RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 EFCAB2Q5VUJ9 269 aa9.7□□□□□ -0.86
LYSMD3-203ENST00000500869 RRP1P56182 461 aaKnown RBP9.7□□□□□ -0.86
LYSMD3-203ENST00000500869 B4GALNT3Q6L9W6 998 aa9.69□□□□□ -0.86
LYSMD3-203ENST00000500869 HECW2Q9P2P5 1572 aa9.68□□□□□ -0.86
LYSMD3-203ENST00000500869 PIK3C2BO00750 1634 aa9.68□□□□□ -0.86
LYSMD3-203ENST00000500869 ZNF326Q5BKZ1 582 aaKnown RBP9.68□□□□□ -0.86
LYSMD3-203ENST00000500869 NBPF1Q3BBV0 1214 aa9.68□□□□□ -0.86
LYSMD3-203ENST00000500869 TMF1P82094 1093 aa9.67□□□□□ -0.86
LYSMD3-203ENST00000500869 VIRMAQ69YN4 1812 aaKnown RBP9.67□□□□□ -0.86
LYSMD3-203ENST00000500869 SHPRHQ149N8 1683 aa9.67□□□□□ -0.86
LYSMD3-203ENST00000500869 ZNF521Q96K83 1311 aa9.67□□□□□ -0.86
LYSMD3-203ENST00000500869 EIF3AQ14152 1382 aaKnown RBP9.66□□□□□ -0.86
LYSMD3-203ENST00000500869 ZNF518AQ6AHZ1 1483 aa9.66□□□□□ -0.86
LYSMD3-203ENST00000500869 FRMPD1Q5SYB0 1578 aa9.66□□□□□ -0.86
LYSMD3-203ENST00000500869 ERVK-7P63135 1459 aa9.66□□□□□ -0.86
LYSMD3-203ENST00000500869 SLC24A1O60721 1099 aa9.65□□□□□ -0.86
LYSMD3-203ENST00000500869 MS4A1P11836 297 aa9.65□□□□□ -0.86
LYSMD3-203ENST00000500869 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
LYSMD3-203ENST00000500869 RCAN3Q9UKA8 241 aa9.64□□□□□ -0.87
LYSMD3-203ENST00000500869 ADGRB1O14514 1584 aa9.64□□□□□ -0.87
LYSMD3-203ENST00000500869 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
LYSMD3-203ENST00000500869 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
LYSMD3-203ENST00000500869 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
LYSMD3-203ENST00000500869 ADGRL1O94910 1474 aa9.63□□□□□ -0.87
LYSMD3-203ENST00000500869 MLH3Q9UHC1 1453 aa9.63□□□□□ -0.87
LYSMD3-203ENST00000500869 SPAG9O60271 1321 aaKnown RBP9.63□□□□□ -0.87
LYSMD3-203ENST00000500869 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
LYSMD3-203ENST00000500869 KANK1Q14678 1352 aa9.63□□□□□ -0.87
LYSMD3-203ENST00000500869 CCDC136Q96JN2 1154 aa9.63□□□□□ -0.87
LYSMD3-203ENST00000500869 CAMSAP1Q5T5Y3 1602 aa9.62□□□□□ -0.87
LYSMD3-203ENST00000500869 PANK3Q9H999 370 aa9.62□□□□□ -0.87
LYSMD3-203ENST00000500869 TRMT2AQ8IZ69 625 aaKnown RBP9.61□□□□□ -0.87
LYSMD3-203ENST00000500869 NGEFQ8N5V2 710 aa9.61□□□□□ -0.87
LYSMD3-203ENST00000500869 ARHGEF28Q8N1W1 1705 aaKnown RBP9.61□□□□□ -0.87
LYSMD3-203ENST00000500869 CLTCQ00610 1675 aaKnown RBP9.6□□□□□ -0.87
LYSMD3-203ENST00000500869 IQSEC2Q5JU85 1478 aa9.6□□□□□ -0.87
LYSMD3-203ENST00000500869 ANKRD26Q9UPS8 1709 aa9.6□□□□□ -0.87
LYSMD3-203ENST00000500869 NOP58Q9Y2X3 529 aaKnown RBP9.6□□□□□ -0.87
LYSMD3-203ENST00000500869 POGZQ7Z3K3 1410 aa9.6□□□□□ -0.87
LYSMD3-203ENST00000500869 SIGLEC1Q9BZZ2 1709 aa9.59□□□□□ -0.87
LYSMD3-203ENST00000500869 UGGT1Q9NYU2 1555 aa9.59□□□□□ -0.87
LYSMD3-203ENST00000500869 PPP2R1AP30153 589 aa9.59□□□□□ -0.87
LYSMD3-203ENST00000500869 KDM2BQ8NHM5 1336 aa9.59□□□□□ -0.87
LYSMD3-203ENST00000500869 ABCC3O15438 1527 aa9.59□□□□□ -0.87
LYSMD3-203ENST00000500869 IPO9Q96P70 1041 aaKnown RBP9.59□□□□□ -0.87
LYSMD3-203ENST00000500869 PLEKHH1Q9ULM0 1364 aa9.59□□□□□ -0.87
LYSMD3-203ENST00000500869 NCBP3Q53F19 620 aaKnown RBP9.58□□□□□ -0.88
LYSMD3-203ENST00000500869 ADGRB2O60241 1585 aa9.58□□□□□ -0.88
LYSMD3-203ENST00000500869 ASXL2Q76L83 1435 aa9.58□□□□□ -0.88
LYSMD3-203ENST00000500869 POLR3GLQ9BT43 218 aa9.58□□□□□ -0.88
LYSMD3-203ENST00000500869 POLR3AO14802 1390 aaPredicted RBP9.58□□□□□ -0.88
LYSMD3-203ENST00000500869 NINLQ9Y2I6 1382 aa9.58□□□□□ -0.88
LYSMD3-203ENST00000500869 EXOC6Q8TAG9 804 aa9.57□□□□□ -0.88
LYSMD3-203ENST00000500869 PUS7Q96PZ0 661 aaKnown RBP9.57□□□□□ -0.88
LYSMD3-203ENST00000500869 NOS1P29475 1434 aa9.57□□□□□ -0.88
LYSMD3-203ENST00000500869 RGL3Q3MIN7 710 aa9.57□□□□□ -0.88
LYSMD3-203ENST00000500869 NEXMIFQ5QGS0 1516 aa9.57□□□□□ -0.88
LYSMD3-203ENST00000500869 GLI2P10070 1586 aa9.57□□□□□ -0.88
LYSMD3-203ENST00000500869 RICTORQ6R327 1708 aa9.57□□□□□ -0.88
LYSMD3-203ENST00000500869 ARHGAP31Q2M1Z3 1444 aa9.56□□□□□ -0.88
LYSMD3-203ENST00000500869 NEO1Q92859 1461 aa9.56□□□□□ -0.88
LYSMD3-203ENST00000500869 DUSP27Q5VZP5 1158 aa9.56□□□□□ -0.88
LYSMD3-203ENST00000500869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.56□□□□□ -0.88
LYSMD3-203ENST00000500869 ZFYVE9O95405 1425 aa9.56□□□□□ -0.88
LYSMD3-203ENST00000500869 DIP2CQ9Y2E4 1556 aa9.55□□□□□ -0.88
LYSMD3-203ENST00000500869 NKTRP30414 1462 aaKnown RBP9.55□□□□□ -0.88
LYSMD3-203ENST00000500869 BACH2Q9BYV9 841 aa9.55□□□□□ -0.88
LYSMD3-203ENST00000500869 ZMYM3Q14202 1370 aa9.55□□□□□ -0.88
LYSMD3-203ENST00000500869 ANP32AP39687 249 aaKnown RBP9.54□□□□□ -0.88
LYSMD3-203ENST00000500869 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
LYSMD3-203ENST00000500869 NPATQ14207 1427 aa9.54□□□□□ -0.88
LYSMD3-203ENST00000500869 CDCA7LQ96GN5 454 aa9.54□□□□□ -0.88
LYSMD3-203ENST00000500869 RPGRIP1LQ68CZ1 1315 aa9.54□□□□□ -0.88
LYSMD3-203ENST00000500869 KNSTRNQ9Y448 316 aa9.54□□□□□ -0.88
LYSMD3-203ENST00000500869 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
LYSMD3-203ENST00000500869 SLFN5Q08AF3 891 aa9.53□□□□□ -0.88
LYSMD3-203ENST00000500869 CC2D1BQ5T0F9 858 aaKnown RBP9.53□□□□□ -0.88
LYSMD3-203ENST00000500869 REREQ9P2R6 1566 aa9.53□□□□□ -0.88
LYSMD3-203ENST00000500869 TULP4Q9NRJ4 1543 aa9.53□□□□□ -0.88
LYSMD3-203ENST00000500869 AFAP1Q8N556 730 aa9.53□□□□□ -0.88
LYSMD3-203ENST00000500869 MED14O60244 1454 aa9.52□□□□□ -0.89
LYSMD3-203ENST00000500869 NSD2O96028 1365 aa9.52□□□□□ -0.89
LYSMD3-203ENST00000500869 PREX1Q8TCU6 1659 aa9.51□□□□□ -0.89
LYSMD3-203ENST00000500869 PAK3O75914 559 aaPredicted RBP9.51□□□□□ -0.89
LYSMD3-203ENST00000500869 PDE4AP27815 886 aa9.51□□□□□ -0.89
LYSMD3-203ENST00000500869 CDC42BPGQ6DT37 1551 aa9.51□□□□□ -0.89
LYSMD3-203ENST00000500869 CENPQQ7L2Z9 268 aaPredicted RBP9.51□□□□□ -0.89
LYSMD3-203ENST00000500869 PHF23Q9BUL5 403 aaPredicted RBP9.51□□□□□ -0.89
LYSMD3-203ENST00000500869 TMEM131LA2VDJ0 1609 aa9.5□□□□□ -0.89
LYSMD3-203ENST00000500869 GOLGA2Q08379 1002 aa9.5□□□□□ -0.89
LYSMD3-203ENST00000500869 CRBNQ96SW2 442 aa9.5□□□□□ -0.89
LYSMD3-203ENST00000500869 BCL11AQ9H165 835 aa9.5□□□□□ -0.89
LYSMD3-203ENST00000500869 ADGRF5Q8IZF2 1346 aa9.49□□□□□ -0.89
LYSMD3-203ENST00000500869 WDR43Q15061 677 aaKnown RBP eCLIP9.49□□□□□ -0.89
LYSMD3-203ENST00000500869 C14orf93Q9H972 538 aaKnown RBP9.49□□□□□ -0.89
LYSMD3-203ENST00000500869 SETD1AO15047 1707 aaKnown RBP9.48□□□□□ -0.89
LYSMD3-203ENST00000500869 AAMPQ13685 434 aa9.48□□□□□ -0.89
LYSMD3-203ENST00000500869 USP35Q9P2H5 1018 aa9.48□□□□□ -0.89
LYSMD3-203ENST00000500869 COL3A1P02461 1466 aaPredicted RBP9.48□□□□□ -0.89
LYSMD3-203ENST00000500869 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms