RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 PANK1Q8TE04 598 aa12.93□□□□□ -0.34
TMF1-203ENST00000488010 ZNF521Q96K83 1311 aa12.93□□□□□ -0.34
TMF1-203ENST00000488010 ABCA8O94911 1581 aa12.93□□□□□ -0.34
TMF1-203ENST00000488010 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
TMF1-203ENST00000488010 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
TMF1-203ENST00000488010 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
TMF1-203ENST00000488010 SAMD9LQ8IVG5 1584 aa12.92□□□□□ -0.34
TMF1-203ENST00000488010 SEC24BO95487 1268 aa12.92□□□□□ -0.34
TMF1-203ENST00000488010 CDCA8Q53HL2 280 aa12.91□□□□□ -0.34
TMF1-203ENST00000488010 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
TMF1-203ENST00000488010 ARHGEF5Q12774 1597 aa12.91□□□□□ -0.34
TMF1-203ENST00000488010 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
TMF1-203ENST00000488010 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
TMF1-203ENST00000488010 WDR7Q9Y4E6 1490 aa12.91□□□□□ -0.34
TMF1-203ENST00000488010 POGKQ9P215 609 aa12.9□□□□□ -0.34
TMF1-203ENST00000488010 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
TMF1-203ENST00000488010 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
TMF1-203ENST00000488010 E9PSI1 815 aa12.89□□□□□ -0.35
TMF1-203ENST00000488010 CENPJQ9HC77 1338 aaPredicted RBP12.89□□□□□ -0.35
TMF1-203ENST00000488010 NKTRP30414 1462 aaKnown RBP12.89□□□□□ -0.35
TMF1-203ENST00000488010 BECN1Q14457 450 aa12.88□□□□□ -0.35
TMF1-203ENST00000488010 BCL2L13Q9BXK5 485 aa12.88□□□□□ -0.35
TMF1-203ENST00000488010 EIF2AK4Q9P2K8 1649 aaKnown RBP12.88□□□□□ -0.35
TMF1-203ENST00000488010 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
TMF1-203ENST00000488010 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
TMF1-203ENST00000488010 NUP160Q12769 1436 aa12.87□□□□□ -0.35
TMF1-203ENST00000488010 EIF3AQ14152 1382 aaKnown RBP12.87□□□□□ -0.35
TMF1-203ENST00000488010 ASXL1Q8IXJ9 1541 aa12.86□□□□□ -0.35
TMF1-203ENST00000488010 USP19O94966 1318 aa12.86□□□□□ -0.35
TMF1-203ENST00000488010 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
TMF1-203ENST00000488010 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
TMF1-203ENST00000488010 CDC42BPBQ9Y5S2 1711 aa12.86□□□□□ -0.35
TMF1-203ENST00000488010 UPF2Q9HAU5 1272 aaKnown RBP12.85□□□□□ -0.35
TMF1-203ENST00000488010 TNNQ9UQP3 1299 aa12.84□□□□□ -0.35
TMF1-203ENST00000488010 LAMC1P11047 1609 aa12.84□□□□□ -0.35
TMF1-203ENST00000488010 MAPK8IP3Q9UPT6 1336 aa12.84□□□□□ -0.35
TMF1-203ENST00000488010 PIK3C2GO75747 1445 aa12.83□□□□□ -0.35
TMF1-203ENST00000488010 UNC13BO14795 1591 aa12.83□□□□□ -0.36
TMF1-203ENST00000488010 PREX2Q70Z35 1606 aa12.83□□□□□ -0.36
TMF1-203ENST00000488010 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
TMF1-203ENST00000488010 WWC1Q8IX03 1113 aa12.83□□□□□ -0.36
TMF1-203ENST00000488010 GZF1Q9H116 711 aaPredicted RBP12.83□□□□□ -0.36
TMF1-203ENST00000488010 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
TMF1-203ENST00000488010 SCAF11Q99590 1463 aaKnown RBP12.82□□□□□ -0.36
TMF1-203ENST00000488010 FAM43AQ8N2R8 423 aa12.81□□□□□ -0.36
TMF1-203ENST00000488010 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
TMF1-203ENST00000488010 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
TMF1-203ENST00000488010 IQGAP3Q86VI3 1631 aa12.8□□□□□ -0.36
TMF1-203ENST00000488010 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
TMF1-203ENST00000488010 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
TMF1-203ENST00000488010 RLBP1P12271 317 aa12.8□□□□□ -0.36
TMF1-203ENST00000488010 MORC1Q86VD1 984 aa12.79□□□□□ -0.36
TMF1-203ENST00000488010 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
TMF1-203ENST00000488010 SYNMO15061 1565 aa12.79□□□□□ -0.36
TMF1-203ENST00000488010 MAST1Q9Y2H9 1570 aa12.79□□□□□ -0.36
TMF1-203ENST00000488010 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
TMF1-203ENST00000488010 PMFBP1Q8TBY8 1022 aa12.78□□□□□ -0.36
TMF1-203ENST00000488010 DUOX2Q9NRD8 1548 aa12.78□□□□□ -0.36
TMF1-203ENST00000488010 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
TMF1-203ENST00000488010 RARSP54136 660 aaKnown RBP12.78□□□□□ -0.36
TMF1-203ENST00000488010 EFCAB2Q5VUJ9 269 aa12.78□□□□□ -0.36
TMF1-203ENST00000488010 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
TMF1-203ENST00000488010 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
TMF1-203ENST00000488010 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.36
TMF1-203ENST00000488010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.77□□□□□ -0.36
TMF1-203ENST00000488010 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
TMF1-203ENST00000488010 MADDQ8WXG6 1647 aa12.77□□□□□ -0.37
TMF1-203ENST00000488010 SPAG9O60271 1321 aaKnown RBP12.77□□□□□ -0.37
TMF1-203ENST00000488010 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
TMF1-203ENST00000488010 ATP10AO60312 1499 aa12.76□□□□□ -0.37
TMF1-203ENST00000488010 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
TMF1-203ENST00000488010 L1TD1Q5T7N2 865 aaKnown RBP12.76□□□□□ -0.37
TMF1-203ENST00000488010 RRAGDQ9NQL2 400 aaPredicted RBP12.75□□□□□ -0.37
TMF1-203ENST00000488010 TBC1D32Q96NH3 1257 aa12.75□□□□□ -0.37
TMF1-203ENST00000488010 RWDD1Q9H446 243 aaPredicted RBP12.75□□□□□ -0.37
TMF1-203ENST00000488010 ADGRF5Q8IZF2 1346 aa12.75□□□□□ -0.37
TMF1-203ENST00000488010 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
TMF1-203ENST00000488010 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
TMF1-203ENST00000488010 TRAPPC8Q9Y2L5 1435 aa12.74□□□□□ -0.37
TMF1-203ENST00000488010 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
TMF1-203ENST00000488010 NPC1L1Q9UHC9 1359 aa12.74□□□□□ -0.37
TMF1-203ENST00000488010 KIF3BO15066 747 aa12.74□□□□□ -0.37
TMF1-203ENST00000488010 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
TMF1-203ENST00000488010 ANTXR1Q9H6X2 564 aa12.74□□□□□ -0.37
TMF1-203ENST00000488010 TRAK1Q9UPV9 953 aa12.74□□□□□ -0.37
TMF1-203ENST00000488010 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
TMF1-203ENST00000488010 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
TMF1-203ENST00000488010 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
TMF1-203ENST00000488010 NINLQ9Y2I6 1382 aa12.73□□□□□ -0.37
TMF1-203ENST00000488010 NGEFQ8N5V2 710 aa12.72□□□□□ -0.37
TMF1-203ENST00000488010 MTHFSP49914 203 aa12.72□□□□□ -0.37
TMF1-203ENST00000488010 PANK2Q9BZ23 570 aa12.72□□□□□ -0.37
TMF1-203ENST00000488010 U2AF1L5P0DN76 240 aaPredicted RBP12.72□□□□□ -0.37
TMF1-203ENST00000488010 U2AF1Q01081 240 aaKnown RBP eCLIP12.72□□□□□ -0.37
TMF1-203ENST00000488010 KDM5AP29375 1690 aaKnown RBP12.71□□□□□ -0.37
TMF1-203ENST00000488010 MYOM1P52179 1685 aa12.71□□□□□ -0.37
TMF1-203ENST00000488010 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.37
TMF1-203ENST00000488010 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.37
TMF1-203ENST00000488010 ERVK-7P63135 1459 aa12.71□□□□□ -0.37
TMF1-203ENST00000488010 NLRP1Q9C000 1473 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms