RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 TRIM52Q96A61 297 aa17.76■□□□□ 0.43
APTX-233ENST00000496030 SLIT1O75093 1534 aa17.75■□□□□ 0.43
APTX-233ENST00000496030 E9PCH4 1651 aa17.74■□□□□ 0.43
APTX-233ENST00000496030 TXNDC2Q86VQ3 553 aa17.74■□□□□ 0.43
APTX-233ENST00000496030 NOS1P29475 1434 aa17.73■□□□□ 0.43
APTX-233ENST00000496030 TMEM94Q12767 1356 aa17.73■□□□□ 0.43
APTX-233ENST00000496030 RPRD2Q5VT52 1461 aaKnown RBP17.73■□□□□ 0.43
APTX-233ENST00000496030 RBM33Q96EV2 1170 aaKnown RBP17.72■□□□□ 0.43
APTX-233ENST00000496030 ACIN1Q9UKV3 1341 aaKnown RBP17.71■□□□□ 0.42
APTX-233ENST00000496030 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
APTX-233ENST00000496030 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
APTX-233ENST00000496030 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
APTX-233ENST00000496030 UPF1Q92900 1129 aaKnown RBP eCLIP17.69■□□□□ 0.42
APTX-233ENST00000496030 PIK3C2BO00750 1634 aa17.68■□□□□ 0.42
APTX-233ENST00000496030 SRCAPQ6ZRS2 3230 aa17.67■□□□□ 0.42
APTX-233ENST00000496030 IDI1Q13907 227 aa17.65■□□□□ 0.42
APTX-233ENST00000496030 LRP6O75581 1613 aa17.65■□□□□ 0.42
APTX-233ENST00000496030 FOXD1Q16676 465 aa17.64■□□□□ 0.41
APTX-233ENST00000496030 PROSER2Q86WR7 435 aaPredicted RBP17.64■□□□□ 0.41
APTX-233ENST00000496030 EID1Q9Y6B2 187 aa17.64■□□□□ 0.41
APTX-233ENST00000496030 TMEM2Q9UHN6 1383 aa17.64■□□□□ 0.41
APTX-233ENST00000496030 COL16A1Q07092 1604 aaPredicted RBP17.63■□□□□ 0.41
APTX-233ENST00000496030 KCNA6P17658 529 aa17.63■□□□□ 0.41
APTX-233ENST00000496030 JCADQ9P266 1359 aa17.63■□□□□ 0.41
APTX-233ENST00000496030 SLC52A1Q9NWF4 448 aa17.62■□□□□ 0.41
APTX-233ENST00000496030 SPHKAPQ2M3C7 1700 aa17.61■□□□□ 0.41
APTX-233ENST00000496030 SLC26A8Q96RN1 970 aa17.61■□□□□ 0.41
APTX-233ENST00000496030 PCGF6Q9BYE7 350 aa17.61■□□□□ 0.41
APTX-233ENST00000496030 NWD1Q149M9 1564 aa17.61■□□□□ 0.41
APTX-233ENST00000496030 SLAIN2Q9P270 581 aa17.59■□□□□ 0.41
APTX-233ENST00000496030 TRPM2O94759 1503 aa17.58■□□□□ 0.41
APTX-233ENST00000496030 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.41
APTX-233ENST00000496030 MSH6P52701 1360 aa17.56■□□□□ 0.4
APTX-233ENST00000496030 KDM5AP29375 1690 aaKnown RBP17.56■□□□□ 0.4
APTX-233ENST00000496030 CLTCL1P53675 1640 aa17.55■□□□□ 0.4
APTX-233ENST00000496030 TMEM131LA2VDJ0 1609 aa17.54■□□□□ 0.4
APTX-233ENST00000496030 ANKRD30BQ9BXX2 1392 aa17.54■□□□□ 0.4
APTX-233ENST00000496030 STAG3Q9UJ98 1225 aa17.54■□□□□ 0.4
APTX-233ENST00000496030 ADGRB3O60242 1522 aa17.53■□□□□ 0.4
APTX-233ENST00000496030 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
APTX-233ENST00000496030 MYO5BQ9ULV0 1848 aa17.53■□□□□ 0.4
APTX-233ENST00000496030 SPATA31A6Q5VVP1 1343 aa17.52■□□□□ 0.4
APTX-233ENST00000496030 SHPRHQ149N8 1683 aa17.52■□□□□ 0.4
APTX-233ENST00000496030 MEX3CQ5U5Q3 659 aaKnown RBP17.52■□□□□ 0.4
APTX-233ENST00000496030 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
APTX-233ENST00000496030 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
APTX-233ENST00000496030 RXRBP28702 533 aa17.49■□□□□ 0.39
APTX-233ENST00000496030 AHDC1Q5TGY3 1603 aaPredicted RBP17.48■□□□□ 0.39
APTX-233ENST00000496030 CDK12Q9NYV4 1490 aaPredicted RBP17.48■□□□□ 0.39
APTX-233ENST00000496030 CCDC144AA2RUR9 1427 aa17.47■□□□□ 0.39
APTX-233ENST00000496030 CHGAP10645 457 aaKnown RBP17.47■□□□□ 0.39
APTX-233ENST00000496030 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
APTX-233ENST00000496030 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
APTX-233ENST00000496030 KIF1BO60333 1816 aa17.46■□□□□ 0.39
APTX-233ENST00000496030 DIP2AQ14689 1571 aa17.45■□□□□ 0.38
APTX-233ENST00000496030 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.45■□□□□ 0.38
APTX-233ENST00000496030 BCANQ96GW7 911 aa17.44■□□□□ 0.38
APTX-233ENST00000496030 RIMS2Q9UQ26 1411 aa17.44■□□□□ 0.38
APTX-233ENST00000496030 NUTM2BA6NNL0 878 aaPredicted RBP17.43■□□□□ 0.38
APTX-233ENST00000496030 NUTM2EB1AL46 878 aaPredicted RBP17.43■□□□□ 0.38
APTX-233ENST00000496030 NUTM2AQ8IVF1 878 aaPredicted RBP17.43■□□□□ 0.38
APTX-233ENST00000496030 RGS12O14924 1447 aa17.42■□□□□ 0.38
APTX-233ENST00000496030 AFF2P51816 1311 aa17.42■□□□□ 0.38
APTX-233ENST00000496030 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
APTX-233ENST00000496030 NEXMIFQ5QGS0 1516 aa17.4■□□□□ 0.38
APTX-233ENST00000496030 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
APTX-233ENST00000496030 ZNF326Q5BKZ1 582 aaKnown RBP17.39■□□□□ 0.37
APTX-233ENST00000496030 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.37
APTX-233ENST00000496030 NCOA3Q9Y6Q9 1424 aa17.38■□□□□ 0.37
APTX-233ENST00000496030 RGL3Q3MIN7 710 aa17.38■□□□□ 0.37
APTX-233ENST00000496030 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
APTX-233ENST00000496030 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.38■□□□□ 0.37
APTX-233ENST00000496030 HDGFP51858 240 aaKnown RBP17.37■□□□□ 0.37
APTX-233ENST00000496030 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
APTX-233ENST00000496030 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
APTX-233ENST00000496030 PPLO60437 1756 aa17.35■□□□□ 0.37
APTX-233ENST00000496030 CADPS2Q86UW7 1296 aa17.35■□□□□ 0.37
APTX-233ENST00000496030 C19orf44Q9H6X5 657 aa17.35■□□□□ 0.37
APTX-233ENST00000496030 ATF3P18847 181 aa17.34■□□□□ 0.37
APTX-233ENST00000496030 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
APTX-233ENST00000496030 IFT172Q9UG01 1749 aa17.34■□□□□ 0.37
APTX-233ENST00000496030 TBX22Q9Y458 520 aa17.34■□□□□ 0.37
APTX-233ENST00000496030 PPP1R15AO75807 674 aaPredicted RBP17.33■□□□□ 0.36
APTX-233ENST00000496030 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
APTX-233ENST00000496030 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
APTX-233ENST00000496030 ASXL1Q8IXJ9 1541 aa17.32■□□□□ 0.36
APTX-233ENST00000496030 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
APTX-233ENST00000496030 EP400Q96L91 3159 aa17.32■□□□□ 0.36
APTX-233ENST00000496030 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
APTX-233ENST00000496030 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
APTX-233ENST00000496030 RBM6P78332 1123 aaKnown RBP17.31■□□□□ 0.36
APTX-233ENST00000496030 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
APTX-233ENST00000496030 NRXN3Q9Y4C0 1643 aa17.31■□□□□ 0.36
APTX-233ENST00000496030 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
APTX-233ENST00000496030 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
APTX-233ENST00000496030 NRXN1Q9ULB1 1477 aa17.28■□□□□ 0.36
APTX-233ENST00000496030 DDX17Q92841 729 aaKnown RBP17.27■□□□□ 0.36
APTX-233ENST00000496030 PNPLA6Q8IY17 1366 aa17.27■□□□□ 0.35
APTX-233ENST00000496030 MYOM2P54296 1465 aa17.26■□□□□ 0.35
APTX-233ENST00000496030 DCAF11Q8TEB1 546 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms