RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
SRSF4-204ENST00000489898 NKTRP30414 1462 aaKnown RBP18.27■□□□□ 0.52
SRSF4-204ENST00000489898 IFT172Q9UG01 1749 aa18.27■□□□□ 0.52
SRSF4-204ENST00000489898 SETBP1Q9Y6X0 1596 aa18.26■□□□□ 0.51
SRSF4-204ENST00000489898 ADAMTS13Q76LX8 1427 aa18.26■□□□□ 0.51
SRSF4-204ENST00000489898 PPLO60437 1756 aa18.25■□□□□ 0.51
SRSF4-204ENST00000489898 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
SRSF4-204ENST00000489898 RIMS2Q9UQ26 1411 aa18.24■□□□□ 0.51
SRSF4-204ENST00000489898 PLEKHG1Q9ULL1 1385 aa18.23■□□□□ 0.51
SRSF4-204ENST00000489898 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
SRSF4-204ENST00000489898 NUP155O75694 1391 aa18.22■□□□□ 0.51
SRSF4-204ENST00000489898 TXNDC2Q86VQ3 553 aa18.21■□□□□ 0.51
SRSF4-204ENST00000489898 SLC52A1Q9NWF4 448 aa18.21■□□□□ 0.51
SRSF4-204ENST00000489898 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
SRSF4-204ENST00000489898 NALCNQ8IZF0 1738 aa18.18■□□□□ 0.5
SRSF4-204ENST00000489898 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.18■□□□□ 0.5
SRSF4-204ENST00000489898 ITGAEP38570 1179 aa18.17■□□□□ 0.5
SRSF4-204ENST00000489898 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
SRSF4-204ENST00000489898 TMEM94Q12767 1356 aa18.13■□□□□ 0.49
SRSF4-204ENST00000489898 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
SRSF4-204ENST00000489898 SLC26A8Q96RN1 970 aa18.11■□□□□ 0.49
SRSF4-204ENST00000489898 EID1Q9Y6B2 187 aa18.11■□□□□ 0.49
SRSF4-204ENST00000489898 HSPA1LP34931 641 aa18.1■□□□□ 0.49
SRSF4-204ENST00000489898 ILDR2Q71H61 639 aa18.08■□□□□ 0.48
SRSF4-204ENST00000489898 ASXL1Q8IXJ9 1541 aa18.08■□□□□ 0.48
SRSF4-204ENST00000489898 PRAG1Q86YV5 1406 aa18.07■□□□□ 0.48
SRSF4-204ENST00000489898 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
SRSF4-204ENST00000489898 KCNA6P17658 529 aa18.07■□□□□ 0.48
SRSF4-204ENST00000489898 NHSL1Q5SYE7 1610 aa18.07■□□□□ 0.48
SRSF4-204ENST00000489898 STAG3Q9UJ98 1225 aa18.06■□□□□ 0.48
SRSF4-204ENST00000489898 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
SRSF4-204ENST00000489898 PIK3R4Q99570 1358 aa18.05■□□□□ 0.48
SRSF4-204ENST00000489898 AHDC1Q5TGY3 1603 aaPredicted RBP18.05■□□□□ 0.48
SRSF4-204ENST00000489898 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
SRSF4-204ENST00000489898 TOM1O60784 492 aa18.04■□□□□ 0.48
SRSF4-204ENST00000489898 FAM135BQ49AJ0 1406 aa18.04■□□□□ 0.48
SRSF4-204ENST00000489898 LAMC1P11047 1609 aa18.03■□□□□ 0.48
SRSF4-204ENST00000489898 PIP4K2BP78356 416 aa18.03■□□□□ 0.48
SRSF4-204ENST00000489898 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
SRSF4-204ENST00000489898 SHPRHQ149N8 1683 aa18.02■□□□□ 0.47
SRSF4-204ENST00000489898 NCOA3Q9Y6Q9 1424 aa18.01■□□□□ 0.47
SRSF4-204ENST00000489898 NUTM2DQ5VT03 806 aaPredicted RBP18.01■□□□□ 0.47
SRSF4-204ENST00000489898 RBM33Q96EV2 1170 aaKnown RBP18.01■□□□□ 0.47
SRSF4-204ENST00000489898 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
SRSF4-204ENST00000489898 METP08581 1390 aa18■□□□□ 0.47
SRSF4-204ENST00000489898 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
SRSF4-204ENST00000489898 DCCP43146 1447 aa17.97■□□□□ 0.47
SRSF4-204ENST00000489898 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
SRSF4-204ENST00000489898 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
SRSF4-204ENST00000489898 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
SRSF4-204ENST00000489898 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
SRSF4-204ENST00000489898 NRXN1Q9ULB1 1477 aa17.94■□□□□ 0.46
SRSF4-204ENST00000489898 MSH6P52701 1360 aa17.93■□□□□ 0.46
SRSF4-204ENST00000489898 MST1RQ04912 1400 aa17.93■□□□□ 0.46
SRSF4-204ENST00000489898 ADGRL3Q9HAR2 1447 aa17.93■□□□□ 0.46
SRSF4-204ENST00000489898 PPP1R15AO75807 674 aaPredicted RBP17.93■□□□□ 0.46
SRSF4-204ENST00000489898 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
SRSF4-204ENST00000489898 CDC42BPGQ6DT37 1551 aa17.91■□□□□ 0.46
SRSF4-204ENST00000489898 LRP6O75581 1613 aa17.91■□□□□ 0.46
SRSF4-204ENST00000489898 PIK3C2GO75747 1445 aa17.9■□□□□ 0.46
SRSF4-204ENST00000489898 FOXD1Q16676 465 aa17.9■□□□□ 0.46
SRSF4-204ENST00000489898 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.46
SRSF4-204ENST00000489898 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
SRSF4-204ENST00000489898 TECPR2O15040 1411 aa17.89■□□□□ 0.45
SRSF4-204ENST00000489898 FMN2Q9NZ56 1722 aa17.88■□□□□ 0.45
SRSF4-204ENST00000489898 MYOM2P54296 1465 aa17.88■□□□□ 0.45
SRSF4-204ENST00000489898 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
SRSF4-204ENST00000489898 ROBO2Q9HCK4 1378 aa17.87■□□□□ 0.45
SRSF4-204ENST00000489898 CCDC144AA2RUR9 1427 aa17.87■□□□□ 0.45
SRSF4-204ENST00000489898 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
SRSF4-204ENST00000489898 RGPD8O14715 1765 aaPredicted RBP17.85■□□□□ 0.45
SRSF4-204ENST00000489898 HDGFP51858 240 aaKnown RBP17.85■□□□□ 0.45
SRSF4-204ENST00000489898 RGS17Q9UGC6 210 aaPredicted RBP17.84■□□□□ 0.45
SRSF4-204ENST00000489898 ADGRB1O14514 1584 aa17.83■□□□□ 0.45
SRSF4-204ENST00000489898 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
SRSF4-204ENST00000489898 COL22A1Q8NFW1 1626 aaPredicted RBP17.83■□□□□ 0.44
SRSF4-204ENST00000489898 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
SRSF4-204ENST00000489898 SLAIN2Q9P270 581 aa17.82■□□□□ 0.44
SRSF4-204ENST00000489898 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
SRSF4-204ENST00000489898 USP32Q8NFA0 1604 aa17.81■□□□□ 0.44
SRSF4-204ENST00000489898 BCANQ96GW7 911 aa17.81■□□□□ 0.44
SRSF4-204ENST00000489898 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
SRSF4-204ENST00000489898 SOCS7O14512 581 aa17.8■□□□□ 0.44
SRSF4-204ENST00000489898 ZNF326Q5BKZ1 582 aaKnown RBP17.8■□□□□ 0.44
SRSF4-204ENST00000489898 ARHGEF28Q8N1W1 1705 aaKnown RBP17.8■□□□□ 0.44
SRSF4-204ENST00000489898 MARF1Q9Y4F3 1742 aaKnown RBP17.8■□□□□ 0.44
SRSF4-204ENST00000489898 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
SRSF4-204ENST00000489898 C1orf167Q5SNV9 1468 aa17.78■□□□□ 0.44
SRSF4-204ENST00000489898 C19orf44Q9H6X5 657 aa17.78■□□□□ 0.44
SRSF4-204ENST00000489898 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
SRSF4-204ENST00000489898 ANKRD30BQ9BXX2 1392 aa17.78■□□□□ 0.44
SRSF4-204ENST00000489898 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
SRSF4-204ENST00000489898 JCADQ9P266 1359 aa17.76■□□□□ 0.43
SRSF4-204ENST00000489898 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
SRSF4-204ENST00000489898 CADPS2Q86UW7 1296 aa17.74■□□□□ 0.43
SRSF4-204ENST00000489898 KIF1AQ12756 1690 aa17.74■□□□□ 0.43
SRSF4-204ENST00000489898 PLEKHH1Q9ULM0 1364 aa17.73■□□□□ 0.43
SRSF4-204ENST00000489898 PXDNQ92626 1479 aa17.73■□□□□ 0.43
SRSF4-204ENST00000489898 KIAA1210Q9ULL0 1709 aa17.72■□□□□ 0.43
SRSF4-204ENST00000489898 LRPPRCP42704 1394 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms