RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 NRXN1Q9ULB1 1477 aa9.8□□□□□ -0.84
PDAP1-203ENST00000488214 TNRQ92752 1358 aa9.8□□□□□ -0.84
PDAP1-203ENST00000488214 USP47Q96K76 1375 aa9.8□□□□□ -0.84
PDAP1-203ENST00000488214 FBXO31Q5XUX0 539 aaPredicted RBP9.8□□□□□ -0.84
PDAP1-203ENST00000488214 HIRIP3Q9BW71 556 aaPredicted RBP9.79□□□□□ -0.84
PDAP1-203ENST00000488214 ZNF142P52746 1687 aaPredicted RBP9.79□□□□□ -0.84
PDAP1-203ENST00000488214 HSPA5P11021 654 aaKnown RBP9.78□□□□□ -0.84
PDAP1-203ENST00000488214 SLC52A1Q9NWF4 448 aa9.78□□□□□ -0.84
PDAP1-203ENST00000488214 PIK3C2GO75747 1445 aa9.78□□□□□ -0.84
PDAP1-203ENST00000488214 SETBP1Q9Y6X0 1596 aa9.78□□□□□ -0.84
PDAP1-203ENST00000488214 A2ML1A8K2U0 1454 aa9.78□□□□□ -0.84
PDAP1-203ENST00000488214 GPRASP1Q5JY77 1395 aa9.77□□□□□ -0.84
PDAP1-203ENST00000488214 EIF4G2P78344 907 aaKnown RBP eCLIP9.77□□□□□ -0.85
PDAP1-203ENST00000488214 PLPPR3Q6T4P5 718 aa9.77□□□□□ -0.85
PDAP1-203ENST00000488214 NLRP1Q9C000 1473 aa9.77□□□□□ -0.85
PDAP1-203ENST00000488214 SETD1AO15047 1707 aaKnown RBP9.76□□□□□ -0.85
PDAP1-203ENST00000488214 ARHGEF28Q8N1W1 1705 aaKnown RBP9.76□□□□□ -0.85
PDAP1-203ENST00000488214 CEP170BQ9Y4F5 1589 aaPredicted RBP9.76□□□□□ -0.85
PDAP1-203ENST00000488214 IDI1Q13907 227 aa9.76□□□□□ -0.85
PDAP1-203ENST00000488214 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
PDAP1-203ENST00000488214 STAG3Q9UJ98 1225 aa9.76□□□□□ -0.85
PDAP1-203ENST00000488214 QRICH2Q9H0J4 1663 aa9.76□□□□□ -0.85
PDAP1-203ENST00000488214 RPGRIP1LQ68CZ1 1315 aa9.75□□□□□ -0.85
PDAP1-203ENST00000488214 ADGRF5Q8IZF2 1346 aa9.75□□□□□ -0.85
PDAP1-203ENST00000488214 NRXN3Q9Y4C0 1643 aa9.74□□□□□ -0.85
PDAP1-203ENST00000488214 RIMS2Q9UQ26 1411 aa9.74□□□□□ -0.85
PDAP1-203ENST00000488214 ASXL1Q8IXJ9 1541 aa9.74□□□□□ -0.85
PDAP1-203ENST00000488214 DIEXFQ68CQ4 756 aaKnown RBP9.74□□□□□ -0.85
PDAP1-203ENST00000488214 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
PDAP1-203ENST00000488214 ADGRB1O14514 1584 aa9.74□□□□□ -0.85
PDAP1-203ENST00000488214 SCAF11Q99590 1463 aaKnown RBP9.73□□□□□ -0.85
PDAP1-203ENST00000488214 CEBPAP49715 358 aaPredicted RBP9.73□□□□□ -0.85
PDAP1-203ENST00000488214 NUTM2DQ5VT03 806 aaPredicted RBP9.73□□□□□ -0.85
PDAP1-203ENST00000488214 ZFYVE9O95405 1425 aa9.73□□□□□ -0.85
PDAP1-203ENST00000488214 NBPF1Q3BBV0 1214 aa9.72□□□□□ -0.85
PDAP1-203ENST00000488214 EIF3AQ14152 1382 aaKnown RBP9.72□□□□□ -0.85
PDAP1-203ENST00000488214 ALKQ9UM73 1620 aa9.71□□□□□ -0.86
PDAP1-203ENST00000488214 KNDC1Q76NI1 1749 aa9.7□□□□□ -0.86
PDAP1-203ENST00000488214 CCDC7Q96M83 1385 aa9.7□□□□□ -0.86
PDAP1-203ENST00000488214 PTPRMP28827 1452 aa9.7□□□□□ -0.86
PDAP1-203ENST00000488214 SLIT1O75093 1534 aa9.7□□□□□ -0.86
PDAP1-203ENST00000488214 VGFO15240 615 aaPredicted RBP9.69□□□□□ -0.86
PDAP1-203ENST00000488214 MYOM1P52179 1685 aa9.69□□□□□ -0.86
PDAP1-203ENST00000488214 CFAP70Q5T0N1 1121 aa9.69□□□□□ -0.86
PDAP1-203ENST00000488214 TMEM2Q9UHN6 1383 aa9.68□□□□□ -0.86
PDAP1-203ENST00000488214 WASHC2AQ641Q2 1341 aa9.68□□□□□ -0.86
PDAP1-203ENST00000488214 SETD1BQ9UPS6 1966 aaKnown RBP9.68□□□□□ -0.86
PDAP1-203ENST00000488214 ARHGAP23Q9P227 1491 aa9.67□□□□□ -0.86
PDAP1-203ENST00000488214 KIF7Q2M1P5 1343 aa9.67□□□□□ -0.86
PDAP1-203ENST00000488214 ST20-MTHFSA0A0A6YYL1 179 aa9.67□□□□□ -0.86
PDAP1-203ENST00000488214 DIP2AQ14689 1571 aa9.67□□□□□ -0.86
PDAP1-203ENST00000488214 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
PDAP1-203ENST00000488214 C14orf93Q9H972 538 aaKnown RBP9.66□□□□□ -0.86
PDAP1-203ENST00000488214 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
PDAP1-203ENST00000488214 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
PDAP1-203ENST00000488214 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDAP1-203ENST00000488214 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
PDAP1-203ENST00000488214 CPS1P31327 1500 aa9.64□□□□□ -0.87
PDAP1-203ENST00000488214 YTHDC2Q9H6S0 1430 aaKnown RBP9.64□□□□□ -0.87
PDAP1-203ENST00000488214 PLEKHG1Q9ULL1 1385 aa9.63□□□□□ -0.87
PDAP1-203ENST00000488214 DLC1Q96QB1 1528 aa9.63□□□□□ -0.87
PDAP1-203ENST00000488214 TMEM132EQ6IEE7 984 aa9.63□□□□□ -0.87
PDAP1-203ENST00000488214 TULP4Q9NRJ4 1543 aa9.62□□□□□ -0.87
PDAP1-203ENST00000488214 BCANQ96GW7 911 aa9.62□□□□□ -0.87
PDAP1-203ENST00000488214 TESK2Q96S53 571 aa9.62□□□□□ -0.87
PDAP1-203ENST00000488214 ADAMTS13Q76LX8 1427 aa9.62□□□□□ -0.87
PDAP1-203ENST00000488214 XRN1Q8IZH2 1706 aaKnown RBP9.62□□□□□ -0.87
PDAP1-203ENST00000488214 CENPJQ9HC77 1338 aaPredicted RBP9.61□□□□□ -0.87
PDAP1-203ENST00000488214 HDGFP51858 240 aaKnown RBP9.61□□□□□ -0.87
PDAP1-203ENST00000488214 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
PDAP1-203ENST00000488214 SBNO2Q9Y2G9 1366 aa9.61□□□□□ -0.87
PDAP1-203ENST00000488214 TMF1P82094 1093 aa9.6□□□□□ -0.87
PDAP1-203ENST00000488214 THEMISQ8N1K5 641 aaPredicted RBP9.6□□□□□ -0.87
PDAP1-203ENST00000488214 STK26Q9P289 416 aa9.6□□□□□ -0.87
PDAP1-203ENST00000488214 EID1Q9Y6B2 187 aa9.6□□□□□ -0.87
PDAP1-203ENST00000488214 LRPPRCP42704 1394 aaKnown RBP9.6□□□□□ -0.87
PDAP1-203ENST00000488214 LTKP29376 864 aa9.59□□□□□ -0.87
PDAP1-203ENST00000488214 TXNDC2Q86VQ3 553 aa9.59□□□□□ -0.87
PDAP1-203ENST00000488214 METP08581 1390 aa9.59□□□□□ -0.87
PDAP1-203ENST00000488214 MED14O60244 1454 aa9.59□□□□□ -0.87
PDAP1-203ENST00000488214 TECPR2O15040 1411 aa9.58□□□□□ -0.88
PDAP1-203ENST00000488214 MIER1Q8N108 512 aa9.58□□□□□ -0.88
PDAP1-203ENST00000488214 CHD2O14647 1828 aaKnown RBP9.58□□□□□ -0.88
PDAP1-203ENST00000488214 ADGRB2O60241 1585 aa9.58□□□□□ -0.88
PDAP1-203ENST00000488214 ITSN1Q15811 1721 aa9.56□□□□□ -0.88
PDAP1-203ENST00000488214 SAFB2Q14151 953 aaKnown RBP eCLIP9.56□□□□□ -0.88
PDAP1-203ENST00000488214 CDCA8Q53HL2 280 aa9.56□□□□□ -0.88
PDAP1-203ENST00000488214 NALCNQ8IZF0 1738 aa9.56□□□□□ -0.88
PDAP1-203ENST00000488214 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.56□□□□□ -0.88
PDAP1-203ENST00000488214 PLEKHH1Q9ULM0 1364 aa9.55□□□□□ -0.88
PDAP1-203ENST00000488214 ANP32CO43423 234 aa9.55□□□□□ -0.88
PDAP1-203ENST00000488214 PRAM1Q96QH2 718 aa9.55□□□□□ -0.88
PDAP1-203ENST00000488214 POGKQ9P215 609 aa9.55□□□□□ -0.88
PDAP1-203ENST00000488214 NPHP4O75161 1426 aaPredicted RBP9.55□□□□□ -0.88
PDAP1-203ENST00000488214 PTCH1Q13635 1447 aa9.55□□□□□ -0.88
PDAP1-203ENST00000488214 PTPRUQ92729 1446 aa9.55□□□□□ -0.88
PDAP1-203ENST00000488214 TOPAZ1Q8N9V7 1692 aa9.55□□□□□ -0.88
PDAP1-203ENST00000488214 NWD1Q149M9 1564 aa9.54□□□□□ -0.88
PDAP1-203ENST00000488214 ABCC11Q96J66 1382 aa9.54□□□□□ -0.88
PDAP1-203ENST00000488214 USP32Q8NFA0 1604 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms