 aa8.98□□□□□ -0.97
COPB2-204ENST00000504295 ZNF644Q9H582 1327 aaPredicted RBP8.98□□□□□ -0.97
COPB2-204ENST00000504295 ZMYM3Q14202 1370 aa8.98□□□□□ -0.97
COPB2-204ENST00000504295 DIP2CQ9Y2E4 1556 aa8.97□□□□□ -0.97
COPB2-204ENST00000504295 DLG5Q8TDM6 1919 aa8.97□□□□□ -0.97
COPB2-204ENST00000504295 LRRC37A3O60309 1634 aa8.96□□□□□ -0.97
COPB2-204ENST00000504295 TRMT2AQ8IZ69 625 aaKnown RBP8.96□□□□□ -0.98
COPB2-204ENST00000504295 C3P01024 1663 aa8.96□□□□□ -0.98
COPB2-204ENST00000504295 ITSN1Q15811 1721 aa8.96□□□□□ -0.98
COPB2-204ENST00000504295 CRYBG1Q9Y4K1 1723 aa8.95□□□□□ -0.98
COPB2-204ENST00000504295 TULP4Q9NRJ4 1543 aa8.95□□□□□ -0.98
COPB2-204ENST00000504295 MED14O60244 1454 aa8.95□□□□□ -0.98
COPB2-204ENST00000504295 KIF15Q9NS87 1388 aa8.95□□□□□ -0.98
COPB2-204ENST00000504295 KDM2BQ8NHM5 1336 aa8.93□□□□□ -0.98
COPB2-204ENST00000504295 YTHDC1Q96MU7 727 aaKnown RBP8.93□□□□□ -0.98
COPB2-204ENST00000504295 DISP3Q9P2K9 1392 aa8.93□□□□□ -0.98
COPB2-204ENST00000504295 FMN2Q9NZ56 1722 aa8.93□□□□□ -0.98
COPB2-204ENST00000504295 KANK1Q14678 1352 aa8.92□□□□□ -0.98
COPB2-204ENST00000504295 LRRC7Q96NW7 1537 aa8.92□□□□□ -0.98
COPB2-204ENST00000504295 P3H3Q8IVL6 736 aa8.92□□□□□ -0.98
COPB2-204ENST00000504295 SCAF11Q99590 1463 aaKnown RBP8.91□□□□□ -0.98
COPB2-204ENST00000504295 EIF4G2P78344 907 aaKnown RBP eCLIP8.91□□□□□ -0.98
COPB2-204ENST00000504295 ARHGAP5Q13017 1502 aa8.91□□□□□ -0.98
COPB2-204ENST00000504295 ARHGAP31Q2M1Z3 1444 aa8.91□□□□□ -0.98
COPB2-204ENST00000504295 MLH3Q9UHC1 1453 aa8.91□□□□□ -0.98
COPB2-204ENST00000504295 TRHP20396 242 aaPredicted RBP8.91□□□□□ -0.98
COPB2-204ENST00000504295 RANGAP1P46060 587 aaPredicted RBP8.91□□□□□ -0.98
COPB2-204ENST00000504295 FAM50AQ14320 339 aaKnown RBP8.9□□□□□ -0.98
COPB2-204ENST00000504295 CDK11AQ9UQ88 783 aaPredicted RBP8.9□□□□□ -0.98
COPB2-204ENST00000504295 NUP155O75694 1391 aa8.9□□□□□ -0.99
COPB2-204ENST00000504295 YEATS2Q9ULM3 1422 aa8.9□□□□□ -0.99
COPB2-204ENST00000504295 PPP4R2Q9NY27 417 aa8.89□□□□□ -0.99
COPB2-204ENST00000504295 ANP32CO43423 234 aa8.89□□□□□ -0.99
COPB2-204ENST00000504295 NOS1P29475 1434 aa8.89□□□□□ -0.99
COPB2-204ENST00000504295 ZFYVE9O95405 1425 aa8.89□□□□□ -0.99
COPB2-204ENST00000504295 TRAPPC8Q9Y2L5 1435 aa8.89□□□□□ -0.99
COPB2-204ENST00000504295 DIP2AQ14689 1571 aa8.89□□□□□ -0.99
COPB2-204ENST00000504295 CD163L1Q9NR16 1453 aa8.89□□□□□ -0.99
COPB2-204ENST00000504295 NCBP3Q53F19 620 aaKnown RBP8.88□□□□□ -0.99
COPB2-204ENST00000504295 DLC1Q96QB1 1528 aa8.88□□□□□ -0.99
COPB2-204ENST00000504295 PHRF1Q9P1Y6 1649 aaKnown RBP8.88□□□□□ -0.99
COPB2-204ENST00000504295 PHF23Q9BUL5 403 aaPredicted RBP8.88□□□□□ -0.99
COPB2-204ENST00000504295 FKBP8Q14318 412 aa8.87□□□□□ -0.99
COPB2-204ENST00000504295 NUDCQ9Y266 331 aa8.87□□□□□ -0.99
COPB2-204ENST00000504295 ARHGEF40Q8TER5 1519 aa8.87□□□□□ -0.99
COPB2-204ENST00000504295 PLEKHD1A6NEE1 506 aa8.87□□□□□ -0.99
COPB2-204ENST00000504295 ASXL2Q76L83 1435 aa8.86□□□□□ -0.99
COPB2-204ENST00000504295 KIF13AQ9H1H9 1805 aa8.85□□□□□ -0.99
COPB2-204ENST00000504295 MYBBP1AQ9BQG0 1328 aaKnown RBP8.85□□□□□ -0.99
COPB2-204ENST00000504295 CAMTA1Q9Y6Y1 1673 aa8.85□□□□□ -0.99
COPB2-204ENST00000504295 FAM69CQ0P6D2 419 aa8.84□□□□□ -0.99
COPB2-204ENST00000504295 RSPH4AQ5TD94 716 aa8.84□□□□□ -0.99
COPB2-204ENST00000504295 SPATA31D1Q6ZQQ2 1576 aa8.84□□□□□ -0.99
COPB2-204ENST00000504295 PTPRMP28827 1452 aa8.84□□□□□ -0.99
COPB2-204ENST00000504295 ATP1B4Q9UN42 357 aaPredicted RBP8.83□□□□□ -1
COPB2-204ENST00000504295 ADAMTS7Q9UKP4 1686 aa8.83□□□□□ -1
COPB2-204ENST00000504295 RRP7BPQ9NSQ0 103 aa8.83□□□□□ -1
COPB2-204ENST00000504295 DIP2BQ9P265 1576 aa8.82□□□□□ -1
COPB2-204ENST00000504295 FAM208AQ9UK61 1670 aaKnown RBP8.82□□□□□ -1
COPB2-204ENST00000504295 AGLP35573 1532 aa8.82□□□□□ -1
COPB2-204ENST00000504295 CPS1P31327 1500 aa8.82□□□□□ -1
COPB2-204ENST00000504295 EIF3AQ14152 1382 aaKnown RBP8.81□□□□□ -1
COPB2-204ENST00000504295 PLEKHH1Q9ULM0 1364 aa8.81□□□□□ -1
COPB2-204ENST00000504295 XRN1Q8IZH2 1706 aaKnown RBP8.81□□□□□ -1
COPB2-204ENST00000504295 POGZQ7Z3K3 1410 aa8.81□□□□□ -1
COPB2-204ENST00000504295 SIPA1L3O60292 1781 aaPredicted RBP8.81□□□□□ -1
COPB2-204ENST00000504295 RALBP1Q15311 655 aa8.8□□□□□ -1
COPB2-204ENST00000504295 NCOA3Q9Y6Q9 1424 aa8.8□□□□□ -1
COPB2-204ENST00000504295 DDX60Q8IY21 1712 aaKnown RBP8.8□□□□□ -1
COPB2-204ENST00000504295 PPIP5K1Q6PFW1 1433 aa8.79□□□□□ -1
COPB2-204ENST00000504295 STAC3Q96MF2 364 aa8.79□□□□□ -1
COPB2-204ENST00000504295 UBR1Q8IWV7 1749 aa8.78□□□□□ -1
COPB2-204ENST00000504295 PDE3BQ13370 1112 aa8.78□□□□□ -1
COPB2-204ENST00000504295 AMER1Q5JTC6 1135 aaPredicted RBP8.78□□□□□ -1
COPB2-204ENST00000504295 FOXD1Q16676 465 aa8.78□□□□□ -1
COPB2-204ENST00000504295 HIRIP3Q9BW71 556 aaPredicted RBP8.78□□□□□ -1
COPB2-204ENST00000504295 PEAK1Q9H792 1746 aa8.77□□□□□ -1
COPB2-204ENST00000504295 POLR3AO14802 1390 aaPredicted RBP8.77□□□□□ -1
COPB2-204ENST00000504295 MAP2P11137 1827 aaKnown RBP8.77□□□□□ -1
COPB2-204ENST00000504295 TRIM52Q96A61 297 aa8.77□□□□□ -1.01
COPB2-204ENST00000504295 CD109Q6YHK3 1445 aa8.77□□□□□ -1.01
COPB2-204ENST00000504295 USP19O94966 1318 aa8.77□□□□□ -1.01
COPB2-204ENST00000504295 NEO1Q92859 1461 aa8.77□□□□□ -1.01
COPB2-204ENST00000504295 MED1Q15648 1581 aaPredicted RBP8.77□□□□□ -1.01
COPB2-204ENST00000504295 MS4A1P11836 297 aa8.76□□□□□ -1.01
COPB2-204ENST00000504295 ARID3CA6NKF2 412 aa8.76□□□□□ -1.01
COPB2-204ENST00000504295 BCL11AQ9H165 835 aa8.76□□□□□ -1.01
COPB2-204ENST00000504295 MYT1LQ9UL68 1186 aa8.76□□□□□ -1.01
COPB2-204ENST00000504295 CACNA1FO60840 1977 aa8.75□□□□□ -1.01
COPB2-204ENST00000504295 PKD2Q13563 968 aa8.74□□□□□ -1.01
COPB2-204ENST00000504295 COL22A1Q8NFW1 1626 aaPredicted RBP8.74□□□□□ -1.01
COPB2-204ENST00000504295 NINLQ9Y2I6 1382 aa8.74□□□□□ -1.01
COPB2-204ENST00000504295 RRP1P56182 461 aaKnown RBP8.74□□□□□ -1.01
COPB2-204ENST00000504295 NPATQ14207 1427 aa8.74□□□□□ -1.01
COPB2-204ENST00000504295 ITGAEP38570 1179 aa8.74□□□□□ -1.01
COPB2-204ENST00000504295 NKTRP30414 1462 aaKnown RBP8.73□□□□□ -1.01
COPB2-204ENST00000504295 PUS7Q96PZ0 661 aaKnown RBP8.73□□□□□ -1.01
COPB2-204ENST00000504295 CHD2O14647 1828 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms