RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
SFXN3-206ENST00000487721 SLIT1O75093 1534 aa18.13■□□□□ 0.49
SFXN3-206ENST00000487721 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
SFXN3-206ENST00000487721 MED1Q15648 1581 aaPredicted RBP18.12■□□□□ 0.49
SFXN3-206ENST00000487721 SYNMO15061 1565 aa18.1■□□□□ 0.49
SFXN3-206ENST00000487721 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
SFXN3-206ENST00000487721 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.09■□□□□ 0.49
SFXN3-206ENST00000487721 KCNA6P17658 529 aa18.08■□□□□ 0.48
SFXN3-206ENST00000487721 BCANQ96GW7 911 aa18.08■□□□□ 0.48
SFXN3-206ENST00000487721 SLC26A8Q96RN1 970 aa18.08■□□□□ 0.48
SFXN3-206ENST00000487721 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
SFXN3-206ENST00000487721 PIK3C2BO00750 1634 aa18.07■□□□□ 0.48
SFXN3-206ENST00000487721 ADGRB3O60242 1522 aa18.07■□□□□ 0.48
SFXN3-206ENST00000487721 E9PCH4 1651 aa18.06■□□□□ 0.48
SFXN3-206ENST00000487721 PROSER2Q86WR7 435 aaPredicted RBP18.06■□□□□ 0.48
SFXN3-206ENST00000487721 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
SFXN3-206ENST00000487721 HRCP23327 699 aa18.04■□□□□ 0.48
SFXN3-206ENST00000487721 ZNF326Q5BKZ1 582 aaKnown RBP18.04■□□□□ 0.48
SFXN3-206ENST00000487721 TMEM94Q12767 1356 aa18.04■□□□□ 0.48
SFXN3-206ENST00000487721 KDM5AP29375 1690 aaKnown RBP18.03■□□□□ 0.48
SFXN3-206ENST00000487721 RBM33Q96EV2 1170 aaKnown RBP18.03■□□□□ 0.48
SFXN3-206ENST00000487721 RIMS2Q9UQ26 1411 aa18.02■□□□□ 0.48
SFXN3-206ENST00000487721 FAM135BQ49AJ0 1406 aa18.01■□□□□ 0.47
SFXN3-206ENST00000487721 FOXD1Q16676 465 aa17.99■□□□□ 0.47
SFXN3-206ENST00000487721 TRPM2O94759 1503 aa17.98■□□□□ 0.47
SFXN3-206ENST00000487721 RGS17Q9UGC6 210 aaPredicted RBP17.98■□□□□ 0.47
SFXN3-206ENST00000487721 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
SFXN3-206ENST00000487721 ZFYVE9O95405 1425 aa17.97■□□□□ 0.47
SFXN3-206ENST00000487721 NUTM2DQ5VT03 806 aaPredicted RBP17.96■□□□□ 0.47
SFXN3-206ENST00000487721 TMEM131LA2VDJ0 1609 aa17.96■□□□□ 0.47
SFXN3-206ENST00000487721 CCDC144AA2RUR9 1427 aa17.96■□□□□ 0.47
SFXN3-206ENST00000487721 XIRP1Q702N8 1843 aaKnown RBP17.95■□□□□ 0.46
SFXN3-206ENST00000487721 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
SFXN3-206ENST00000487721 SLAIN2Q9P270 581 aa17.94■□□□□ 0.46
SFXN3-206ENST00000487721 RPGRIP1LQ68CZ1 1315 aa17.94■□□□□ 0.46
SFXN3-206ENST00000487721 VGFO15240 615 aaPredicted RBP17.93■□□□□ 0.46
SFXN3-206ENST00000487721 TRIM26Q12899 539 aaPredicted RBP17.93■□□□□ 0.46
SFXN3-206ENST00000487721 TBX22Q9Y458 520 aa17.93■□□□□ 0.46
SFXN3-206ENST00000487721 MSH6P52701 1360 aa17.91■□□□□ 0.46
SFXN3-206ENST00000487721 NKTRP30414 1462 aaKnown RBP17.89■□□□□ 0.45
SFXN3-206ENST00000487721 CLTCL1P53675 1640 aa17.89■□□□□ 0.45
SFXN3-206ENST00000487721 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
SFXN3-206ENST00000487721 POTEAQ6S8J7 498 aa17.87■□□□□ 0.45
SFXN3-206ENST00000487721 C14orf37Q86TY3 774 aa17.86■□□□□ 0.45
SFXN3-206ENST00000487721 NWD1Q149M9 1564 aa17.85■□□□□ 0.45
SFXN3-206ENST00000487721 ROBO1Q9Y6N7 1651 aa17.84■□□□□ 0.45
SFXN3-206ENST00000487721 PIK3R4Q99570 1358 aa17.84■□□□□ 0.45
SFXN3-206ENST00000487721 NCOA3Q9Y6Q9 1424 aa17.83■□□□□ 0.45
SFXN3-206ENST00000487721 C19orf44Q9H6X5 657 aa17.83■□□□□ 0.44
SFXN3-206ENST00000487721 ADAMTS13Q76LX8 1427 aa17.82■□□□□ 0.44
SFXN3-206ENST00000487721 ANKRD30BQ9BXX2 1392 aa17.82■□□□□ 0.44
SFXN3-206ENST00000487721 ATF3P18847 181 aa17.81■□□□□ 0.44
SFXN3-206ENST00000487721 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
SFXN3-206ENST00000487721 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
SFXN3-206ENST00000487721 DIP2AQ14689 1571 aa17.81■□□□□ 0.44
SFXN3-206ENST00000487721 KIF1BO60333 1816 aa17.81■□□□□ 0.44
SFXN3-206ENST00000487721 JCADQ9P266 1359 aa17.8■□□□□ 0.44
SFXN3-206ENST00000487721 MYO5BQ9ULV0 1848 aa17.8■□□□□ 0.44
SFXN3-206ENST00000487721 NEXMIFQ5QGS0 1516 aa17.8■□□□□ 0.44
SFXN3-206ENST00000487721 SPATA31E1Q6ZUB1 1445 aa17.8■□□□□ 0.44
SFXN3-206ENST00000487721 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
SFXN3-206ENST00000487721 SETBP1Q9Y6X0 1596 aa17.77■□□□□ 0.44
SFXN3-206ENST00000487721 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
SFXN3-206ENST00000487721 ADGRF5Q8IZF2 1346 aa17.74■□□□□ 0.43
SFXN3-206ENST00000487721 PHLPP1O60346 1717 aa17.74■□□□□ 0.43
SFXN3-206ENST00000487721 METP08581 1390 aa17.74■□□□□ 0.43
SFXN3-206ENST00000487721 SPATA31A6Q5VVP1 1343 aa17.73■□□□□ 0.43
SFXN3-206ENST00000487721 PTPRUQ92729 1446 aa17.73■□□□□ 0.43
SFXN3-206ENST00000487721 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
SFXN3-206ENST00000487721 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
SFXN3-206ENST00000487721 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
SFXN3-206ENST00000487721 DCAF11Q8TEB1 546 aa17.7■□□□□ 0.42
SFXN3-206ENST00000487721 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
SFXN3-206ENST00000487721 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.68■□□□□ 0.42
SFXN3-206ENST00000487721 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
SFXN3-206ENST00000487721 COL16A1Q07092 1604 aaPredicted RBP17.68■□□□□ 0.42
SFXN3-206ENST00000487721 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
SFXN3-206ENST00000487721 NUTM2BA6NNL0 878 aaPredicted RBP17.66■□□□□ 0.42
SFXN3-206ENST00000487721 NUTM2EB1AL46 878 aaPredicted RBP17.66■□□□□ 0.42
SFXN3-206ENST00000487721 NUTM2AQ8IVF1 878 aaPredicted RBP17.66■□□□□ 0.42
SFXN3-206ENST00000487721 C14orf93Q9H972 538 aaKnown RBP17.66■□□□□ 0.42
SFXN3-206ENST00000487721 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
SFXN3-206ENST00000487721 MYOM2P54296 1465 aa17.65■□□□□ 0.42
SFXN3-206ENST00000487721 STK26Q9P289 416 aa17.65■□□□□ 0.42
SFXN3-206ENST00000487721 PPLO60437 1756 aa17.65■□□□□ 0.42
SFXN3-206ENST00000487721 LRP6O75581 1613 aa17.65■□□□□ 0.42
SFXN3-206ENST00000487721 AHDC1Q5TGY3 1603 aaPredicted RBP17.64■□□□□ 0.41
SFXN3-206ENST00000487721 DCCP43146 1447 aa17.64■□□□□ 0.41
SFXN3-206ENST00000487721 CFAP70Q5T0N1 1121 aa17.63■□□□□ 0.41
SFXN3-206ENST00000487721 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
SFXN3-206ENST00000487721 LRRC59Q96AG4 307 aaKnown RBP17.63■□□□□ 0.41
SFXN3-206ENST00000487721 DHX57Q6P158 1386 aaKnown RBP17.63■□□□□ 0.41
SFXN3-206ENST00000487721 LRPPRCP42704 1394 aaKnown RBP17.62■□□□□ 0.41
SFXN3-206ENST00000487721 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
SFXN3-206ENST00000487721 RXRBP28702 533 aa17.61■□□□□ 0.41
SFXN3-206ENST00000487721 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
SFXN3-206ENST00000487721 MST1RQ04912 1400 aa17.61■□□□□ 0.41
SFXN3-206ENST00000487721 NRXN1Q9ULB1 1477 aa17.61■□□□□ 0.41
SFXN3-206ENST00000487721 DDX17Q92841 729 aaKnown RBP17.6■□□□□ 0.41
SFXN3-206ENST00000487721 ABCC11Q96J66 1382 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms