RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 MAST1Q9Y2H9 1570 aa12.8□□□□□ -0.36
CNOT4-210ENST00000491203 ATP7AQ04656 1500 aa12.79□□□□□ -0.36
CNOT4-210ENST00000491203 ZFYVE16Q7Z3T8 1539 aa12.79□□□□□ -0.36
CNOT4-210ENST00000491203 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
CNOT4-210ENST00000491203 PTPRKQ15262 1439 aa12.79□□□□□ -0.36
CNOT4-210ENST00000491203 INO80Q9ULG1 1556 aaPredicted RBP12.78□□□□□ -0.36
CNOT4-210ENST00000491203 ANKRD30AQ9BXX3 1397 aa12.78□□□□□ -0.36
CNOT4-210ENST00000491203 YEATS2Q9ULM3 1422 aa12.78□□□□□ -0.36
CNOT4-210ENST00000491203 KIDINS220Q9ULH0 1771 aa12.77□□□□□ -0.36
CNOT4-210ENST00000491203 CABP2Q9NPB3 220 aa12.77□□□□□ -0.37
CNOT4-210ENST00000491203 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
CNOT4-210ENST00000491203 RRP7BPQ9NSQ0 103 aa12.76□□□□□ -0.37
CNOT4-210ENST00000491203 ROCK1Q13464 1354 aa12.76□□□□□ -0.37
CNOT4-210ENST00000491203 ADGRL2O95490 1459 aa12.76□□□□□ -0.37
CNOT4-210ENST00000491203 ARHGEF40Q8TER5 1519 aa12.76□□□□□ -0.37
CNOT4-210ENST00000491203 ADGBQ8N7X0 1667 aa12.75□□□□□ -0.37
CNOT4-210ENST00000491203 KIF15Q9NS87 1388 aa12.75□□□□□ -0.37
CNOT4-210ENST00000491203 ABCA6Q8N139 1617 aa12.74□□□□□ -0.37
CNOT4-210ENST00000491203 PLXNC1O60486 1568 aa12.74□□□□□ -0.37
CNOT4-210ENST00000491203 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
CNOT4-210ENST00000491203 ATP10AO60312 1499 aa12.74□□□□□ -0.37
CNOT4-210ENST00000491203 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
CNOT4-210ENST00000491203 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
CNOT4-210ENST00000491203 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.371e-8■□□□□ 10.8
CNOT4-210ENST00000491203 A2MP01023 1474 aa12.72□□□□□ -0.37
CNOT4-210ENST00000491203 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
CNOT4-210ENST00000491203 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
CNOT4-210ENST00000491203 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.37
CNOT4-210ENST00000491203 DUOX2Q9NRD8 1548 aa12.71□□□□□ -0.38
CNOT4-210ENST00000491203 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
CNOT4-210ENST00000491203 REREQ9P2R6 1566 aa12.69□□□□□ -0.38
CNOT4-210ENST00000491203 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
CNOT4-210ENST00000491203 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
CNOT4-210ENST00000491203 ANKRD50Q9ULJ7 1429 aa12.69□□□□□ -0.38
CNOT4-210ENST00000491203 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-210ENST00000491203 POTEMA6NI47 508 aa12.68□□□□□ -0.38
CNOT4-210ENST00000491203 PKD2Q13563 968 aa12.68□□□□□ -0.38
CNOT4-210ENST00000491203 ZFP91Q96JP5 570 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-210ENST00000491203 NAIPQ13075 1403 aa12.68□□□□□ -0.38
CNOT4-210ENST00000491203 ERBINQ96RT1 1412 aa12.68□□□□□ -0.38
CNOT4-210ENST00000491203 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
CNOT4-210ENST00000491203 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
CNOT4-210ENST00000491203 AGLP35573 1532 aa12.67□□□□□ -0.38
CNOT4-210ENST00000491203 KIF3BO15066 747 aa12.66□□□□□ -0.38
CNOT4-210ENST00000491203 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
CNOT4-210ENST00000491203 SETD5Q9C0A6 1442 aa12.65□□□□□ -0.38
CNOT4-210ENST00000491203 GCC2Q8IWJ2 1684 aa12.65□□□□□ -0.38
CNOT4-210ENST00000491203 PCGF6Q9BYE7 350 aa12.65□□□□□ -0.38
CNOT4-210ENST00000491203 EIF2AK4Q9P2K8 1649 aaKnown RBP12.64□□□□□ -0.39
CNOT4-210ENST00000491203 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
CNOT4-210ENST00000491203 SIGLEC1Q9BZZ2 1709 aa12.63□□□□□ -0.39
CNOT4-210ENST00000491203 MLECQ14165 292 aa12.63□□□□□ -0.39
CNOT4-210ENST00000491203 GGT6Q6P531 493 aa12.63□□□□□ -0.39
CNOT4-210ENST00000491203 BCORL1Q5H9F3 1711 aa12.61□□□□□ -0.39
CNOT4-210ENST00000491203 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
CNOT4-210ENST00000491203 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
CNOT4-210ENST00000491203 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
CNOT4-210ENST00000491203 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
CNOT4-210ENST00000491203 RNF17Q9BXT8 1623 aaKnown RBP12.59□□□□□ -0.39
CNOT4-210ENST00000491203 KANK1Q14678 1352 aa12.59□□□□□ -0.39
CNOT4-210ENST00000491203 TRIM52Q96A61 297 aa12.59□□□□□ -0.39
CNOT4-210ENST00000491203 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
CNOT4-210ENST00000491203 HRCP23327 699 aa12.58□□□□□ -0.4
CNOT4-210ENST00000491203 ESF1Q9H501 851 aaKnown RBP12.58□□□□□ -0.4
CNOT4-210ENST00000491203 UNC13BO14795 1591 aa12.57□□□□□ -0.4
CNOT4-210ENST00000491203 RGL2O15211 777 aa12.57□□□□□ -0.4
CNOT4-210ENST00000491203 MS4A4AQ96JQ5 239 aa12.57□□□□□ -0.4
CNOT4-210ENST00000491203 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
CNOT4-210ENST00000491203 WASHC2CQ9Y4E1 1318 aa12.57□□□□□ -0.4
CNOT4-210ENST00000491203 PRDM15P57071 1507 aaPredicted RBP12.57□□□□□ -0.4
CNOT4-210ENST00000491203 NUP155O75694 1391 aa12.56□□□□□ -0.4
CNOT4-210ENST00000491203 MROH1Q8NDA8 1641 aa12.56□□□□□ -0.4
CNOT4-210ENST00000491203 ST18O60284 1047 aa12.55□□□□□ -0.4
CNOT4-210ENST00000491203 FAM135AQ9P2D6 1515 aa12.55□□□□□ -0.4
CNOT4-210ENST00000491203 KDM5DQ9BY66 1539 aa12.54□□□□□ -0.4
CNOT4-210ENST00000491203 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-210ENST00000491203 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
CNOT4-210ENST00000491203 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
CNOT4-210ENST00000491203 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
CNOT4-210ENST00000491203 ABCC3O15438 1527 aa12.53□□□□□ -0.4
CNOT4-210ENST00000491203 VWDEQ8N2E2 1590 aa12.53□□□□□ -0.4
CNOT4-210ENST00000491203 TMEM121BQ9BXQ6 578 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-210ENST00000491203 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-210ENST00000491203 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
CNOT4-210ENST00000491203 FER1L4A9Z1Z3 1794 aa12.52□□□□□ -0.41
CNOT4-210ENST00000491203 PHF8Q9UPP1 1060 aa12.52□□□□□ -0.41
CNOT4-210ENST00000491203 LMTK2Q8IWU2 1503 aa12.52□□□□□ -0.41
CNOT4-210ENST00000491203 IQGAP3Q86VI3 1631 aa12.51□□□□□ -0.41
CNOT4-210ENST00000491203 MADDQ8WXG6 1647 aa12.51□□□□□ -0.41
CNOT4-210ENST00000491203 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
CNOT4-210ENST00000491203 SOX12O15370 315 aa12.51□□□□□ -0.41
CNOT4-210ENST00000491203 CLTCQ00610 1675 aaKnown RBP12.51□□□□□ -0.41
CNOT4-210ENST00000491203 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
CNOT4-210ENST00000491203 PZPP20742 1482 aa12.5□□□□□ -0.41
CNOT4-210ENST00000491203 CEP152O94986 1710 aa12.5□□□□□ -0.41
CNOT4-210ENST00000491203 RIMS1Q86UR5 1692 aaKnown RBP12.49□□□□□ -0.41
CNOT4-210ENST00000491203 ZMYM3Q14202 1370 aa12.49□□□□□ -0.41
CNOT4-210ENST00000491203 KDM4FA0A1W2PPD8 638 aa12.49□□□□□ -0.41
CNOT4-210ENST00000491203 TET3O43151 1660 aa12.48□□□□□ -0.41
CNOT4-210ENST00000491203 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms