RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 STAC3Q96MF2 364 aa22.35■■□□□ 1.17
PHF1-211ENST00000495509 UBR1Q8IWV7 1749 aa22.34■■□□□ 1.17
PHF1-211ENST00000495509 MYO3AQ8NEV4 1616 aa22.32■■□□□ 1.16
PHF1-211ENST00000495509 NBPF1Q3BBV0 1214 aa22.32■■□□□ 1.16
PHF1-211ENST00000495509 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
PHF1-211ENST00000495509 MYOM2P54296 1465 aa22.31■■□□□ 1.16
PHF1-211ENST00000495509 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
PHF1-211ENST00000495509 RIMS2Q9UQ26 1411 aa22.29■■□□□ 1.16
PHF1-211ENST00000495509 KDM5AP29375 1690 aaKnown RBP22.29■■□□□ 1.16
PHF1-211ENST00000495509 TRPM1Q7Z4N2 1603 aa22.28■■□□□ 1.16
PHF1-211ENST00000495509 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
PHF1-211ENST00000495509 CFAP70Q5T0N1 1121 aa22.27■■□□□ 1.16
PHF1-211ENST00000495509 RALGAPBQ86X10 1494 aa22.27■■□□□ 1.16
PHF1-211ENST00000495509 ZFYVE9O95405 1425 aa22.26■■□□□ 1.15
PHF1-211ENST00000495509 HIRIP3Q9BW71 556 aaPredicted RBP22.26■■□□□ 1.15
PHF1-211ENST00000495509 TMEM2Q9UHN6 1383 aa22.26■■□□□ 1.15
PHF1-211ENST00000495509 CEP170BQ9Y4F5 1589 aaPredicted RBP22.26■■□□□ 1.15
PHF1-211ENST00000495509 THEMISQ8N1K5 641 aaPredicted RBP22.25■■□□□ 1.15
PHF1-211ENST00000495509 ROCK2O75116 1388 aaKnown RBP22.25■■□□□ 1.15
PHF1-211ENST00000495509 CARD11Q9BXL7 1154 aa22.24■■□□□ 1.15
PHF1-211ENST00000495509 PIK3C2GO75747 1445 aa22.24■■□□□ 1.15
PHF1-211ENST00000495509 LTKP29376 864 aa22.23■■□□□ 1.15
PHF1-211ENST00000495509 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.22■■□□□ 1.15
PHF1-211ENST00000495509 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
PHF1-211ENST00000495509 TXNDC2Q86VQ3 553 aa22.2■■□□□ 1.14
PHF1-211ENST00000495509 ZNF142P52746 1687 aaPredicted RBP22.2■■□□□ 1.14
PHF1-211ENST00000495509 ZNF316A6NFI3 1004 aaPredicted RBP22.2■■□□□ 1.14
PHF1-211ENST00000495509 HSPA5P11021 654 aaKnown RBP22.2■■□□□ 1.14
PHF1-211ENST00000495509 HDGFP51858 240 aaKnown RBP22.2■■□□□ 1.14
PHF1-211ENST00000495509 GPRASP1Q5JY77 1395 aa22.19■■□□□ 1.14
PHF1-211ENST00000495509 ARHGAP23Q9P227 1491 aa22.19■■□□□ 1.14
PHF1-211ENST00000495509 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
PHF1-211ENST00000495509 SLIT1O75093 1534 aa22.18■■□□□ 1.14
PHF1-211ENST00000495509 KIAA1210Q9ULL0 1709 aa22.18■■□□□ 1.14
PHF1-211ENST00000495509 TMEM132EQ6IEE7 984 aa22.17■■□□□ 1.14
PHF1-211ENST00000495509 EID1Q9Y6B2 187 aa22.17■■□□□ 1.14
PHF1-211ENST00000495509 USP47Q96K76 1375 aa22.15■■□□□ 1.14
PHF1-211ENST00000495509 BCANQ96GW7 911 aa22.14■■□□□ 1.13
PHF1-211ENST00000495509 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
PHF1-211ENST00000495509 NRXN3Q9Y4C0 1643 aa22.12■■□□□ 1.13
PHF1-211ENST00000495509 LAMC1P11047 1609 aa22.1■■□□□ 1.13
PHF1-211ENST00000495509 ST20-MTHFSA0A0A6YYL1 179 aa22.1■■□□□ 1.13
PHF1-211ENST00000495509 ADGRB1O14514 1584 aa22.1■■□□□ 1.13
PHF1-211ENST00000495509 ANKLE2Q86XL3 938 aa22.1■■□□□ 1.13
PHF1-211ENST00000495509 PLEKHG1Q9ULL1 1385 aa22.1■■□□□ 1.13
PHF1-211ENST00000495509 SCAF11Q99590 1463 aaKnown RBP22.1■■□□□ 1.13
PHF1-211ENST00000495509 IQGAP1P46940 1657 aa22.09■■□□□ 1.13
PHF1-211ENST00000495509 SETBP1Q9Y6X0 1596 aa22.08■■□□□ 1.13
PHF1-211ENST00000495509 ASXL1Q8IXJ9 1541 aa22.08■■□□□ 1.12
PHF1-211ENST00000495509 HSPA2P54652 639 aa22.07■■□□□ 1.12
PHF1-211ENST00000495509 SLC26A8Q96RN1 970 aa22.07■■□□□ 1.12
PHF1-211ENST00000495509 TRAK1Q9UPV9 953 aa22.07■■□□□ 1.12
PHF1-211ENST00000495509 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
PHF1-211ENST00000495509 SETD1AO15047 1707 aaKnown RBP22.06■■□□□ 1.12
PHF1-211ENST00000495509 STK26Q9P289 416 aa22.06■■□□□ 1.12
PHF1-211ENST00000495509 NCKAP5LQ9HCH0 1330 aa22.06■■□□□ 1.12
PHF1-211ENST00000495509 METP08581 1390 aa22.05■■□□□ 1.12
PHF1-211ENST00000495509 C11orf95C9JLR9 678 aaPredicted RBP22.04■■□□□ 1.12
PHF1-211ENST00000495509 LMTK3Q96Q04 1460 aa22.03■■□□□ 1.12
PHF1-211ENST00000495509 MED14O60244 1454 aa22.02■■□□□ 1.12
PHF1-211ENST00000495509 YTHDC2Q9H6S0 1430 aaKnown RBP22.01■■□□□ 1.11
PHF1-211ENST00000495509 TESK2Q96S53 571 aa21.99■■□□□ 1.11
PHF1-211ENST00000495509 TBX22Q9Y458 520 aa21.99■■□□□ 1.11
PHF1-211ENST00000495509 POLR1AO95602 1720 aaPredicted RBP21.98■■□□□ 1.11
PHF1-211ENST00000495509 NPHP4O75161 1426 aaPredicted RBP21.96■■□□□ 1.11
PHF1-211ENST00000495509 LRPPRCP42704 1394 aaKnown RBP21.95■■□□□ 1.1
PHF1-211ENST00000495509 EIF3AQ14152 1382 aaKnown RBP21.95■■□□□ 1.1
PHF1-211ENST00000495509 WASHC2AQ641Q2 1341 aa21.95■■□□□ 1.1
PHF1-211ENST00000495509 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
PHF1-211ENST00000495509 CENPJQ9HC77 1338 aaPredicted RBP21.94■■□□□ 1.1
PHF1-211ENST00000495509 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
PHF1-211ENST00000495509 PTPRUQ92729 1446 aa21.94■■□□□ 1.1
PHF1-211ENST00000495509 ABCC11Q96J66 1382 aa21.93■■□□□ 1.1
PHF1-211ENST00000495509 WAPLQ7Z5K2 1190 aa21.92■■□□□ 1.1
PHF1-211ENST00000495509 PRAM1Q96QH2 718 aa21.92■■□□□ 1.1
PHF1-211ENST00000495509 KIF7Q2M1P5 1343 aa21.91■■□□□ 1.1
PHF1-211ENST00000495509 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
PHF1-211ENST00000495509 AMOTL2Q9Y2J4 779 aa21.91■■□□□ 1.1
PHF1-211ENST00000495509 CCDC7Q96M83 1385 aa21.9■■□□□ 1.1
PHF1-211ENST00000495509 DISP3Q9P2K9 1392 aa21.9■■□□□ 1.1
PHF1-211ENST00000495509 POGKQ9P215 609 aa21.89■■□□□ 1.1
PHF1-211ENST00000495509 STRCQ7RTU9 1775 aa21.89■■□□□ 1.09
PHF1-211ENST00000495509 PLEKHH1Q9ULM0 1364 aa21.89■■□□□ 1.09
PHF1-211ENST00000495509 DDX10Q13206 875 aaKnown RBP21.89■■□□□ 1.09
PHF1-211ENST00000495509 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.09
PHF1-211ENST00000495509 QRICH2Q9H0J4 1663 aa21.88■■□□□ 1.09
PHF1-211ENST00000495509 TMF1P82094 1093 aa21.87■■□□□ 1.09
PHF1-211ENST00000495509 ROBO2Q9HCK4 1378 aa21.87■■□□□ 1.09
PHF1-211ENST00000495509 DLC1Q96QB1 1528 aa21.87■■□□□ 1.09
PHF1-211ENST00000495509 TECPR2O15040 1411 aa21.86■■□□□ 1.09
PHF1-211ENST00000495509 KNDC1Q76NI1 1749 aa21.85■■□□□ 1.09
PHF1-211ENST00000495509 KCNA6P17658 529 aa21.84■■□□□ 1.09
PHF1-211ENST00000495509 MINK1Q8N4C8 1332 aaPredicted RBP21.84■■□□□ 1.09
PHF1-211ENST00000495509 PIK3R4Q99570 1358 aa21.84■■□□□ 1.09
PHF1-211ENST00000495509 CHD2O14647 1828 aaKnown RBP21.84■■□□□ 1.09
PHF1-211ENST00000495509 SIRT1Q96EB6 747 aa21.84■■□□□ 1.09
PHF1-211ENST00000495509 SBNO2Q9Y2G9 1366 aa21.83■■□□□ 1.09
PHF1-211ENST00000495509 CPS1P31327 1500 aa21.82■■□□□ 1.08
PHF1-211ENST00000495509 DIEXFQ68CQ4 756 aaKnown RBP21.82■■□□□ 1.08
PHF1-211ENST00000495509 FAM135BQ49AJ0 1406 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms