RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
TRIM11-204ENST00000493030 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
TRIM11-204ENST00000493030 MCTP1Q6DN14 999 aa16.76■□□□□ 0.27
TRIM11-204ENST00000493030 RIPK4P57078 832 aa16.76■□□□□ 0.27
TRIM11-204ENST00000493030 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
TRIM11-204ENST00000493030 PDE4AP27815 886 aa16.75■□□□□ 0.27
TRIM11-204ENST00000493030 DDX49Q9Y6V7 483 aaKnown RBP16.74■□□□□ 0.27
TRIM11-204ENST00000493030 DDX11L8A8MPP1 907 aa16.74■□□□□ 0.27
TRIM11-204ENST00000493030 APPP05067 770 aa16.74■□□□□ 0.27
TRIM11-204ENST00000493030 NOL10Q9BSC4 688 aaKnown RBP16.73■□□□□ 0.27
TRIM11-204ENST00000493030 IFIT2P09913 472 aaKnown RBP16.73■□□□□ 0.27
TRIM11-204ENST00000493030 GOLGA6L1Q8N7Z2 621 aa16.73■□□□□ 0.27
TRIM11-204ENST00000493030 FKBP5Q13451 457 aaPredicted RBP16.73■□□□□ 0.27
TRIM11-204ENST00000493030 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
TRIM11-204ENST00000493030 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
TRIM11-204ENST00000493030 ATP6V1DQ9Y5K8 247 aa16.72■□□□□ 0.27
TRIM11-204ENST00000493030 TRIM34Q9BYJ4 488 aa16.71■□□□□ 0.27
TRIM11-204ENST00000493030 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
TRIM11-204ENST00000493030 AMOTL1Q8IY63 956 aa16.71■□□□□ 0.27
TRIM11-204ENST00000493030 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
TRIM11-204ENST00000493030 DDX19BQ9UMR2 479 aa16.71■□□□□ 0.27
TRIM11-204ENST00000493030 BECN2A8MW95 431 aa16.7■□□□□ 0.26
TRIM11-204ENST00000493030 GOLGA6L19H0YKK7 550 aa16.7■□□□□ 0.26
TRIM11-204ENST00000493030 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
TRIM11-204ENST00000493030 WWC1Q8IX03 1113 aa16.7■□□□□ 0.26
TRIM11-204ENST00000493030 DDX58O95786 925 aaKnown RBP16.7■□□□□ 0.26
TRIM11-204ENST00000493030 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
TRIM11-204ENST00000493030 CHMP4CQ96CF2 233 aa16.7■□□□□ 0.26
TRIM11-204ENST00000493030 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
TRIM11-204ENST00000493030 FBXW7Q969H0 707 aa16.7■□□□□ 0.26
TRIM11-204ENST00000493030 ANO2Q9NQ90 1003 aa16.7■□□□□ 0.26
TRIM11-204ENST00000493030 ZBED9Q6R2W3 1325 aa16.69■□□□□ 0.26
TRIM11-204ENST00000493030 DZIP1LQ8IYY4 767 aaKnown RBP16.69■□□□□ 0.26
TRIM11-204ENST00000493030 HMOX1P09601 288 aa16.69■□□□□ 0.26
TRIM11-204ENST00000493030 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
TRIM11-204ENST00000493030 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
TRIM11-204ENST00000493030 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
TRIM11-204ENST00000493030 DHX16O60231 1041 aaKnown RBP16.68■□□□□ 0.26
TRIM11-204ENST00000493030 REC8O95072 547 aa16.68■□□□□ 0.26
TRIM11-204ENST00000493030 TNNT3P45378 269 aaPredicted RBP16.68■□□□□ 0.26
TRIM11-204ENST00000493030 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
TRIM11-204ENST00000493030 TRIM29Q14134 588 aa16.68■□□□□ 0.26
TRIM11-204ENST00000493030 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRIM11-204ENST00000493030 CPLX1O14810 134 aa16.67■□□□□ 0.26
TRIM11-204ENST00000493030 TCEAL9Q9UHQ7 104 aa16.67■□□□□ 0.26
TRIM11-204ENST00000493030 TSPYL4Q9UJ04 414 aa16.67■□□□□ 0.26
TRIM11-204ENST00000493030 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
TRIM11-204ENST00000493030 CTDP1Q9Y5B0 961 aaPredicted RBP16.67■□□□□ 0.26
TRIM11-204ENST00000493030 CCAR2Q8N163 923 aaKnown RBP16.66■□□□□ 0.26
TRIM11-204ENST00000493030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.66■□□□□ 0.26
TRIM11-204ENST00000493030 RAPGEF4Q8WZA2 1011 aa16.65■□□□□ 0.26
TRIM11-204ENST00000493030 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
TRIM11-204ENST00000493030 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
TRIM11-204ENST00000493030 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRIM11-204ENST00000493030 RUNDC1Q96C34 613 aa16.65■□□□□ 0.26
TRIM11-204ENST00000493030 TRDNQ13061 729 aa16.64■□□□□ 0.26
TRIM11-204ENST00000493030 TPM2P07951 284 aa16.64■□□□□ 0.25
TRIM11-204ENST00000493030 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
TRIM11-204ENST00000493030 ATF3P18847 181 aa16.63■□□□□ 0.25
TRIM11-204ENST00000493030 TPM1P09493 284 aa16.63■□□□□ 0.25
TRIM11-204ENST00000493030 NLRP2Q9NX02 1062 aa16.63■□□□□ 0.25
TRIM11-204ENST00000493030 NFXL1Q6ZNB6 911 aa16.63■□□□□ 0.25
TRIM11-204ENST00000493030 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
TRIM11-204ENST00000493030 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
TRIM11-204ENST00000493030 SKOR2Q2VWA4 1001 aaPredicted RBP16.62■□□□□ 0.25
TRIM11-204ENST00000493030 GNAI1P63096 354 aa16.62■□□□□ 0.25
TRIM11-204ENST00000493030 RNF20Q5VTR2 975 aa16.62■□□□□ 0.25
TRIM11-204ENST00000493030 TMEM132EQ6IEE7 984 aa16.61■□□□□ 0.25
TRIM11-204ENST00000493030 RIC3Q7Z5B4 369 aa16.61■□□□□ 0.25
TRIM11-204ENST00000493030 PCMTD1Q96MG8 357 aaPredicted RBP16.61■□□□□ 0.25
TRIM11-204ENST00000493030 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
TRIM11-204ENST00000493030 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
TRIM11-204ENST00000493030 LNPKQ9C0E8 428 aa16.61■□□□□ 0.25
TRIM11-204ENST00000493030 NEUROD6Q96NK8 337 aa16.6■□□□□ 0.25
TRIM11-204ENST00000493030 MYOM3Q5VTT5 1437 aa16.6■□□□□ 0.25
TRIM11-204ENST00000493030 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
TRIM11-204ENST00000493030 BICD2Q8TD16 824 aa16.6■□□□□ 0.25
TRIM11-204ENST00000493030 FOSBP53539 338 aa16.6■□□□□ 0.25
TRIM11-204ENST00000493030 VPS37CA5D8V6 355 aaPredicted RBP16.6■□□□□ 0.25
TRIM11-204ENST00000493030 ERICH2A1L162 156 aa16.59■□□□□ 0.25
TRIM11-204ENST00000493030 RBM33Q96EV2 1170 aaKnown RBP16.58■□□□□ 0.25
TRIM11-204ENST00000493030 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.25
TRIM11-204ENST00000493030 NLRP6P59044 892 aa16.58■□□□□ 0.24
TRIM11-204ENST00000493030 ZNF592Q92610 1267 aa16.57■□□□□ 0.24
TRIM11-204ENST00000493030 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
TRIM11-204ENST00000493030 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
TRIM11-204ENST00000493030 CCDC47Q96A33 483 aaKnown RBP16.57■□□□□ 0.24
TRIM11-204ENST00000493030 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
TRIM11-204ENST00000493030 INTS3Q68E01 1043 aaKnown RBP16.57■□□□□ 0.24
TRIM11-204ENST00000493030 CFTRP13569 1480 aa16.57■□□□□ 0.24
TRIM11-204ENST00000493030 FYB1O15117 783 aa16.57■□□□□ 0.24
TRIM11-204ENST00000493030 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
TRIM11-204ENST00000493030 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
TRIM11-204ENST00000493030 ERC2O15083 957 aa16.56■□□□□ 0.24
TRIM11-204ENST00000493030 WASHC4Q2M389 1173 aa16.56■□□□□ 0.24
TRIM11-204ENST00000493030 GSE1Q14687 1217 aa16.56■□□□□ 0.24
TRIM11-204ENST00000493030 PANK1Q8TE04 598 aa16.56■□□□□ 0.24
TRIM11-204ENST00000493030 SMC3Q9UQE7 1217 aa16.56■□□□□ 0.24
TRIM11-204ENST00000493030 IPO7O95373 1038 aaKnown RBP16.55■□□□□ 0.24
TRIM11-204ENST00000493030 CCDC27Q2M243 656 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms