RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-215ENST00000498528 NWD1Q149M9 1564 aa9.49□□□□□ -0.89
KDM3A-215ENST00000498528 MYO5BQ9ULV0 1848 aa9.49□□□□□ -0.89
KDM3A-215ENST00000498528 LRP6O75581 1613 aa9.49□□□□□ -0.89
KDM3A-215ENST00000498528 COL16A1Q07092 1604 aaPredicted RBP9.49□□□□□ -0.89
KDM3A-215ENST00000498528 SRCAPQ6ZRS2 3230 aa9.48□□□□□ -0.89
KDM3A-215ENST00000498528 ERBINQ96RT1 1412 aa9.48□□□□□ -0.89
KDM3A-215ENST00000498528 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
KDM3A-215ENST00000498528 ZNF772Q68DY9 489 aaPredicted RBP9.48□□□□□ -0.89
KDM3A-215ENST00000498528 KDM5AP29375 1690 aaKnown RBP9.48□□□□□ -0.89
KDM3A-215ENST00000498528 CHD2O14647 1828 aaKnown RBP9.47□□□□□ -0.89
KDM3A-215ENST00000498528 ABCC5O15440 1437 aa9.47□□□□□ -0.89
KDM3A-215ENST00000498528 PTPN23Q9H3S7 1636 aa9.46□□□□□ -0.89
KDM3A-215ENST00000498528 GCC2Q8IWJ2 1684 aa9.46□□□□□ -0.89
KDM3A-215ENST00000498528 ATF3P18847 181 aa9.46□□□□□ -0.9
KDM3A-215ENST00000498528 RXRBP28702 533 aa9.46□□□□□ -0.9
KDM3A-215ENST00000498528 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
KDM3A-215ENST00000498528 SPATA31A6Q5VVP1 1343 aa9.46□□□□□ -0.9
KDM3A-215ENST00000498528 VPS8Q8N3P4 1428 aa9.46□□□□□ -0.9
KDM3A-215ENST00000498528 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
KDM3A-215ENST00000498528 DAPK1P53355 1430 aa9.44□□□□□ -0.9
KDM3A-215ENST00000498528 RIMS2Q9UQ26 1411 aa9.44□□□□□ -0.9
KDM3A-215ENST00000498528 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.44□□□□□ -0.9
KDM3A-215ENST00000498528 ANKRD30AQ9BXX3 1397 aa9.43□□□□□ -0.9
KDM3A-215ENST00000498528 LMTK2Q8IWU2 1503 aa9.42□□□□□ -0.9
KDM3A-215ENST00000498528 NOS1P29475 1434 aa9.42□□□□□ -0.9
KDM3A-215ENST00000498528 FGD6Q6ZV73 1430 aa9.42□□□□□ -0.9
KDM3A-215ENST00000498528 PLEKHG1Q9ULL1 1385 aa9.42□□□□□ -0.9
KDM3A-215ENST00000498528 AFF2P51816 1311 aa9.42□□□□□ -0.9
KDM3A-215ENST00000498528 HDGFP51858 240 aaKnown RBP9.42□□□□□ -0.9
KDM3A-215ENST00000498528 APLP2Q06481 763 aa9.42□□□□□ -0.9
KDM3A-215ENST00000498528 CADPS2Q86UW7 1296 aa9.42□□□□□ -0.9
KDM3A-215ENST00000498528 SLC52A1Q9NWF4 448 aa9.42□□□□□ -0.9
KDM3A-215ENST00000498528 AHDC1Q5TGY3 1603 aaPredicted RBP9.42□□□□□ -0.9
KDM3A-215ENST00000498528 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
KDM3A-215ENST00000498528 C8orf37Q96NL8 207 aa9.41□□□□□ -0.9
KDM3A-215ENST00000498528 ZFYVE9O95405 1425 aa9.4□□□□□ -0.9
KDM3A-215ENST00000498528 C19orf44Q9H6X5 657 aa9.4□□□□□ -0.9
KDM3A-215ENST00000498528 TMEM131LA2VDJ0 1609 aa9.39□□□□□ -0.91
KDM3A-215ENST00000498528 FAM50AQ14320 339 aaKnown RBP9.39□□□□□ -0.91
KDM3A-215ENST00000498528 BRINP3Q76B58 766 aa9.39□□□□□ -0.91
KDM3A-215ENST00000498528 TBX22Q9Y458 520 aa9.39□□□□□ -0.91
KDM3A-215ENST00000498528 ADAMTS2O95450 1211 aa9.38□□□□□ -0.91
KDM3A-215ENST00000498528 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
KDM3A-215ENST00000498528 AMOTL2Q9Y2J4 779 aa9.38□□□□□ -0.91
KDM3A-215ENST00000498528 RGS12O14924 1447 aa9.38□□□□□ -0.91
KDM3A-215ENST00000498528 DIP2AQ14689 1571 aa9.37□□□□□ -0.91
KDM3A-215ENST00000498528 ASXL1Q8IXJ9 1541 aa9.37□□□□□ -0.91
KDM3A-215ENST00000498528 CDK12Q9NYV4 1490 aaPredicted RBP9.37□□□□□ -0.91
KDM3A-215ENST00000498528 DDX17Q92841 729 aaKnown RBP9.37□□□□□ -0.91
KDM3A-215ENST00000498528 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
KDM3A-215ENST00000498528 NCOA3Q9Y6Q9 1424 aa9.37□□□□□ -0.91
KDM3A-215ENST00000498528 TRPM2O94759 1503 aa9.36□□□□□ -0.91
KDM3A-215ENST00000498528 RPRD2Q5VT52 1461 aaKnown RBP9.36□□□□□ -0.91
KDM3A-215ENST00000498528 RBM6P78332 1123 aaKnown RBP9.36□□□□□ -0.91
KDM3A-215ENST00000498528 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
KDM3A-215ENST00000498528 ADAMTS13Q76LX8 1427 aa9.36□□□□□ -0.91
KDM3A-215ENST00000498528 LRRC59Q96AG4 307 aaKnown RBP9.35□□□□□ -0.91
KDM3A-215ENST00000498528 ANKRD50Q9ULJ7 1429 aa9.35□□□□□ -0.91
KDM3A-215ENST00000498528 NHSL1Q5SYE7 1610 aa9.34□□□□□ -0.91
KDM3A-215ENST00000498528 PTPRUQ92729 1446 aa9.34□□□□□ -0.91
KDM3A-215ENST00000498528 EP400Q96L91 3159 aa9.34□□□□□ -0.91
KDM3A-215ENST00000498528 E9PCH4 1651 aa9.34□□□□□ -0.91
KDM3A-215ENST00000498528 ZNF326Q5BKZ1 582 aaKnown RBP9.33□□□□□ -0.92
KDM3A-215ENST00000498528 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
KDM3A-215ENST00000498528 ATAD2Q6PL18 1390 aa9.33□□□□□ -0.92
KDM3A-215ENST00000498528 PIK3R4Q99570 1358 aa9.33□□□□□ -0.92
KDM3A-215ENST00000498528 UNC13BO14795 1591 aa9.33□□□□□ -0.92
KDM3A-215ENST00000498528 MST1RQ04912 1400 aa9.32□□□□□ -0.92
KDM3A-215ENST00000498528 SETD5Q9C0A6 1442 aa9.32□□□□□ -0.92
KDM3A-215ENST00000498528 PNPLA6Q8IY17 1366 aa9.32□□□□□ -0.92
KDM3A-215ENST00000498528 ADGRL2O95490 1459 aa9.32□□□□□ -0.92
KDM3A-215ENST00000498528 DCCP43146 1447 aa9.31□□□□□ -0.92
KDM3A-215ENST00000498528 FOXD1Q16676 465 aa9.31□□□□□ -0.92
KDM3A-215ENST00000498528 USP21Q9UK80 565 aa9.31□□□□□ -0.92
KDM3A-215ENST00000498528 NALCNQ8IZF0 1738 aa9.31□□□□□ -0.92
KDM3A-215ENST00000498528 XRN1Q8IZH2 1706 aaKnown RBP9.31□□□□□ -0.92
KDM3A-215ENST00000498528 SETBP1Q9Y6X0 1596 aa9.29□□□□□ -0.92
KDM3A-215ENST00000498528 ITGAEP38570 1179 aa9.29□□□□□ -0.92
KDM3A-215ENST00000498528 METP08581 1390 aa9.28□□□□□ -0.92
KDM3A-215ENST00000498528 NRXN3Q9Y4C0 1643 aa9.28□□□□□ -0.92
KDM3A-215ENST00000498528 TRPC5Q9UL62 973 aaPredicted RBP9.28□□□□□ -0.92
KDM3A-215ENST00000498528 ADGRL3Q9HAR2 1447 aa9.28□□□□□ -0.92
KDM3A-215ENST00000498528 IQGAP3Q86VI3 1631 aa9.27□□□□□ -0.92
KDM3A-215ENST00000498528 NUP155O75694 1391 aa9.27□□□□□ -0.93
KDM3A-215ENST00000498528 SPHKAPQ2M3C7 1700 aa9.26□□□□□ -0.93
KDM3A-215ENST00000498528 ORAI2Q96SN7 254 aa9.26□□□□□ -0.93
KDM3A-215ENST00000498528 C1orf167Q5SNV9 1468 aa9.25□□□□□ -0.93
KDM3A-215ENST00000498528 XPCQ01831 940 aaPredicted RBP9.24□□□□□ -0.93
KDM3A-215ENST00000498528 ATRNO75882 1429 aa9.23□□□□□ -0.93
KDM3A-215ENST00000498528 PTCH1Q13635 1447 aa9.23□□□□□ -0.93
KDM3A-215ENST00000498528 PLEKHG5O94827 1062 aa9.23□□□□□ -0.93
KDM3A-215ENST00000498528 ESCO1Q5FWF5 840 aa9.22□□□□□ -0.93
KDM3A-215ENST00000498528 FNBP4Q8N3X1 1017 aaPredicted RBP9.22□□□□□ -0.93
KDM3A-215ENST00000498528 SOS2Q07890 1332 aaPredicted RBP9.22□□□□□ -0.93
KDM3A-215ENST00000498528 MARF1Q9Y4F3 1742 aaKnown RBP9.22□□□□□ -0.93
KDM3A-215ENST00000498528 KIF1BO60333 1816 aa9.21□□□□□ -0.93
KDM3A-215ENST00000498528 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
KDM3A-215ENST00000498528 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.94
KDM3A-215ENST00000498528 DEFB132Q7Z7B7 95 aa9.21□□□□□ -0.94
KDM3A-215ENST00000498528 CCDC125Q86Z20 511 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms