RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 HDGFL1Q5TGJ6 251 aa8.5□□□□□ -1.05
KPNA1-208ENST00000485027 TBC1D2Q9BYX2 928 aa8.5□□□□□ -1.05
KPNA1-208ENST00000485027 MYH16Q9H6N6 1097 aa8.5□□□□□ -1.05
KPNA1-208ENST00000485027 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
KPNA1-208ENST00000485027 GPATCH3Q96I76 525 aa8.5□□□□□ -1.05
KPNA1-208ENST00000485027 EMILIN3Q9NT22 766 aa8.5□□□□□ -1.05
KPNA1-208ENST00000485027 TMUB1Q9BVT8 246 aa8.49□□□□□ -1.05
KPNA1-208ENST00000485027 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
KPNA1-208ENST00000485027 NLRP6P59044 892 aa8.48□□□□□ -1.05
KPNA1-208ENST00000485027 SF3A1Q15459 793 aaKnown RBP8.48□□□□□ -1.05
KPNA1-208ENST00000485027 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
KPNA1-208ENST00000485027 EFCAB3Q8N7B9 438 aa8.48□□□□□ -1.05
KPNA1-208ENST00000485027 PRDM10Q9NQV6 1147 aa8.48□□□□□ -1.05
KPNA1-208ENST00000485027 PCDHB8Q9UN66 801 aa8.48□□□□□ -1.05
KPNA1-208ENST00000485027 PCDHB13Q9Y5F0 798 aa8.48□□□□□ -1.05
KPNA1-208ENST00000485027 ERCC3P19447 782 aa8.47□□□□□ -1.05
KPNA1-208ENST00000485027 PPP1R12CQ9BZL4 782 aa8.47□□□□□ -1.05
KPNA1-208ENST00000485027 RECKO95980 971 aa8.47□□□□□ -1.05
KPNA1-208ENST00000485027 HIC1Q14526 733 aa8.47□□□□□ -1.05
KPNA1-208ENST00000485027 RSF1Q96T23 1441 aaPredicted RBP8.46□□□□□ -1.05
KPNA1-208ENST00000485027 WWC1Q8IX03 1113 aa8.46□□□□□ -1.06
KPNA1-208ENST00000485027 BEGAINQ9BUH8 593 aa8.46□□□□□ -1.06
KPNA1-208ENST00000485027 KLHL42Q9P2K6 505 aa8.46□□□□□ -1.06
KPNA1-208ENST00000485027 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.46□□□□□ -1.06
KPNA1-208ENST00000485027 SBNO2Q9Y2G9 1366 aa8.45□□□□□ -1.06
KPNA1-208ENST00000485027 MYSM1Q5VVJ2 828 aa8.45□□□□□ -1.06
KPNA1-208ENST00000485027 VTI1AQ96AJ9 217 aa8.45□□□□□ -1.06
KPNA1-208ENST00000485027 TOP2AP11388 1531 aaKnown RBP8.44□□□□□ -1.06
KPNA1-208ENST00000485027 GRXCR2A6NFK2 248 aa8.44□□□□□ -1.06
KPNA1-208ENST00000485027 TAGLNQ01995 201 aaKnown RBP8.44□□□□□ -1.06
KPNA1-208ENST00000485027 GORABQ5T7V8 394 aa8.44□□□□□ -1.06
KPNA1-208ENST00000485027 PALM3A6NDB9 673 aaPredicted RBP8.43□□□□□ -1.06
KPNA1-208ENST00000485027 SPDYE16A6NNV3 312 aaPredicted RBP8.43□□□□□ -1.06
KPNA1-208ENST00000485027 CENPBP07199 599 aaPredicted RBP8.43□□□□□ -1.06
KPNA1-208ENST00000485027 LMOD1P29536 600 aaPredicted RBP8.43□□□□□ -1.06
KPNA1-208ENST00000485027 SSTR3P32745 418 aaPredicted RBP8.43□□□□□ -1.06
KPNA1-208ENST00000485027 PSEN1P49768 467 aa8.43□□□□□ -1.06
KPNA1-208ENST00000485027 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
KPNA1-208ENST00000485027 PKNOX2Q96KN3 472 aa8.43□□□□□ -1.06
KPNA1-208ENST00000485027 CREBZFQ9NS37 354 aa8.43□□□□□ -1.06
KPNA1-208ENST00000485027 NESP48681 1621 aa8.43□□□□□ -1.06
KPNA1-208ENST00000485027 NPAS4Q8IUM7 802 aa8.43□□□□□ -1.06
KPNA1-208ENST00000485027 DNAJC2Q99543 621 aaKnown RBP8.43□□□□□ -1.06
KPNA1-208ENST00000485027 KIF21AQ7Z4S6 1674 aa8.42□□□□□ -1.06
KPNA1-208ENST00000485027 LAMC3Q9Y6N6 1575 aa8.42□□□□□ -1.06
KPNA1-208ENST00000485027 ATG7O95352 703 aa8.42□□□□□ -1.06
KPNA1-208ENST00000485027 MAP4K4O95819 1239 aaPredicted RBP8.42□□□□□ -1.06
KPNA1-208ENST00000485027 C7P10643 843 aa8.42□□□□□ -1.06
KPNA1-208ENST00000485027 VAMP1P23763 118 aa8.42□□□□□ -1.06
KPNA1-208ENST00000485027 ZNF326Q5BKZ1 582 aaKnown RBP8.42□□□□□ -1.06
KPNA1-208ENST00000485027 PEX14O75381 377 aa8.41□□□□□ -1.06
KPNA1-208ENST00000485027 CLK2P49760 499 aaKnown RBP8.41□□□□□ -1.06
KPNA1-208ENST00000485027 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
KPNA1-208ENST00000485027 HSP90AB4PQ58FF6 505 aa8.41□□□□□ -1.06
KPNA1-208ENST00000485027 LARGE2Q8N3Y3 721 aa8.41□□□□□ -1.06
KPNA1-208ENST00000485027 CCER1Q8TC90 406 aaPredicted RBP8.41□□□□□ -1.06
KPNA1-208ENST00000485027 FCHSD2O94868 740 aa8.4□□□□□ -1.06
KPNA1-208ENST00000485027 ANAPC15P60006 121 aa8.4□□□□□ -1.06
KPNA1-208ENST00000485027 PPP1R15BQ5SWA1 713 aa8.4□□□□□ -1.06
KPNA1-208ENST00000485027 PHOX2BQ99453 314 aa8.4□□□□□ -1.06
KPNA1-208ENST00000485027 LNPKQ9C0E8 428 aa8.4□□□□□ -1.06
KPNA1-208ENST00000485027 PRDM2Q13029 1718 aa8.4□□□□□ -1.06
KPNA1-208ENST00000485027 SGSM3Q96HU1 749 aa8.4□□□□□ -1.07
KPNA1-208ENST00000485027 MS4A4AQ96JQ5 239 aa8.4□□□□□ -1.07
KPNA1-208ENST00000485027 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.07
KPNA1-208ENST00000485027 MAFGO15525 162 aa8.39□□□□□ -1.07
KPNA1-208ENST00000485027 PARNO95453 639 aaKnown RBP8.39□□□□□ -1.07
KPNA1-208ENST00000485027 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
KPNA1-208ENST00000485027 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
KPNA1-208ENST00000485027 ANKRD33BA6NCL7 494 aa8.38□□□□□ -1.07
KPNA1-208ENST00000485027 OSBPP22059 807 aa8.38□□□□□ -1.07
KPNA1-208ENST00000485027 CLCN1P35523 988 aa8.38□□□□□ -1.07
KPNA1-208ENST00000485027 FAM50AQ14320 339 aaKnown RBP8.38□□□□□ -1.07
KPNA1-208ENST00000485027 UCN2Q96RP3 112 aa8.38□□□□□ -1.07
KPNA1-208ENST00000485027 THOC2Q8NI27 1593 aaKnown RBP8.38□□□□□ -1.07
KPNA1-208ENST00000485027 APBB1IPQ7Z5R6 666 aaPredicted RBP8.38□□□□□ -1.07
KPNA1-208ENST00000485027 PLCD4Q9BRC7 762 aa8.38□□□□□ -1.07
KPNA1-208ENST00000485027 SOX12O15370 315 aa8.37□□□□□ -1.07
KPNA1-208ENST00000485027 ERCC5P28715 1186 aaPredicted RBP8.37□□□□□ -1.07
KPNA1-208ENST00000485027 MARSP56192 900 aaKnown RBP8.37□□□□□ -1.07
KPNA1-208ENST00000485027 SETQ01105 290 aaPredicted RBP8.37□□□□□ -1.07
KPNA1-208ENST00000485027 NOP9Q86U38 636 aaKnown RBP8.37□□□□□ -1.07
KPNA1-208ENST00000485027 EVI5LQ96CN4 794 aa8.37□□□□□ -1.07
KPNA1-208ENST00000485027 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
KPNA1-208ENST00000485027 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
KPNA1-208ENST00000485027 EGFLAMQ63HQ2 1017 aa8.36□□□□□ -1.07
KPNA1-208ENST00000485027 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
KPNA1-208ENST00000485027 TSNAXIP1Q2TAA8 658 aa8.36□□□□□ -1.07
KPNA1-208ENST00000485027 PPP2R2DQ66LE6 453 aa8.36□□□□□ -1.07
KPNA1-208ENST00000485027 SPTY2D1Q68D10 685 aaPredicted RBP8.36□□□□□ -1.07
KPNA1-208ENST00000485027 LIMD1Q9UGP4 676 aa8.36□□□□□ -1.07
KPNA1-208ENST00000485027 TLDC2A0PJX2 215 aa8.35□□□□□ -1.07
KPNA1-208ENST00000485027 SOWAHDA6NJG2 315 aa8.35□□□□□ -1.07
KPNA1-208ENST00000485027 PSME1Q06323 249 aa8.35□□□□□ -1.07
KPNA1-208ENST00000485027 FOXD4L6Q3SYB3 417 aaPredicted RBP8.35□□□□□ -1.07
KPNA1-208ENST00000485027 C9orf131Q5VYM1 1079 aa8.35□□□□□ -1.07
KPNA1-208ENST00000485027 B4GALNT3Q6L9W6 998 aa8.35□□□□□ -1.07
KPNA1-208ENST00000485027 FOXD4L3Q6VB84 417 aaPredicted RBP8.35□□□□□ -1.07
KPNA1-208ENST00000485027 SPACA7Q96KW9 195 aa8.35□□□□□ -1.07
KPNA1-208ENST00000485027 LAS1LQ9Y4W2 734 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms