RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
KPNA1-209ENST00000493510 TRPC5Q9UL62 973 aaPredicted RBP11.53□□□□□ -0.56
KPNA1-209ENST00000493510 ATP7AQ04656 1500 aa11.53□□□□□ -0.56
KPNA1-209ENST00000493510 MSH6P52701 1360 aa11.53□□□□□ -0.56
KPNA1-209ENST00000493510 GGT6Q6P531 493 aa11.52□□□□□ -0.57
KPNA1-209ENST00000493510 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.57
KPNA1-209ENST00000493510 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
KPNA1-209ENST00000493510 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
KPNA1-209ENST00000493510 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
KPNA1-209ENST00000493510 KIF14Q15058 1648 aa11.5□□□□□ -0.57
KPNA1-209ENST00000493510 R3HDM1Q15032 1099 aaKnown RBP11.5□□□□□ -0.57
KPNA1-209ENST00000493510 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
KPNA1-209ENST00000493510 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
KPNA1-209ENST00000493510 NLRP1Q9C000 1473 aa11.5□□□□□ -0.57
KPNA1-209ENST00000493510 AKT1S1Q96B36 256 aa11.49□□□□□ -0.57
KPNA1-209ENST00000493510 SCAF11Q99590 1463 aaKnown RBP11.49□□□□□ -0.57
KPNA1-209ENST00000493510 MAP3K1Q13233 1512 aa11.49□□□□□ -0.57
KPNA1-209ENST00000493510 FBXO31Q5XUX0 539 aaPredicted RBP11.48□□□□□ -0.57
KPNA1-209ENST00000493510 PPP1R1BQ9UD71 204 aaPredicted RBP11.48□□□□□ -0.57
KPNA1-209ENST00000493510 USP21Q9UK80 565 aa11.48□□□□□ -0.57
KPNA1-209ENST00000493510 NINLQ9Y2I6 1382 aa11.48□□□□□ -0.57
KPNA1-209ENST00000493510 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
KPNA1-209ENST00000493510 RTEL1-TNFRSF6BF6WH68 1400 aa11.46□□□□□ -0.57
KPNA1-209ENST00000493510 BAG6P46379 1132 aa11.46□□□□□ -0.57
KPNA1-209ENST00000493510 ABCC3O15438 1527 aa11.45□□□□□ -0.58
KPNA1-209ENST00000493510 KCNA6P17658 529 aa11.45□□□□□ -0.58
KPNA1-209ENST00000493510 GSE1Q14687 1217 aa11.45□□□□□ -0.58
KPNA1-209ENST00000493510 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
KPNA1-209ENST00000493510 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
KPNA1-209ENST00000493510 ZC3H13Q5T200 1668 aaKnown RBP11.45□□□□□ -0.58
KPNA1-209ENST00000493510 AHDC1Q5TGY3 1603 aaPredicted RBP11.45□□□□□ -0.58
KPNA1-209ENST00000493510 MIA2Q96PC5 1412 aa11.44□□□□□ -0.58
KPNA1-209ENST00000493510 TNS4Q8IZW8 715 aa11.44□□□□□ -0.58
KPNA1-209ENST00000493510 NUBP1P53384 320 aa11.43□□□□□ -0.58
KPNA1-209ENST00000493510 ARHGAP5Q13017 1502 aa11.43□□□□□ -0.58
KPNA1-209ENST00000493510 CTTNBP2Q8WZ74 1663 aa11.43□□□□□ -0.58
KPNA1-209ENST00000493510 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
KPNA1-209ENST00000493510 PRDM15P57071 1507 aaPredicted RBP11.41□□□□□ -0.58
KPNA1-209ENST00000493510 COL13A1Q5TAT6 717 aaPredicted RBP11.41□□□□□ -0.58
KPNA1-209ENST00000493510 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
KPNA1-209ENST00000493510 PZPP20742 1482 aa11.4□□□□□ -0.58
KPNA1-209ENST00000493510 DCAF8Q5TAQ9 597 aa11.4□□□□□ -0.58
KPNA1-209ENST00000493510 BCANQ96GW7 911 aa11.4□□□□□ -0.58
KPNA1-209ENST00000493510 KIDINS220Q9ULH0 1771 aa11.4□□□□□ -0.58
KPNA1-209ENST00000493510 ATRNO75882 1429 aa11.4□□□□□ -0.58
KPNA1-209ENST00000493510 DIP2AQ14689 1571 aa11.4□□□□□ -0.58
KPNA1-209ENST00000493510 ADAMTS2O95450 1211 aa11.39□□□□□ -0.59
KPNA1-209ENST00000493510 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
KPNA1-209ENST00000493510 LRRC59Q96AG4 307 aaKnown RBP11.39□□□□□ -0.59
KPNA1-209ENST00000493510 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
KPNA1-209ENST00000493510 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
KPNA1-209ENST00000493510 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
KPNA1-209ENST00000493510 UNC13BO14795 1591 aa11.38□□□□□ -0.59
KPNA1-209ENST00000493510 HSPA6P17066 643 aa11.38□□□□□ -0.59
KPNA1-209ENST00000493510 TXNDC2Q86VQ3 553 aa11.38□□□□□ -0.59
KPNA1-209ENST00000493510 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
KPNA1-209ENST00000493510 SETD5Q9C0A6 1442 aa11.37□□□□□ -0.59
KPNA1-209ENST00000493510 ARHGAP23Q9P227 1491 aa11.37□□□□□ -0.59
KPNA1-209ENST00000493510 SPON1Q9HCB6 807 aa11.36□□□□□ -0.59
KPNA1-209ENST00000493510 EID1Q9Y6B2 187 aa11.36□□□□□ -0.59
KPNA1-209ENST00000493510 NKTRP30414 1462 aaKnown RBP11.36□□□□□ -0.59
KPNA1-209ENST00000493510 LTKP29376 864 aa11.35□□□□□ -0.59
KPNA1-209ENST00000493510 A2MP01023 1474 aa11.35□□□□□ -0.59
KPNA1-209ENST00000493510 RALGAPBQ86X10 1494 aa11.35□□□□□ -0.59
KPNA1-209ENST00000493510 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
KPNA1-209ENST00000493510 HS6ST3Q8IZP7 471 aa11.34□□□□□ -0.59
KPNA1-209ENST00000493510 RNF25Q96BH1 459 aaPredicted RBP11.34□□□□□ -0.59
KPNA1-209ENST00000493510 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
KPNA1-209ENST00000493510 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
KPNA1-209ENST00000493510 SPAG9O60271 1321 aaKnown RBP11.34□□□□□ -0.59
KPNA1-209ENST00000493510 PLXNC1O60486 1568 aa11.33□□□□□ -0.6
KPNA1-209ENST00000493510 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
KPNA1-209ENST00000493510 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
KPNA1-209ENST00000493510 PNPLA6Q8IY17 1366 aa11.31□□□□□ -0.6
KPNA1-209ENST00000493510 EN1Q05925 392 aaPredicted RBP11.31□□□□□ -0.6
KPNA1-209ENST00000493510 BRINP3Q76B58 766 aa11.31□□□□□ -0.6
KPNA1-209ENST00000493510 UTRNP46939 3433 aa11.31□□□□□ -0.6
KPNA1-209ENST00000493510 CAMTA1Q9Y6Y1 1673 aa11.3□□□□□ -0.6
KPNA1-209ENST00000493510 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
KPNA1-209ENST00000493510 RIOK3O14730 519 aaKnown RBP11.29□□□□□ -0.6
KPNA1-209ENST00000493510 KCNQ2O43526 872 aa11.29□□□□□ -0.6
KPNA1-209ENST00000493510 ATF3P18847 181 aa11.29□□□□□ -0.6
KPNA1-209ENST00000493510 C14orf37Q86TY3 774 aa11.29□□□□□ -0.6
KPNA1-209ENST00000493510 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
KPNA1-209ENST00000493510 KDM5AP29375 1690 aaKnown RBP11.29□□□□□ -0.6
KPNA1-209ENST00000493510 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
KPNA1-209ENST00000493510 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
KPNA1-209ENST00000493510 NCOA3Q9Y6Q9 1424 aa11.27□□□□□ -0.6
KPNA1-209ENST00000493510 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
KPNA1-209ENST00000493510 CDK11AQ9UQ88 783 aaPredicted RBP11.27□□□□□ -0.61
KPNA1-209ENST00000493510 ADGBQ8N7X0 1667 aa11.27□□□□□ -0.61
KPNA1-209ENST00000493510 SAMD9LQ8IVG5 1584 aa11.26□□□□□ -0.61
KPNA1-209ENST00000493510 PTCH1Q13635 1447 aa11.26□□□□□ -0.61
KPNA1-209ENST00000493510 SLIT1O75093 1534 aa11.25□□□□□ -0.61
KPNA1-209ENST00000493510 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
KPNA1-209ENST00000493510 SLC26A8Q96RN1 970 aa11.25□□□□□ -0.61
KPNA1-209ENST00000493510 SPHKAPQ2M3C7 1700 aa11.24□□□□□ -0.61
KPNA1-209ENST00000493510 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
KPNA1-209ENST00000493510 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
KPNA1-209ENST00000493510 KRT27Q7Z3Y8 459 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms