RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 NEXMIFQ5QGS0 1516 aa24.17■■□□□ 1.46
NF1-211ENST00000487476 THEMISQ8N1K5 641 aaPredicted RBP24.17■■□□□ 1.46
NF1-211ENST00000487476 RIMS2Q9UQ26 1411 aa24.16■■□□□ 1.46
NF1-211ENST00000487476 TMEM2Q9UHN6 1383 aa24.15■■□□□ 1.46
NF1-211ENST00000487476 ZFYVE9O95405 1425 aa24.13■■□□□ 1.45
NF1-211ENST00000487476 LTKP29376 864 aa24.13■■□□□ 1.45
NF1-211ENST00000487476 KDM5AP29375 1690 aaKnown RBP24.13■■□□□ 1.45
NF1-211ENST00000487476 PRAG1Q86YV5 1406 aa24.12■■□□□ 1.45
NF1-211ENST00000487476 VGFO15240 615 aaPredicted RBP24.12■■□□□ 1.45
NF1-211ENST00000487476 IFT172Q9UG01 1749 aa24.12■■□□□ 1.45
NF1-211ENST00000487476 PPLO60437 1756 aa24.12■■□□□ 1.45
NF1-211ENST00000487476 ZNF142P52746 1687 aaPredicted RBP24.11■■□□□ 1.45
NF1-211ENST00000487476 MYOM2P54296 1465 aa24.1■■□□□ 1.45
NF1-211ENST00000487476 STAC3Q96MF2 364 aa24.1■■□□□ 1.45
NF1-211ENST00000487476 TXNDC2Q86VQ3 553 aa24.09■■□□□ 1.45
NF1-211ENST00000487476 ARHGAP23Q9P227 1491 aa24.08■■□□□ 1.44
NF1-211ENST00000487476 NRXN1Q9ULB1 1477 aa24.07■■□□□ 1.44
NF1-211ENST00000487476 HSPA2P54652 639 aa24.07■■□□□ 1.44
NF1-211ENST00000487476 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.07■■□□□ 1.44
NF1-211ENST00000487476 SLIT1O75093 1534 aa24.07■■□□□ 1.44
NF1-211ENST00000487476 NBPF1Q3BBV0 1214 aa24.06■■□□□ 1.44
NF1-211ENST00000487476 CFAP70Q5T0N1 1121 aa24.05■■□□□ 1.44
NF1-211ENST00000487476 EID1Q9Y6B2 187 aa24.05■■□□□ 1.44
NF1-211ENST00000487476 HDGFP51858 240 aaKnown RBP24.05■■□□□ 1.44
NF1-211ENST00000487476 PIK3C2GO75747 1445 aa24.04■■□□□ 1.44
NF1-211ENST00000487476 LMTK3Q96Q04 1460 aa24.04■■□□□ 1.44
NF1-211ENST00000487476 ANKLE2Q86XL3 938 aa24.01■■□□□ 1.43
NF1-211ENST00000487476 BCANQ96GW7 911 aa24■■□□□ 1.43
NF1-211ENST00000487476 C14orf93Q9H972 538 aaKnown RBP24■■□□□ 1.43
NF1-211ENST00000487476 SCAF11Q99590 1463 aaKnown RBP23.99■■□□□ 1.43
NF1-211ENST00000487476 NCKAP5LQ9HCH0 1330 aa23.99■■□□□ 1.43
NF1-211ENST00000487476 RALGAPBQ86X10 1494 aa23.98■■□□□ 1.43
NF1-211ENST00000487476 ROCK2O75116 1388 aaKnown RBP23.98■■□□□ 1.43
NF1-211ENST00000487476 TMEM132EQ6IEE7 984 aa23.98■■□□□ 1.43
NF1-211ENST00000487476 TRPM1Q7Z4N2 1603 aa23.97■■□□□ 1.43
NF1-211ENST00000487476 PLEKHG1Q9ULL1 1385 aa23.97■■□□□ 1.43
NF1-211ENST00000487476 SLC26A8Q96RN1 970 aa23.95■■□□□ 1.43
NF1-211ENST00000487476 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.42
NF1-211ENST00000487476 NRXN3Q9Y4C0 1643 aa23.93■■□□□ 1.42
NF1-211ENST00000487476 ALKQ9UM73 1620 aa23.93■■□□□ 1.42
NF1-211ENST00000487476 ADAMTS13Q76LX8 1427 aa23.92■■□□□ 1.42
NF1-211ENST00000487476 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
NF1-211ENST00000487476 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
NF1-211ENST00000487476 HIRIP3Q9BW71 556 aaPredicted RBP23.9■■□□□ 1.42
NF1-211ENST00000487476 IQGAP1P46940 1657 aa23.9■■□□□ 1.42
NF1-211ENST00000487476 METP08581 1390 aa23.89■■□□□ 1.42
NF1-211ENST00000487476 ASXL1Q8IXJ9 1541 aa23.88■■□□□ 1.41
NF1-211ENST00000487476 ADGRB1O14514 1584 aa23.88■■□□□ 1.41
NF1-211ENST00000487476 KIAA1210Q9ULL0 1709 aa23.88■■□□□ 1.41
NF1-211ENST00000487476 NPHP4O75161 1426 aaPredicted RBP23.87■■□□□ 1.41
NF1-211ENST00000487476 MED14O60244 1454 aa23.86■■□□□ 1.41
NF1-211ENST00000487476 STK26Q9P289 416 aa23.86■■□□□ 1.41
NF1-211ENST00000487476 HSPA5P11021 654 aaKnown RBP23.85■■□□□ 1.41
NF1-211ENST00000487476 TBX22Q9Y458 520 aa23.85■■□□□ 1.41
NF1-211ENST00000487476 TRAK1Q9UPV9 953 aa23.84■■□□□ 1.41
NF1-211ENST00000487476 SETD1AO15047 1707 aaKnown RBP23.84■■□□□ 1.41
NF1-211ENST00000487476 USP47Q96K76 1375 aa23.84■■□□□ 1.41
NF1-211ENST00000487476 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
NF1-211ENST00000487476 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
NF1-211ENST00000487476 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.41
NF1-211ENST00000487476 LAMC1P11047 1609 aa23.83■■□□□ 1.41
NF1-211ENST00000487476 STRCQ7RTU9 1775 aa23.8■■□□□ 1.4
NF1-211ENST00000487476 YTHDC2Q9H6S0 1430 aaKnown RBP23.8■■□□□ 1.4
NF1-211ENST00000487476 ST20-MTHFSA0A0A6YYL1 179 aa23.8■■□□□ 1.4
NF1-211ENST00000487476 PTPRUQ92729 1446 aa23.79■■□□□ 1.4
NF1-211ENST00000487476 LRPPRCP42704 1394 aaKnown RBP23.76■■□□□ 1.39
NF1-211ENST00000487476 AMOTL2Q9Y2J4 779 aa23.75■■□□□ 1.39
NF1-211ENST00000487476 DIP2AQ14689 1571 aa23.75■■□□□ 1.39
NF1-211ENST00000487476 ABCC11Q96J66 1382 aa23.73■■□□□ 1.39
NF1-211ENST00000487476 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
NF1-211ENST00000487476 WAPLQ7Z5K2 1190 aa23.72■■□□□ 1.39
NF1-211ENST00000487476 PRAM1Q96QH2 718 aa23.71■■□□□ 1.39
NF1-211ENST00000487476 KCNA6P17658 529 aa23.71■■□□□ 1.39
NF1-211ENST00000487476 ROBO2Q9HCK4 1378 aa23.7■■□□□ 1.38
NF1-211ENST00000487476 PLEKHH1Q9ULM0 1364 aa23.69■■□□□ 1.38
NF1-211ENST00000487476 TESK2Q96S53 571 aa23.69■■□□□ 1.38
NF1-211ENST00000487476 EIF3AQ14152 1382 aaKnown RBP23.69■■□□□ 1.38
NF1-211ENST00000487476 PIK3R4Q99570 1358 aa23.69■■□□□ 1.38
NF1-211ENST00000487476 CENPJQ9HC77 1338 aaPredicted RBP23.68■■□□□ 1.38
NF1-211ENST00000487476 ZNF316A6NFI3 1004 aaPredicted RBP23.68■■□□□ 1.38
NF1-211ENST00000487476 C11orf95C9JLR9 678 aaPredicted RBP23.68■■□□□ 1.38
NF1-211ENST00000487476 POGKQ9P215 609 aa23.67■■□□□ 1.38
NF1-211ENST00000487476 TECPR2O15040 1411 aa23.67■■□□□ 1.38
NF1-211ENST00000487476 ARHGEF28Q8N1W1 1705 aaKnown RBP23.66■■□□□ 1.38
NF1-211ENST00000487476 RBM33Q96EV2 1170 aaKnown RBP23.64■■□□□ 1.38
NF1-211ENST00000487476 DLC1Q96QB1 1528 aa23.64■■□□□ 1.37
NF1-211ENST00000487476 CHD2O14647 1828 aaKnown RBP23.63■■□□□ 1.37
NF1-211ENST00000487476 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
NF1-211ENST00000487476 XRN1Q8IZH2 1706 aaKnown RBP23.62■■□□□ 1.37
NF1-211ENST00000487476 CPS1P31327 1500 aa23.62■■□□□ 1.37
NF1-211ENST00000487476 SIRT1Q96EB6 747 aa23.62■■□□□ 1.37
NF1-211ENST00000487476 MINK1Q8N4C8 1332 aaPredicted RBP23.62■■□□□ 1.37
NF1-211ENST00000487476 ZNF335Q9H4Z2 1342 aaPredicted RBP23.61■■□□□ 1.37
NF1-211ENST00000487476 FAM135BQ49AJ0 1406 aa23.61■■□□□ 1.37
NF1-211ENST00000487476 KNDC1Q76NI1 1749 aa23.6■■□□□ 1.37
NF1-211ENST00000487476 DISP3Q9P2K9 1392 aa23.59■■□□□ 1.37
NF1-211ENST00000487476 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
NF1-211ENST00000487476 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
NF1-211ENST00000487476 WASHC2AQ641Q2 1341 aa23.57■■□□□ 1.36
NF1-211ENST00000487476 STRCP1A6NGW2 1772 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms