RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 ADGBQ8N7X0 1667 aa7.59□□□□□ -1.19
UBR4-215ENST00000492606 REREQ9P2R6 1566 aa7.59□□□□□ -1.2
UBR4-215ENST00000492606 NKX1-1Q15270 411 aaPredicted RBP7.58□□□□□ -1.2
UBR4-215ENST00000492606 SPRYD3Q8NCJ5 442 aa7.58□□□□□ -1.2
UBR4-215ENST00000492606 DCAF8Q5TAQ9 597 aa7.57□□□□□ -1.2
UBR4-215ENST00000492606 DEPDC5O75140 1603 aa7.56□□□□□ -1.2
UBR4-215ENST00000492606 CHRM1P11229 460 aaPredicted RBP7.56□□□□□ -1.2
UBR4-215ENST00000492606 C8orf37Q96NL8 207 aa7.56□□□□□ -1.2
UBR4-215ENST00000492606 ABCA6Q8N139 1617 aa7.56□□□□□ -1.2
UBR4-215ENST00000492606 CLTCQ00610 1675 aaKnown RBP7.55□□□□□ -1.2
UBR4-215ENST00000492606 ABCC1P33527 1531 aa7.55□□□□□ -1.2
UBR4-215ENST00000492606 PLCH2O75038 1416 aa7.54□□□□□ -1.2
UBR4-215ENST00000492606 HSPA6P17066 643 aa7.54□□□□□ -1.2
UBR4-215ENST00000492606 ZC3H13Q5T200 1668 aaKnown RBP7.54□□□□□ -1.2
UBR4-215ENST00000492606 RIOK3O14730 519 aaKnown RBP7.53□□□□□ -1.2
UBR4-215ENST00000492606 LRRC9Q6ZRR7 1453 aa7.53□□□□□ -1.2
UBR4-215ENST00000492606 ITSN2Q9NZM3 1697 aa7.53□□□□□ -1.2
UBR4-215ENST00000492606 MAP3K1Q13233 1512 aa7.52□□□□□ -1.2
UBR4-215ENST00000492606 KDM5DQ9BY66 1539 aa7.52□□□□□ -1.2
UBR4-215ENST00000492606 DIP2AQ14689 1571 aa7.52□□□□□ -1.21
UBR4-215ENST00000492606 TMEM94Q12767 1356 aa7.52□□□□□ -1.21
UBR4-215ENST00000492606 SLAIN2Q9P270 581 aa7.52□□□□□ -1.21
UBR4-215ENST00000492606 NINLQ9Y2I6 1382 aa7.51□□□□□ -1.21
UBR4-215ENST00000492606 GTPBP6O43824 516 aaPredicted RBP7.51□□□□□ -1.21
UBR4-215ENST00000492606 AFAP1Q8N556 730 aa7.51□□□□□ -1.21
UBR4-215ENST00000492606 FAM212AQ96EL1 285 aa7.51□□□□□ -1.21
UBR4-215ENST00000492606 BCANQ96GW7 911 aa7.51□□□□□ -1.21
UBR4-215ENST00000492606 SGIP1Q9BQI5 828 aa7.51□□□□□ -1.21
UBR4-215ENST00000492606 TNS2Q63HR2 1409 aa7.5□□□□□ -1.21
UBR4-215ENST00000492606 CARMIL1Q5VZK9 1371 aa7.49□□□□□ -1.21
UBR4-215ENST00000492606 CHADLQ6NUI6 762 aa7.49□□□□□ -1.21
UBR4-215ENST00000492606 DNAJC5GQ8N7S2 189 aa7.49□□□□□ -1.21
UBR4-215ENST00000492606 PRKCSHP14314 528 aaPredicted RBP7.48□□□□□ -1.21
UBR4-215ENST00000492606 SF3B2Q13435 895 aaKnown RBP7.48□□□□□ -1.21
UBR4-215ENST00000492606 VGFO15240 615 aaPredicted RBP7.47□□□□□ -1.21
UBR4-215ENST00000492606 PYGBP11216 843 aa7.47□□□□□ -1.21
UBR4-215ENST00000492606 MYT1LQ9UL68 1186 aa7.47□□□□□ -1.21
UBR4-215ENST00000492606 WWC3Q9ULE0 1092 aa7.47□□□□□ -1.21
UBR4-215ENST00000492606 AHDC1Q5TGY3 1603 aaPredicted RBP7.47□□□□□ -1.21
UBR4-215ENST00000492606 BRWD3Q6RI45 1802 aa7.47□□□□□ -1.21
UBR4-215ENST00000492606 SHANK3Q9BYB0 1731 aa7.47□□□□□ -1.21
UBR4-215ENST00000492606 ATRNO75882 1429 aa7.46□□□□□ -1.21
UBR4-215ENST00000492606 PPP1R1BQ9UD71 204 aaPredicted RBP7.46□□□□□ -1.22
UBR4-215ENST00000492606 TRPC5Q9UL62 973 aaPredicted RBP7.46□□□□□ -1.22
UBR4-215ENST00000492606 PCNTO95613 3336 aa7.46□□□□□ -1.22
UBR4-215ENST00000492606 ZNF518AQ6AHZ1 1483 aa7.45□□□□□ -1.22
UBR4-215ENST00000492606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.45□□□□□ -1.22
UBR4-215ENST00000492606 FAM161AQ3B820 660 aa7.45□□□□□ -1.22
UBR4-215ENST00000492606 THEMISQ8N1K5 641 aaPredicted RBP7.45□□□□□ -1.22
UBR4-215ENST00000492606 ZFP91Q96JP5 570 aaPredicted RBP7.45□□□□□ -1.22
UBR4-215ENST00000492606 USP21Q9UK80 565 aa7.45□□□□□ -1.22
UBR4-215ENST00000492606 TAOK2Q9UL54 1235 aa7.45□□□□□ -1.22
UBR4-215ENST00000492606 UNC13BO14795 1591 aa7.45□□□□□ -1.22
UBR4-215ENST00000492606 ATP7AQ04656 1500 aa7.44□□□□□ -1.22
UBR4-215ENST00000492606 EN1Q05925 392 aaPredicted RBP7.44□□□□□ -1.22
UBR4-215ENST00000492606 FBXO31Q5XUX0 539 aaPredicted RBP7.44□□□□□ -1.22
UBR4-215ENST00000492606 KIF14Q15058 1648 aa7.43□□□□□ -1.22
UBR4-215ENST00000492606 STK25O00506 426 aa7.43□□□□□ -1.22
UBR4-215ENST00000492606 FARP1Q9Y4F1 1045 aaPredicted RBP7.43□□□□□ -1.22
UBR4-215ENST00000492606 TNRQ92752 1358 aa7.43□□□□□ -1.22
UBR4-215ENST00000492606 MLH3Q9UHC1 1453 aa7.43□□□□□ -1.22
UBR4-215ENST00000492606 TIAM1Q13009 1591 aa7.42□□□□□ -1.22
UBR4-215ENST00000492606 ADAMTS2O95450 1211 aa7.42□□□□□ -1.22
UBR4-215ENST00000492606 BAG6P46379 1132 aa7.42□□□□□ -1.22
UBR4-215ENST00000492606 PROSER2Q86WR7 435 aaPredicted RBP7.42□□□□□ -1.22
UBR4-215ENST00000492606 UGGT1Q9NYU2 1555 aa7.42□□□□□ -1.22
UBR4-215ENST00000492606 FXR2P51116 673 aaKnown RBP eCLIP7.41□□□□□ -1.222e-18■■■■□ 22.3
UBR4-215ENST00000492606 BCL11BQ9C0K0 894 aaPredicted RBP7.41□□□□□ -1.22
UBR4-215ENST00000492606 RALGAPBQ86X10 1494 aa7.41□□□□□ -1.22
UBR4-215ENST00000492606 SPON1Q9HCB6 807 aa7.4□□□□□ -1.22
UBR4-215ENST00000492606 FAM135AQ9P2D6 1515 aa7.4□□□□□ -1.22
UBR4-215ENST00000492606 KIDINS220Q9ULH0 1771 aa7.4□□□□□ -1.23
UBR4-215ENST00000492606 ARHGAP23Q9P227 1491 aa7.39□□□□□ -1.23
UBR4-215ENST00000492606 KCNQ2O43526 872 aa7.39□□□□□ -1.23
UBR4-215ENST00000492606 FNBP4Q8N3X1 1017 aaPredicted RBP7.39□□□□□ -1.23
UBR4-215ENST00000492606 STK24Q9Y6E0 443 aa7.39□□□□□ -1.23
UBR4-215ENST00000492606 CCDC61Q9Y6R9 512 aa7.39□□□□□ -1.23
UBR4-215ENST00000492606 GOLGA3Q08378 1498 aa7.38□□□□□ -1.23
UBR4-215ENST00000492606 MSH6P52701 1360 aa7.38□□□□□ -1.23
UBR4-215ENST00000492606 TSPYL2Q9H2G4 693 aaPredicted RBP7.38□□□□□ -1.23
UBR4-215ENST00000492606 KDM5AP29375 1690 aaKnown RBP7.38□□□□□ -1.23
UBR4-215ENST00000492606 MAST1Q9Y2H9 1570 aa7.37□□□□□ -1.23
UBR4-215ENST00000492606 PRDM15P57071 1507 aaPredicted RBP7.37□□□□□ -1.23
UBR4-215ENST00000492606 SPHKAPQ2M3C7 1700 aa7.37□□□□□ -1.23
UBR4-215ENST00000492606 KIF27Q86VH2 1401 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 SETD5Q9C0A6 1442 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 PNPLA6Q8IY17 1366 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 FAM83GA6ND36 823 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 PRKAR2AP13861 404 aaKnown RBP7.36□□□□□ -1.23
UBR4-215ENST00000492606 LTKP29376 864 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 EZH2Q15910 746 aaKnown RBP7.36□□□□□ -1.23
UBR4-215ENST00000492606 EFCAB2Q5VUJ9 269 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 JMYQ8N9B5 988 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 GJD4Q96KN9 370 aaPredicted RBP7.36□□□□□ -1.23
UBR4-215ENST00000492606 PCDHB8Q9UN66 801 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 PCDHB13Q9Y5F0 798 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 A2MP01023 1474 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 CAMSAP2Q08AD1 1489 aa7.36□□□□□ -1.23
UBR4-215ENST00000492606 GLI3P10071 1580 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms