RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 ADGRB3O60242 1522 aa15.02□□□□□ -0.01
USP13-205ENST00000497380 A2ML1A8K2U0 1454 aa15.01□□□□□ -0.01
USP13-205ENST00000497380 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.01□□□□□ -0.01
USP13-205ENST00000497380 VGFO15240 615 aaPredicted RBP15□□□□□ -0.01
USP13-205ENST00000497380 TMEM131LA2VDJ0 1609 aa14.99□□□□□ -0.01
USP13-205ENST00000497380 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
USP13-205ENST00000497380 MYO3AQ8NEV4 1616 aa14.99□□□□□ -0.01
USP13-205ENST00000497380 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
USP13-205ENST00000497380 EID1Q9Y6B2 187 aa14.98□□□□□ -0.01
USP13-205ENST00000497380 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
USP13-205ENST00000497380 UBR1Q8IWV7 1749 aa14.96□□□□□ -0.01
USP13-205ENST00000497380 TMEM2Q9UHN6 1383 aa14.96□□□□□ -0.02
USP13-205ENST00000497380 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
USP13-205ENST00000497380 ZNF142P52746 1687 aaPredicted RBP14.95□□□□□ -0.02
USP13-205ENST00000497380 RIMS2Q9UQ26 1411 aa14.94□□□□□ -0.02
USP13-205ENST00000497380 MYOM2P54296 1465 aa14.94□□□□□ -0.02
USP13-205ENST00000497380 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
USP13-205ENST00000497380 ANKLE2Q86XL3 938 aa14.92□□□□□ -0.02
USP13-205ENST00000497380 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
USP13-205ENST00000497380 MYO5BQ9ULV0 1848 aa14.92□□□□□ -0.02
USP13-205ENST00000497380 SLIT1O75093 1534 aa14.92□□□□□ -0.02
USP13-205ENST00000497380 NEXMIFQ5QGS0 1516 aa14.92□□□□□ -0.02
USP13-205ENST00000497380 PPLO60437 1756 aa14.91□□□□□ -0.02
USP13-205ENST00000497380 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
USP13-205ENST00000497380 ARHGAP23Q9P227 1491 aa14.9□□□□□ -0.02
USP13-205ENST00000497380 IFT172Q9UG01 1749 aa14.89□□□□□ -0.03
USP13-205ENST00000497380 BCANQ96GW7 911 aa14.89□□□□□ -0.03
USP13-205ENST00000497380 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
USP13-205ENST00000497380 PRAG1Q86YV5 1406 aa14.89□□□□□ -0.03
USP13-205ENST00000497380 ADGRF5Q8IZF2 1346 aa14.89□□□□□ -0.03
USP13-205ENST00000497380 NUTM2DQ5VT03 806 aaPredicted RBP14.88□□□□□ -0.03
USP13-205ENST00000497380 NRXN1Q9ULB1 1477 aa14.88□□□□□ -0.03
USP13-205ENST00000497380 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
USP13-205ENST00000497380 SCAF11Q99590 1463 aaKnown RBP14.87□□□□□ -0.03
USP13-205ENST00000497380 PLEKHG1Q9ULL1 1385 aa14.86□□□□□ -0.03
USP13-205ENST00000497380 LTKP29376 864 aa14.86□□□□□ -0.03
USP13-205ENST00000497380 PIK3C2GO75747 1445 aa14.85□□□□□ -0.03
USP13-205ENST00000497380 C14orf93Q9H972 538 aaKnown RBP14.85□□□□□ -0.03
USP13-205ENST00000497380 ROCK2O75116 1388 aaKnown RBP14.83□□□□□ -0.04
USP13-205ENST00000497380 KIAA1210Q9ULL0 1709 aa14.83□□□□□ -0.04
USP13-205ENST00000497380 IQSEC2Q5JU85 1478 aa14.82□□□□□ -0.04
USP13-205ENST00000497380 RALGAPBQ86X10 1494 aa14.82□□□□□ -0.04
USP13-205ENST00000497380 LAMC1P11047 1609 aa14.82□□□□□ -0.04
USP13-205ENST00000497380 CFAP70Q5T0N1 1121 aa14.82□□□□□ -0.04
USP13-205ENST00000497380 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
USP13-205ENST00000497380 TBX22Q9Y458 520 aa14.81□□□□□ -0.04
USP13-205ENST00000497380 SETBP1Q9Y6X0 1596 aa14.81□□□□□ -0.04
USP13-205ENST00000497380 MED14O60244 1454 aa14.8□□□□□ -0.04
USP13-205ENST00000497380 TRPM1Q7Z4N2 1603 aa14.8□□□□□ -0.04
USP13-205ENST00000497380 NPHP4O75161 1426 aaPredicted RBP14.79□□□□□ -0.04
USP13-205ENST00000497380 GPRASP1Q5JY77 1395 aa14.79□□□□□ -0.04
USP13-205ENST00000497380 NCKAP5LQ9HCH0 1330 aa14.79□□□□□ -0.04
USP13-205ENST00000497380 STRCQ7RTU9 1775 aa14.78□□□□□ -0.04
USP13-205ENST00000497380 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
USP13-205ENST00000497380 ALKQ9UM73 1620 aa14.78□□□□□ -0.04
USP13-205ENST00000497380 NBPF1Q3BBV0 1214 aa14.78□□□□□ -0.04
USP13-205ENST00000497380 DIP2AQ14689 1571 aa14.77□□□□□ -0.04
USP13-205ENST00000497380 EIF4G2P78344 907 aaKnown RBP eCLIP14.77□□□□□ -0.05
USP13-205ENST00000497380 SLC26A8Q96RN1 970 aa14.77□□□□□ -0.05
USP13-205ENST00000497380 PIK3R4Q99570 1358 aa14.76□□□□□ -0.05
USP13-205ENST00000497380 SLC24A1O60721 1099 aa14.76□□□□□ -0.05
USP13-205ENST00000497380 ADAMTS13Q76LX8 1427 aa14.75□□□□□ -0.05
USP13-205ENST00000497380 TMEM132EQ6IEE7 984 aa14.75□□□□□ -0.05
USP13-205ENST00000497380 EIF3AQ14152 1382 aaKnown RBP14.74□□□□□ -0.05
USP13-205ENST00000497380 LTBP4Q8N2S1 1624 aa14.74□□□□□ -0.05
USP13-205ENST00000497380 IQGAP1P46940 1657 aa14.74□□□□□ -0.05
USP13-205ENST00000497380 NRXN3Q9Y4C0 1643 aa14.74□□□□□ -0.05
USP13-205ENST00000497380 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
USP13-205ENST00000497380 ADGRB1O14514 1584 aa14.72□□□□□ -0.05
USP13-205ENST00000497380 METP08581 1390 aa14.72□□□□□ -0.05
USP13-205ENST00000497380 LRPPRCP42704 1394 aaKnown RBP14.72□□□□□ -0.05
USP13-205ENST00000497380 ABCC11Q96J66 1382 aa14.72□□□□□ -0.05
USP13-205ENST00000497380 USP47Q96K76 1375 aa14.72□□□□□ -0.05
USP13-205ENST00000497380 SIRT1Q96EB6 747 aa14.71□□□□□ -0.05
USP13-205ENST00000497380 TRAK1Q9UPV9 953 aa14.71□□□□□ -0.05
USP13-205ENST00000497380 STK26Q9P289 416 aa14.7□□□□□ -0.06
USP13-205ENST00000497380 SETD1AO15047 1707 aaKnown RBP14.69□□□□□ -0.06
USP13-205ENST00000497380 HSPA5P11021 654 aaKnown RBP14.69□□□□□ -0.06
USP13-205ENST00000497380 AMOTL2Q9Y2J4 779 aa14.69□□□□□ -0.06
USP13-205ENST00000497380 KCNA6P17658 529 aa14.68□□□□□ -0.06
USP13-205ENST00000497380 POGKQ9P215 609 aa14.68□□□□□ -0.06
USP13-205ENST00000497380 ASXL1Q8IXJ9 1541 aa14.67□□□□□ -0.06
USP13-205ENST00000497380 DLC1Q96QB1 1528 aa14.67□□□□□ -0.06
USP13-205ENST00000497380 ST20-MTHFSA0A0A6YYL1 179 aa14.67□□□□□ -0.06
USP13-205ENST00000497380 CENPJQ9HC77 1338 aaPredicted RBP14.66□□□□□ -0.06
USP13-205ENST00000497380 TECPR2O15040 1411 aa14.66□□□□□ -0.06
USP13-205ENST00000497380 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
USP13-205ENST00000497380 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
USP13-205ENST00000497380 UBAP1LF5GYI3 381 aa14.64□□□□□ -0.07
USP13-205ENST00000497380 PRAM1Q96QH2 718 aa14.64□□□□□ -0.07
USP13-205ENST00000497380 PTCH1Q13635 1447 aa14.64□□□□□ -0.07
USP13-205ENST00000497380 PTPRUQ92729 1446 aa14.64□□□□□ -0.07
USP13-205ENST00000497380 CHD2O14647 1828 aaKnown RBP14.64□□□□□ -0.07
USP13-205ENST00000497380 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
USP13-205ENST00000497380 SBNO2Q9Y2G9 1366 aa14.63□□□□□ -0.07
USP13-205ENST00000497380 TMF1P82094 1093 aa14.63□□□□□ -0.07
USP13-205ENST00000497380 CDCA8Q53HL2 280 aa14.63□□□□□ -0.07
USP13-205ENST00000497380 CPS1P31327 1500 aa14.62□□□□□ -0.07
USP13-205ENST00000497380 NKTRP30414 1462 aaKnown RBP14.61□□□□□ -0.07
USP13-205ENST00000497380 ARHGEF28Q8N1W1 1705 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms