RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 RAB3GAP2Q9H2M9 1393 aa17.6■□□□□ 0.41
PTPN7-214ENST00000491584 RPRD2Q5VT52 1461 aaKnown RBP17.58■□□□□ 0.41
PTPN7-214ENST00000491584 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.4
PTPN7-214ENST00000491584 GCC2Q8IWJ2 1684 aa17.58■□□□□ 0.4
PTPN7-214ENST00000491584 UNC13BO14795 1591 aa17.57■□□□□ 0.4
PTPN7-214ENST00000491584 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
PTPN7-214ENST00000491584 HDGFP51858 240 aaKnown RBP17.55■□□□□ 0.4
PTPN7-214ENST00000491584 IDI1Q13907 227 aa17.55■□□□□ 0.4
PTPN7-214ENST00000491584 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
PTPN7-214ENST00000491584 IQGAP3Q86VI3 1631 aa17.51■□□□□ 0.39
PTPN7-214ENST00000491584 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
PTPN7-214ENST00000491584 EID1Q9Y6B2 187 aa17.51■□□□□ 0.39
PTPN7-214ENST00000491584 ZFYVE9O95405 1425 aa17.5■□□□□ 0.39
PTPN7-214ENST00000491584 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
PTPN7-214ENST00000491584 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
PTPN7-214ENST00000491584 CHGAP10645 457 aaKnown RBP17.49■□□□□ 0.39
PTPN7-214ENST00000491584 TMEM94Q12767 1356 aa17.49■□□□□ 0.39
PTPN7-214ENST00000491584 NKTRP30414 1462 aaKnown RBP17.48■□□□□ 0.39
PTPN7-214ENST00000491584 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
PTPN7-214ENST00000491584 KCNA6P17658 529 aa17.47■□□□□ 0.39
PTPN7-214ENST00000491584 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
PTPN7-214ENST00000491584 RGS17Q9UGC6 210 aaPredicted RBP17.46■□□□□ 0.39
PTPN7-214ENST00000491584 ROBO1Q9Y6N7 1651 aa17.45■□□□□ 0.38
PTPN7-214ENST00000491584 SLC26A8Q96RN1 970 aa17.44■□□□□ 0.38
PTPN7-214ENST00000491584 FOXD1Q16676 465 aa17.43■□□□□ 0.38
PTPN7-214ENST00000491584 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTPN7-214ENST00000491584 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
PTPN7-214ENST00000491584 E9PCH4 1651 aa17.42■□□□□ 0.38
PTPN7-214ENST00000491584 PLEKHG1Q9ULL1 1385 aa17.42■□□□□ 0.38
PTPN7-214ENST00000491584 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
PTPN7-214ENST00000491584 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
PTPN7-214ENST00000491584 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
PTPN7-214ENST00000491584 RIMS2Q9UQ26 1411 aa17.4■□□□□ 0.38
PTPN7-214ENST00000491584 CCDC144AA2RUR9 1427 aa17.39■□□□□ 0.38
PTPN7-214ENST00000491584 PPP1R15AO75807 674 aaPredicted RBP17.39■□□□□ 0.37
PTPN7-214ENST00000491584 BCANQ96GW7 911 aa17.38■□□□□ 0.37
PTPN7-214ENST00000491584 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
PTPN7-214ENST00000491584 PROSER2Q86WR7 435 aaPredicted RBP17.37■□□□□ 0.37
PTPN7-214ENST00000491584 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
PTPN7-214ENST00000491584 VGFO15240 615 aaPredicted RBP17.35■□□□□ 0.37
PTPN7-214ENST00000491584 DIP2AQ14689 1571 aa17.35■□□□□ 0.37
PTPN7-214ENST00000491584 COL16A1Q07092 1604 aaPredicted RBP17.34■□□□□ 0.37
PTPN7-214ENST00000491584 TRPM2O94759 1503 aa17.33■□□□□ 0.37
PTPN7-214ENST00000491584 NCOA3Q9Y6Q9 1424 aa17.33■□□□□ 0.36
PTPN7-214ENST00000491584 MSH6P52701 1360 aa17.33■□□□□ 0.36
PTPN7-214ENST00000491584 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
PTPN7-214ENST00000491584 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
PTPN7-214ENST00000491584 PHLPP1O60346 1717 aa17.33■□□□□ 0.36
PTPN7-214ENST00000491584 RGL3Q3MIN7 710 aa17.32■□□□□ 0.36
PTPN7-214ENST00000491584 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
PTPN7-214ENST00000491584 NRXN3Q9Y4C0 1643 aa17.31■□□□□ 0.36
PTPN7-214ENST00000491584 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
PTPN7-214ENST00000491584 SLAIN2Q9P270 581 aa17.3■□□□□ 0.36
PTPN7-214ENST00000491584 SPHKAPQ2M3C7 1700 aa17.29■□□□□ 0.36
PTPN7-214ENST00000491584 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-214ENST00000491584 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
PTPN7-214ENST00000491584 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
PTPN7-214ENST00000491584 AHDC1Q5TGY3 1603 aaPredicted RBP17.28■□□□□ 0.36
PTPN7-214ENST00000491584 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.35
PTPN7-214ENST00000491584 LRP6O75581 1613 aa17.26■□□□□ 0.35
PTPN7-214ENST00000491584 SETBP1Q9Y6X0 1596 aa17.26■□□□□ 0.35
PTPN7-214ENST00000491584 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
PTPN7-214ENST00000491584 JCADQ9P266 1359 aa17.26■□□□□ 0.35
PTPN7-214ENST00000491584 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
PTPN7-214ENST00000491584 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-214ENST00000491584 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-214ENST00000491584 SHPRHQ149N8 1683 aa17.23■□□□□ 0.35
PTPN7-214ENST00000491584 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
PTPN7-214ENST00000491584 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
PTPN7-214ENST00000491584 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
PTPN7-214ENST00000491584 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
PTPN7-214ENST00000491584 DCCP43146 1447 aa17.2■□□□□ 0.34
PTPN7-214ENST00000491584 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
PTPN7-214ENST00000491584 KIF1BO60333 1816 aa17.19■□□□□ 0.34
PTPN7-214ENST00000491584 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
PTPN7-214ENST00000491584 KDM2AQ9Y2K7 1162 aa17.19■□□□□ 0.34
PTPN7-214ENST00000491584 NEXMIFQ5QGS0 1516 aa17.19■□□□□ 0.34
PTPN7-214ENST00000491584 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
PTPN7-214ENST00000491584 SIN3AQ96ST3 1273 aa17.18■□□□□ 0.34
PTPN7-214ENST00000491584 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
PTPN7-214ENST00000491584 NHSL1Q5SYE7 1610 aa17.17■□□□□ 0.34
PTPN7-214ENST00000491584 ASXL1Q8IXJ9 1541 aa17.16■□□□□ 0.34
PTPN7-214ENST00000491584 METP08581 1390 aa17.16■□□□□ 0.34
PTPN7-214ENST00000491584 MST1RQ04912 1400 aa17.16■□□□□ 0.34
PTPN7-214ENST00000491584 SPATA31A6Q5VVP1 1343 aa17.16■□□□□ 0.34
PTPN7-214ENST00000491584 BRINP3Q76B58 766 aa17.15■□□□□ 0.34
PTPN7-214ENST00000491584 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
PTPN7-214ENST00000491584 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
PTPN7-214ENST00000491584 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
PTPN7-214ENST00000491584 ATF3P18847 181 aa17.12■□□□□ 0.33
PTPN7-214ENST00000491584 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
PTPN7-214ENST00000491584 L3MBTL2Q969R5 705 aa17.12■□□□□ 0.33
PTPN7-214ENST00000491584 ADGRF5Q8IZF2 1346 aa17.12■□□□□ 0.33
PTPN7-214ENST00000491584 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
PTPN7-214ENST00000491584 C14orf93Q9H972 538 aaKnown RBP17.1■□□□□ 0.33
PTPN7-214ENST00000491584 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
PTPN7-214ENST00000491584 LAMC1P11047 1609 aa17.09■□□□□ 0.33
PTPN7-214ENST00000491584 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
PTPN7-214ENST00000491584 MYOM2P54296 1465 aa17.05■□□□□ 0.32
PTPN7-214ENST00000491584 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms