RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 UPF2Q9HAU5 1272 aaKnown RBP18.98■□□□□ 0.63
SMTN-219ENST00000493335 PLEKHH2Q8IVE3 1493 aa18.98■□□□□ 0.63
SMTN-219ENST00000493335 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
SMTN-219ENST00000493335 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
SMTN-219ENST00000493335 PLA2R1Q13018 1463 aa18.98■□□□□ 0.63
SMTN-219ENST00000493335 ZNF521Q96K83 1311 aa18.98■□□□□ 0.63
SMTN-219ENST00000493335 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
SMTN-219ENST00000493335 E9PSI1 815 aa18.97■□□□□ 0.63
SMTN-219ENST00000493335 PTPRGP23470 1445 aa18.97■□□□□ 0.63
SMTN-219ENST00000493335 GPRASP1Q5JY77 1395 aa18.97■□□□□ 0.63
SMTN-219ENST00000493335 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
SMTN-219ENST00000493335 TNNQ9UQP3 1299 aa18.96■□□□□ 0.63
SMTN-219ENST00000493335 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
SMTN-219ENST00000493335 CCDC141Q6ZP82 1450 aa18.95■□□□□ 0.62
SMTN-219ENST00000493335 TRPM1Q7Z4N2 1603 aa18.94■□□□□ 0.62
SMTN-219ENST00000493335 ABCC10Q5T3U5 1492 aa18.94■□□□□ 0.62
SMTN-219ENST00000493335 PLEKHG5O94827 1062 aa18.94■□□□□ 0.62
SMTN-219ENST00000493335 USP19O94966 1318 aa18.93■□□□□ 0.62
SMTN-219ENST00000493335 CDC42BPAQ5VT25 1732 aa18.93■□□□□ 0.62
SMTN-219ENST00000493335 NKTRP30414 1462 aaKnown RBP18.92■□□□□ 0.62
SMTN-219ENST00000493335 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
SMTN-219ENST00000493335 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
SMTN-219ENST00000493335 ZMYND15Q9H091 742 aa18.91■□□□□ 0.62
SMTN-219ENST00000493335 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
SMTN-219ENST00000493335 FAM43AQ8N2R8 423 aa18.9■□□□□ 0.62
SMTN-219ENST00000493335 MAPK8IP3Q9UPT6 1336 aa18.9■□□□□ 0.62
SMTN-219ENST00000493335 WDR7Q9Y4E6 1490 aa18.89■□□□□ 0.61
SMTN-219ENST00000493335 EIF3AQ14152 1382 aaKnown RBP18.88■□□□□ 0.61
SMTN-219ENST00000493335 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
SMTN-219ENST00000493335 WWC1Q8IX03 1113 aa18.88■□□□□ 0.61
SMTN-219ENST00000493335 INSRP06213 1382 aa18.88■□□□□ 0.61
SMTN-219ENST00000493335 GLIPR1L2Q4G1C9 344 aa18.88■□□□□ 0.61
SMTN-219ENST00000493335 CFAP70Q5T0N1 1121 aa18.88■□□□□ 0.61
SMTN-219ENST00000493335 PCDHB15Q9Y5E8 787 aa18.88■□□□□ 0.61
SMTN-219ENST00000493335 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
SMTN-219ENST00000493335 MFAP1P55081 439 aaKnown RBP18.87■□□□□ 0.61
SMTN-219ENST00000493335 PDZRN3Q9UPQ7 1066 aa18.87■□□□□ 0.61
SMTN-219ENST00000493335 RLBP1P12271 317 aa18.87■□□□□ 0.61
SMTN-219ENST00000493335 TRMT2AQ8IZ69 625 aaKnown RBP18.87■□□□□ 0.61
SMTN-219ENST00000493335 VSIG10Q8N0Z9 540 aa18.87■□□□□ 0.61
SMTN-219ENST00000493335 PODXL2Q9NZ53 605 aa18.87■□□□□ 0.61
SMTN-219ENST00000493335 ARHGAP5Q13017 1502 aa18.86■□□□□ 0.61
SMTN-219ENST00000493335 SYCP2Q9BX26 1530 aa18.86■□□□□ 0.61
SMTN-219ENST00000493335 PDE3AQ14432 1141 aa18.86■□□□□ 0.61
SMTN-219ENST00000493335 RRAGDQ9NQL2 400 aaPredicted RBP18.86■□□□□ 0.61
SMTN-219ENST00000493335 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
SMTN-219ENST00000493335 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
SMTN-219ENST00000493335 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
SMTN-219ENST00000493335 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
SMTN-219ENST00000493335 ADCY10Q96PN6 1610 aa18.84■□□□□ 0.61
SMTN-219ENST00000493335 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
SMTN-219ENST00000493335 L1TD1Q5T7N2 865 aaKnown RBP18.83■□□□□ 0.61
SMTN-219ENST00000493335 PANK2Q9BZ23 570 aa18.83■□□□□ 0.6
SMTN-219ENST00000493335 FTSJ3Q8IY81 847 aaKnown RBP18.82■□□□□ 0.6
SMTN-219ENST00000493335 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
SMTN-219ENST00000493335 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
SMTN-219ENST00000493335 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
SMTN-219ENST00000493335 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
SMTN-219ENST00000493335 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
SMTN-219ENST00000493335 AFAP1Q8N556 730 aa18.8■□□□□ 0.6
SMTN-219ENST00000493335 SAMD9LQ8IVG5 1584 aa18.8■□□□□ 0.6
SMTN-219ENST00000493335 TBC1D32Q96NH3 1257 aa18.78■□□□□ 0.6
SMTN-219ENST00000493335 RWDD1Q9H446 243 aaPredicted RBP18.78■□□□□ 0.6
SMTN-219ENST00000493335 TRAK1Q9UPV9 953 aa18.78■□□□□ 0.6
SMTN-219ENST00000493335 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
SMTN-219ENST00000493335 ABCA8O94911 1581 aa18.78■□□□□ 0.6
SMTN-219ENST00000493335 XRCC6P12956 609 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMTN-219ENST00000493335 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
SMTN-219ENST00000493335 ANTXR1Q9H6X2 564 aa18.76■□□□□ 0.59
SMTN-219ENST00000493335 U2AF1L5P0DN76 240 aaPredicted RBP18.76■□□□□ 0.59
SMTN-219ENST00000493335 U2AF1Q01081 240 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMTN-219ENST00000493335 NUP160Q12769 1436 aa18.76■□□□□ 0.59
SMTN-219ENST00000493335 SCAF11Q99590 1463 aaKnown RBP18.75■□□□□ 0.59
SMTN-219ENST00000493335 TSR2Q969E8 191 aaKnown RBP18.75■□□□□ 0.59
SMTN-219ENST00000493335 MCM4P33991 863 aa18.75■□□□□ 0.59
SMTN-219ENST00000493335 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
SMTN-219ENST00000493335 C22orf23Q9BZE7 217 aa18.75■□□□□ 0.59
SMTN-219ENST00000493335 KIF3BO15066 747 aa18.74■□□□□ 0.59
SMTN-219ENST00000493335 MTHFSP49914 203 aa18.74■□□□□ 0.59
SMTN-219ENST00000493335 ITPRIPQ8IWB1 547 aa18.74■□□□□ 0.59
SMTN-219ENST00000493335 RUNDC1Q96C34 613 aa18.74■□□□□ 0.59
SMTN-219ENST00000493335 PNNQ9H307 717 aaKnown RBP18.74■□□□□ 0.59
SMTN-219ENST00000493335 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
SMTN-219ENST00000493335 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
SMTN-219ENST00000493335 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
SMTN-219ENST00000493335 EFCAB2Q5VUJ9 269 aa18.73■□□□□ 0.59
SMTN-219ENST00000493335 ADGRF5Q8IZF2 1346 aa18.73■□□□□ 0.59
SMTN-219ENST00000493335 TRAK2O60296 914 aa18.72■□□□□ 0.59
SMTN-219ENST00000493335 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
SMTN-219ENST00000493335 SMC4Q9NTJ3 1288 aa18.72■□□□□ 0.59
SMTN-219ENST00000493335 SAFB2Q14151 953 aaKnown RBP eCLIP18.71■□□□□ 0.59
SMTN-219ENST00000493335 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
SMTN-219ENST00000493335 HSCBQ8IWL3 235 aa18.7■□□□□ 0.58
SMTN-219ENST00000493335 HSP90AA1P07900 732 aaKnown RBP18.7■□□□□ 0.58
SMTN-219ENST00000493335 TMEM132EQ6IEE7 984 aa18.7■□□□□ 0.58
SMTN-219ENST00000493335 DZIP1LQ8IYY4 767 aaKnown RBP18.69■□□□□ 0.58
SMTN-219ENST00000493335 MYO5CQ9NQX4 1742 aa18.69■□□□□ 0.58
SMTN-219ENST00000493335 CHMP5Q9NZZ3 219 aa18.68■□□□□ 0.58
SMTN-219ENST00000493335 ZKSCAN2Q63HK3 967 aa18.68■□□□□ 0.58
SMTN-219ENST00000493335 CFAP53Q96M91 514 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms